RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-208ENST00000557702 NBPF12Q5TAG4 269 aaPredicted RBP12.33□□□□□ -0.44
PABPN1-208ENST00000557702 TTLL5Q6EMB2 1281 aa12.33□□□□□ -0.44
PABPN1-208ENST00000557702 FAM43AQ8N2R8 423 aa12.33□□□□□ -0.44
PABPN1-208ENST00000557702 PLBD2Q8NHP8 589 aa12.33□□□□□ -0.44
PABPN1-208ENST00000557702 U2AF1L4Q8WU68 220 aaKnown RBP12.33□□□□□ -0.44
PABPN1-208ENST00000557702 TRIM47Q96LD4 638 aa12.33□□□□□ -0.44
PABPN1-208ENST00000557702 GDF15Q99988 308 aa12.33□□□□□ -0.44
PABPN1-208ENST00000557702 COA1Q9GZY4 146 aa12.33□□□□□ -0.44
PABPN1-208ENST00000557702 RIPOR2Q9Y4F9 1068 aa12.33□□□□□ -0.44
PABPN1-208ENST00000557702 SSC5DA1L4H1 1573 aa12.32□□□□□ -0.44
PABPN1-208ENST00000557702 MYO1BO43795 1136 aa12.32□□□□□ -0.44
PABPN1-208ENST00000557702 COL9A1P20849 921 aa12.32□□□□□ -0.44
PABPN1-208ENST00000557702 ANKRD18AQ8IVF6 992 aa12.32□□□□□ -0.44
PABPN1-208ENST00000557702 HELBQ8NG08 1087 aaPredicted RBP12.32□□□□□ -0.44
PABPN1-208ENST00000557702 SRRDQ9UH36 339 aa12.32□□□□□ -0.44
PABPN1-208ENST00000557702 ZNF804BA4D1E1 1349 aa12.32□□□□□ -0.44
PABPN1-208ENST00000557702 MED23Q9ULK4 1368 aa12.31□□□□□ -0.44
PABPN1-208ENST00000557702 ECM2O94769 699 aaPredicted RBP12.31□□□□□ -0.44
PABPN1-208ENST00000557702 SGPL1O95470 568 aa12.31□□□□□ -0.44
PABPN1-208ENST00000557702 CAPN2P17655 700 aa12.31□□□□□ -0.44
PABPN1-208ENST00000557702 BCAMP50895 628 aa12.31□□□□□ -0.44
PABPN1-208ENST00000557702 PSMC4P43686 418 aa12.3□□□□□ -0.44
PABPN1-208ENST00000557702 TRIM28Q13263 835 aaKnown RBP12.3□□□□□ -0.44
PABPN1-208ENST00000557702 ZBTB38Q8NAP3 1195 aaPredicted RBP12.3□□□□□ -0.44
PABPN1-208ENST00000557702 MTMR14Q8NCE2 650 aa12.3□□□□□ -0.44
PABPN1-208ENST00000557702 VEZTQ9HBM0 779 aa12.3□□□□□ -0.44
PABPN1-208ENST00000557702 ZCCHC17Q9NP64 241 aaKnown RBP12.3□□□□□ -0.44
PABPN1-208ENST00000557702 RPTORQ8N122 1335 aa12.3□□□□□ -0.44
PABPN1-208ENST00000557702 CLRN2A0PK11 232 aa12.29□□□□□ -0.44
PABPN1-208ENST00000557702 FMNL1O95466 1100 aaPredicted RBP12.29□□□□□ -0.44
PABPN1-208ENST00000557702 TFRCP02786 760 aaKnown RBP12.29□□□□□ -0.44
PABPN1-208ENST00000557702 GTF2IP78347 998 aa12.29□□□□□ -0.44
PABPN1-208ENST00000557702 TDHQ8IZJ6 230 aa12.29□□□□□ -0.44
PABPN1-208ENST00000557702 CNKSR2Q8WXI2 1034 aa12.29□□□□□ -0.44
PABPN1-208ENST00000557702 CCDC85AQ96PX6 553 aaPredicted RBP12.29□□□□□ -0.44
PABPN1-208ENST00000557702 PDE8AO60658 829 aa12.28□□□□□ -0.44
PABPN1-208ENST00000557702 CETPP11597 493 aa12.28□□□□□ -0.44
PABPN1-208ENST00000557702 OSBPP22059 807 aa12.28□□□□□ -0.44
PABPN1-208ENST00000557702 RASA3Q14644 834 aa12.28□□□□□ -0.44
PABPN1-208ENST00000557702 CDC5LQ99459 802 aaKnown RBP12.28□□□□□ -0.44
PABPN1-208ENST00000557702 UNC93B1Q9H1C4 597 aa12.28□□□□□ -0.44
PABPN1-208ENST00000557702 MINPP1Q9UNW1 487 aa12.28□□□□□ -0.44
PABPN1-208ENST00000557702 SPTBN5Q9NRC6 3674 aaKnown RBP12.27□□□□□ -0.45
PABPN1-208ENST00000557702 BTBD19C9JJ37 291 aa12.27□□□□□ -0.45
PABPN1-208ENST00000557702 CTGFP29279 349 aa12.27□□□□□ -0.45
PABPN1-208ENST00000557702 CCT4P50991 539 aaKnown RBP12.27□□□□□ -0.45
PABPN1-208ENST00000557702 MAP3K9P80192 1104 aa12.27□□□□□ -0.45
PABPN1-208ENST00000557702 VGLL4Q14135 290 aa12.27□□□□□ -0.45
PABPN1-208ENST00000557702 NFE2L2Q16236 605 aa12.27□□□□□ -0.45
PABPN1-208ENST00000557702 CFAP100Q494V2 611 aa12.27□□□□□ -0.45
PABPN1-208ENST00000557702 C17orf99Q6UX52 265 aa12.27□□□□□ -0.45
PABPN1-208ENST00000557702 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.27□□□□□ -0.45
PABPN1-208ENST00000557702 BSDC1Q9NW68 430 aaPredicted RBP12.27□□□□□ -0.45
PABPN1-208ENST00000557702 ZMYND8Q9ULU4 1186 aaPredicted RBP12.27□□□□□ -0.45
PABPN1-208ENST00000557702 CSADQ9Y600 493 aa12.27□□□□□ -0.45
PABPN1-208ENST00000557702 MYPNQ86TC9 1320 aa12.27□□□□□ -0.45
PABPN1-208ENST00000557702 SPDYE2BA6NHP3 402 aa12.26□□□□□ -0.45
PABPN1-208ENST00000557702 SPDYE6P0CI01 402 aa12.26□□□□□ -0.45
PABPN1-208ENST00000557702 TXNRD3Q86VQ6 643 aa12.26□□□□□ -0.45
PABPN1-208ENST00000557702 C7orf61Q8IZ16 206 aa12.26□□□□□ -0.45
PABPN1-208ENST00000557702 SLAIN1Q8ND83 568 aa12.26□□□□□ -0.45
PABPN1-208ENST00000557702 PAWRQ96IZ0 340 aaKnown RBP12.26□□□□□ -0.45
PABPN1-208ENST00000557702 PRMT6Q96LA8 375 aaPredicted RBP12.26□□□□□ -0.45
PABPN1-208ENST00000557702 BABAM1Q9NWV8 329 aa12.26□□□□□ -0.45
PABPN1-208ENST00000557702 CHPF2Q9P2E5 772 aa12.26□□□□□ -0.45
PABPN1-208ENST00000557702 CPA4Q9UI42 421 aa12.26□□□□□ -0.45
PABPN1-208ENST00000557702 LEMD3Q9Y2U8 911 aa12.26□□□□□ -0.45
PABPN1-208ENST00000557702 PCDHAC2Q9Y5I4 1007 aa12.26□□□□□ -0.45
PABPN1-208ENST00000557702 TTC28Q96AY4 2481 aa12.26□□□□□ -0.45
PABPN1-208ENST00000557702 ZSWIM8A7E2V4 1837 aa12.25□□□□□ -0.45
PABPN1-208ENST00000557702 SNAPC2Q13487 334 aa12.25□□□□□ -0.45
PABPN1-208ENST00000557702 TNFAIP1Q13829 316 aa12.25□□□□□ -0.45
PABPN1-208ENST00000557702 FAM109BQ6ICB4 259 aaPredicted RBP12.25□□□□□ -0.45
PABPN1-208ENST00000557702 NECAB2Q7Z6G3 386 aa12.25□□□□□ -0.45
PABPN1-208ENST00000557702 SYMPKQ92797 1274 aaKnown RBP12.25□□□□□ -0.45
PABPN1-208ENST00000557702 GUCD1Q96NT3 240 aa12.25□□□□□ -0.45
PABPN1-208ENST00000557702 UBE2OQ9C0C9 1292 aaKnown RBP12.25□□□□□ -0.45
PABPN1-208ENST00000557702 IRS2Q9Y4H2 1338 aa12.25□□□□□ -0.45
PABPN1-208ENST00000557702 F8W031 263 aaPredicted RBP12.24□□□□□ -0.45
PABPN1-208ENST00000557702 POTEB2H3BUK9 544 aa12.24□□□□□ -0.45
PABPN1-208ENST00000557702 MAGEA10P43363 369 aaPredicted RBP12.24□□□□□ -0.45
PABPN1-208ENST00000557702 RBM5P52756 815 aaKnown RBP eCLIP12.24□□□□□ -0.451e-6■□□□□ 8
PABPN1-208ENST00000557702 PRKCZQ05513 592 aa12.24□□□□□ -0.45
PABPN1-208ENST00000557702 DEFB118Q96PH6 123 aa12.24□□□□□ -0.45
PABPN1-208ENST00000557702 DLG5Q8TDM6 1919 aa12.23□□□□□ -0.45
PABPN1-208ENST00000557702 SPDYE5A6NIY4 337 aa12.23□□□□□ -0.45
PABPN1-208ENST00000557702 PCCAP05165 728 aaPredicted RBP12.23□□□□□ -0.45
PABPN1-208ENST00000557702 SYN1P17600 705 aa12.23□□□□□ -0.45
PABPN1-208ENST00000557702 FCGRTP55899 365 aa12.23□□□□□ -0.45
PABPN1-208ENST00000557702 RIC3Q7Z5B4 369 aa12.23□□□□□ -0.45
PABPN1-208ENST00000557702 CERS5Q8N5B7 392 aa12.23□□□□□ -0.45
PABPN1-208ENST00000557702 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.23□□□□□ -0.45
PABPN1-208ENST00000557702 PLEKHF1Q96S99 279 aa12.23□□□□□ -0.45
PABPN1-208ENST00000557702 DBF4Q9UBU7 674 aaPredicted RBP12.23□□□□□ -0.45
PABPN1-208ENST00000557702 IRF6O14896 467 aa12.22□□□□□ -0.45
PABPN1-208ENST00000557702 ADCY3O60266 1144 aa12.22□□□□□ -0.45
PABPN1-208ENST00000557702 PPP2R1AP30153 589 aa12.22□□□□□ -0.45
PABPN1-208ENST00000557702 PLA2G5P39877 138 aa12.22□□□□□ -0.45
PABPN1-208ENST00000557702 HDGFL1Q5TGJ6 251 aa12.22□□□□□ -0.45
PABPN1-208ENST00000557702 ERO1BQ86YB8 467 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms