RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 IGF2BP3O00425 579 aaKnown RBP eCLIP15.72■□□□□ 0.11
SNX6-209ENST00000557265 SUPT20HL1Q3ZLR7 823 aa15.72■□□□□ 0.11
SNX6-209ENST00000557265 PRMT6Q96LA8 375 aaPredicted RBP15.72■□□□□ 0.11
SNX6-209ENST00000557265 MYH16Q9H6N6 1097 aa15.72■□□□□ 0.11
SNX6-209ENST00000557265 IRS2Q9Y4H2 1338 aa15.71■□□□□ 0.11
SNX6-209ENST00000557265 MYO1BO43795 1136 aa15.71■□□□□ 0.11
SNX6-209ENST00000557265 FLIIQ13045 1269 aa15.71■□□□□ 0.11
SNX6-209ENST00000557265 CFAP100Q494V2 611 aa15.71■□□□□ 0.11
SNX6-209ENST00000557265 NBPF12Q5TAG4 269 aaPredicted RBP15.71■□□□□ 0.11
SNX6-209ENST00000557265 INTS3Q68E01 1043 aaKnown RBP15.71■□□□□ 0.11
SNX6-209ENST00000557265 C15orf52Q6ZUT6 534 aaKnown RBP15.71■□□□□ 0.11
SNX6-209ENST00000557265 LINS1Q8NG48 757 aa15.71■□□□□ 0.11
SNX6-209ENST00000557265 DNAAF4Q8WXU2 420 aa15.71■□□□□ 0.11
SNX6-209ENST00000557265 VEZTQ9HBM0 779 aa15.71■□□□□ 0.11
SNX6-209ENST00000557265 COL1A1P02452 1464 aaPredicted RBP15.71■□□□□ 0.1
SNX6-209ENST00000557265 POTEFA5A3E0 1075 aa15.7■□□□□ 0.1
SNX6-209ENST00000557265 SPDYE2BA6NHP3 402 aa15.7■□□□□ 0.1
SNX6-209ENST00000557265 UNCXA6NJT0 531 aa15.7■□□□□ 0.1
SNX6-209ENST00000557265 SPDYE6P0CI01 402 aa15.7■□□□□ 0.1
SNX6-209ENST00000557265 FKBP5Q13451 457 aaPredicted RBP15.7■□□□□ 0.1
SNX6-209ENST00000557265 ZNF804AQ7Z570 1209 aa15.7■□□□□ 0.1
SNX6-209ENST00000557265 GCC1Q96CN9 775 aa15.7■□□□□ 0.1
SNX6-209ENST00000557265 JAG2Q9Y219 1238 aa15.7■□□□□ 0.1
SNX6-209ENST00000557265 SSC5DA1L4H1 1573 aa15.7■□□□□ 0.1
SNX6-209ENST00000557265 USP2O75604 605 aaPredicted RBP15.69■□□□□ 0.1
SNX6-209ENST00000557265 IL1R1P14778 569 aa15.69■□□□□ 0.1
SNX6-209ENST00000557265 GJA5P36382 358 aa15.69■□□□□ 0.1
SNX6-209ENST00000557265 IREB2P48200 963 aaKnown RBP15.69■□□□□ 0.1
SNX6-209ENST00000557265 RBM5P52756 815 aaKnown RBP eCLIP15.69■□□□□ 0.1
SNX6-209ENST00000557265 CRHR2Q13324 411 aa15.69■□□□□ 0.1
SNX6-209ENST00000557265 IFIT5Q13325 482 aaKnown RBP15.69■□□□□ 0.1
SNX6-209ENST00000557265 OTUD7BQ6GQQ9 843 aa15.69■□□□□ 0.1
SNX6-209ENST00000557265 CD99L2Q8TCZ2 262 aa15.69■□□□□ 0.1
SNX6-209ENST00000557265 ERO1AQ96HE7 468 aa15.69■□□□□ 0.1
SNX6-209ENST00000557265 PTPN22Q9Y2R2 807 aa15.69■□□□□ 0.1
SNX6-209ENST00000557265 AOX1Q06278 1338 aa15.68■□□□□ 0.1
SNX6-209ENST00000557265 FKBP1AP62942 108 aaKnown RBP15.68■□□□□ 0.1
SNX6-209ENST00000557265 FOXO4P98177 505 aa15.68■□□□□ 0.1
SNX6-209ENST00000557265 RASA3Q14644 834 aa15.68■□□□□ 0.1
SNX6-209ENST00000557265 WWC1Q8IX03 1113 aa15.68■□□□□ 0.1
SNX6-209ENST00000557265 PTPN18Q99952 460 aa15.68■□□□□ 0.1
SNX6-209ENST00000557265 CHMP3Q9Y3E7 222 aa15.68■□□□□ 0.1
SNX6-209ENST00000557265 ZNF646O15015 1829 aaPredicted RBP15.67■□□□□ 0.1
SNX6-209ENST00000557265 CCDC27Q2M243 656 aa15.67■□□□□ 0.1
SNX6-209ENST00000557265 HABP4Q5JVS0 413 aaKnown RBP15.67■□□□□ 0.1
SNX6-209ENST00000557265 ANKRD13AQ8IZ07 590 aa15.67■□□□□ 0.1
SNX6-209ENST00000557265 EFCC1Q9HA90 598 aa15.67■□□□□ 0.1
SNX6-209ENST00000557265 PLIN1O60240 522 aa15.66■□□□□ 0.1
SNX6-209ENST00000557265 SP3Q02447 781 aa15.66■□□□□ 0.1
SNX6-209ENST00000557265 TESPA1A2RU30 521 aaPredicted RBP15.65■□□□□ 0.1
SNX6-209ENST00000557265 EN2P19622 333 aaPredicted RBP15.65■□□□□ 0.1
SNX6-209ENST00000557265 LMBR1LQ6UX01 489 aa15.65■□□□□ 0.1
SNX6-209ENST00000557265 ARMC5Q96C12 935 aa15.65■□□□□ 0.1
SNX6-209ENST00000557265 OPTNQ96CV9 577 aa15.65■□□□□ 0.1
SNX6-209ENST00000557265 ZNF594Q96JF6 807 aaPredicted RBP15.65■□□□□ 0.1
SNX6-209ENST00000557265 ELP3Q9H9T3 547 aa15.65■□□□□ 0.1
SNX6-209ENST00000557265 SPEF2Q9C093 1822 aa15.65■□□□□ 0.1
SNX6-209ENST00000557265 IL16Q14005 1332 aa15.65■□□□□ 0.1
SNX6-209ENST00000557265 F6X3S4 739 aa15.64■□□□□ 0.09
SNX6-209ENST00000557265 CAP1Q01518 475 aa15.64■□□□□ 0.09
SNX6-209ENST00000557265 CCDC57Q2TAC2 916 aa15.64■□□□□ 0.09
SNX6-209ENST00000557265 TAF7LQ5H9L4 462 aa15.64■□□□□ 0.09
SNX6-209ENST00000557265 LDHAL6AQ6ZMR3 332 aa15.64■□□□□ 0.09
SNX6-209ENST00000557265 ZNF70Q9UC06 446 aaPredicted RBP15.64■□□□□ 0.09
SNX6-209ENST00000557265 VAMP4O75379 141 aa15.63■□□□□ 0.09
SNX6-209ENST00000557265 TNFAIP1Q13829 316 aa15.63■□□□□ 0.09
SNX6-209ENST00000557265 SPDYE2Q495Y8 402 aa15.63■□□□□ 0.09
SNX6-209ENST00000557265 CCDC184Q52MB2 194 aa15.63■□□□□ 0.09
SNX6-209ENST00000557265 EPHA10Q5JZY3 1008 aa15.63■□□□□ 0.09
SNX6-209ENST00000557265 MFSD14BQ5SR56 506 aa15.63■□□□□ 0.09
SNX6-209ENST00000557265 BEND3Q5T5X7 828 aa15.63■□□□□ 0.09
SNX6-209ENST00000557265 CDAN1Q8IWY9 1227 aa15.63■□□□□ 0.09
SNX6-209ENST00000557265 MS4A4AQ96JQ5 239 aa15.63■□□□□ 0.09
SNX6-209ENST00000557265 TDRD3Q9H7E2 651 aaKnown RBP15.63■□□□□ 0.09
SNX6-209ENST00000557265 CNNM1Q9NRU3 951 aa15.63■□□□□ 0.09
SNX6-209ENST00000557265 SERPINA10Q9UK55 444 aa15.63■□□□□ 0.09
SNX6-209ENST00000557265 TTF2Q9UNY4 1162 aaKnown RBP15.63■□□□□ 0.09
SNX6-209ENST00000557265 FAM205AQ6ZU69 1335 aa15.63■□□□□ 0.09
SNX6-209ENST00000557265 MYH3P11055 1940 aa15.62■□□□□ 0.09
SNX6-209ENST00000557265 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.62■□□□□ 0.09
SNX6-209ENST00000557265 TDRD7Q8NHU6 1098 aaKnown RBP15.62■□□□□ 0.09
SNX6-209ENST00000557265 CNKSR2Q8WXI2 1034 aa15.62■□□□□ 0.09
SNX6-209ENST00000557265 TEPSINQ96N21 525 aa15.62■□□□□ 0.09
SNX6-209ENST00000557265 FANCIQ9NVI1 1328 aa15.62■□□□□ 0.09
SNX6-209ENST00000557265 HTTP42858 3142 aa15.61■□□□□ 0.09
SNX6-209ENST00000557265 TCP10L2B9ZVM9 353 aa15.61■□□□□ 0.09
SNX6-209ENST00000557265 GYG1P46976 350 aa15.61■□□□□ 0.09
SNX6-209ENST00000557265 DZIP1LQ8IYY4 767 aaKnown RBP15.61■□□□□ 0.09
SNX6-209ENST00000557265 BRI3BPQ8WY22 251 aa15.61■□□□□ 0.09
SNX6-209ENST00000557265 TMEM106CQ9BVX2 250 aa15.61■□□□□ 0.09
SNX6-209ENST00000557265 TMEM39BQ9GZU3 492 aa15.61■□□□□ 0.09
SNX6-209ENST00000557265 CCL15-CCL14A0A0B4J2E2 113 aa15.6■□□□□ 0.09
SNX6-209ENST00000557265 HIBADHP31937 336 aaKnown RBP15.6■□□□□ 0.09
SNX6-209ENST00000557265 MAP3K9P80192 1104 aa15.6■□□□□ 0.09
SNX6-209ENST00000557265 VGLL4Q14135 290 aa15.6■□□□□ 0.09
SNX6-209ENST00000557265 CCL15Q16663 113 aa15.6■□□□□ 0.09
SNX6-209ENST00000557265 ZNF333Q96JL9 665 aa15.6■□□□□ 0.09
SNX6-209ENST00000557265 FAM84BQ96KN1 310 aaPredicted RBP15.6■□□□□ 0.09
SNX6-209ENST00000557265 ZFYVE28Q9HCC9 887 aa15.6■□□□□ 0.09
SNX6-209ENST00000557265 KIAA0100Q14667 2235 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 208 ms