RNA–Protein interactions for RNA: ENST00000556744.1

MARK3-211, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 1,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-211ENST00000556744 ARHGAP45Q92619 1136 aa12□□□□□ -0.49
MARK3-211ENST00000556744 CCDC85AQ96PX6 553 aaPredicted RBP12□□□□□ -0.49
MARK3-211ENST00000556744 MINPP1Q9UNW1 487 aa12□□□□□ -0.49
MARK3-211ENST00000556744 XDHP47989 1333 aa12□□□□□ -0.49
MARK3-211ENST00000556744 ADAMTSL1Q8N6G6 1762 aa12□□□□□ -0.49
MARK3-211ENST00000556744 YDJCA8MPS7 323 aa11.99□□□□□ -0.49
MARK3-211ENST00000556744 NBPF7P0C2Y1 421 aaPredicted RBP11.99□□□□□ -0.49
MARK3-211ENST00000556744 ITGA6P23229 1130 aa11.99□□□□□ -0.49
MARK3-211ENST00000556744 FAM161AQ3B820 660 aa11.99□□□□□ -0.49
MARK3-211ENST00000556744 RABL6Q3YEC7 729 aaPredicted RBP11.99□□□□□ -0.49
MARK3-211ENST00000556744 SMC1BQ8NDV3 1235 aa11.99□□□□□ -0.49
MARK3-211ENST00000556744 EYA3Q99504 573 aa11.99□□□□□ -0.49
MARK3-211ENST00000556744 USP44Q9H0E7 712 aa11.99□□□□□ -0.49
MARK3-211ENST00000556744 SMC4Q9NTJ3 1288 aa11.99□□□□□ -0.49
MARK3-211ENST00000556744 C9orf78Q9NZ63 289 aaPredicted RBP11.99□□□□□ -0.49
MARK3-211ENST00000556744 ZBED9Q6R2W3 1325 aa11.99□□□□□ -0.49
MARK3-211ENST00000556744 C6orf229H3BNL8 230 aa11.98□□□□□ -0.49
MARK3-211ENST00000556744 ATP2B4P23634 1241 aa11.98□□□□□ -0.49
MARK3-211ENST00000556744 SCNN1DP51172 638 aa11.98□□□□□ -0.49
MARK3-211ENST00000556744 HNRNPUQ00839 825 aaKnown RBP eCLIP11.98□□□□□ -0.49
MARK3-211ENST00000556744 SLC4A10Q6U841 1118 aa11.98□□□□□ -0.49
MARK3-211ENST00000556744 LMBR1LQ6UX01 489 aa11.98□□□□□ -0.49
MARK3-211ENST00000556744 PARP9Q8IXQ6 854 aa11.98□□□□□ -0.49
MARK3-211ENST00000556744 BCL2L13Q9BXK5 485 aa11.98□□□□□ -0.49
MARK3-211ENST00000556744 HACL1Q9UJ83 578 aa11.98□□□□□ -0.49
MARK3-211ENST00000556744 GGA1Q9UJY5 639 aa11.98□□□□□ -0.49
MARK3-211ENST00000556744 ZNF609O15014 1411 aa11.97□□□□□ -0.49
MARK3-211ENST00000556744 ANKRD18BA2A2Z9 1011 aa11.97□□□□□ -0.49
MARK3-211ENST00000556744 EPHX2P34913 555 aa11.97□□□□□ -0.49
MARK3-211ENST00000556744 IGHMBP2P38935 993 aaKnown RBP11.97□□□□□ -0.49
MARK3-211ENST00000556744 TTLL12Q14166 644 aaPredicted RBP11.97□□□□□ -0.49
MARK3-211ENST00000556744 TNIP1Q15025 636 aa11.97□□□□□ -0.49
MARK3-211ENST00000556744 CIAPIN1Q6FI81 312 aa11.97□□□□□ -0.49
MARK3-211ENST00000556744 GPR153Q6NV75 609 aa11.97□□□□□ -0.49
MARK3-211ENST00000556744 DDRGK1Q96HY6 314 aa11.97□□□□□ -0.49
MARK3-211ENST00000556744 SUCLG2Q96I99 432 aa11.97□□□□□ -0.49
MARK3-211ENST00000556744 API5Q9BZZ5 524 aaKnown RBP11.97□□□□□ -0.49
MARK3-211ENST00000556744 ZC3H12CQ9C0D7 883 aaKnown RBP11.97□□□□□ -0.49
MARK3-211ENST00000556744 NOB1Q9ULX3 412 aaKnown RBP11.97□□□□□ -0.49
MARK3-211ENST00000556744 LEMD3Q9Y2U8 911 aa11.97□□□□□ -0.49
MARK3-211ENST00000556744 SCN9AQ15858 1988 aa11.96□□□□□ -0.49
MARK3-211ENST00000556744 IRS2Q9Y4H2 1338 aa11.96□□□□□ -0.49
MARK3-211ENST00000556744 SNPHO15079 494 aa11.96□□□□□ -0.49
MARK3-211ENST00000556744 UFL1O94874 794 aa11.96□□□□□ -0.49
MARK3-211ENST00000556744 CCT4P50991 539 aaKnown RBP11.96□□□□□ -0.49
MARK3-211ENST00000556744 APLP1P51693 650 aa11.96□□□□□ -0.49
MARK3-211ENST00000556744 IFIT5Q13325 482 aaKnown RBP11.96□□□□□ -0.49
MARK3-211ENST00000556744 C6orf132Q5T0Z8 1188 aa11.96□□□□□ -0.49
MARK3-211ENST00000556744 C15orf52Q6ZUT6 534 aaKnown RBP11.96□□□□□ -0.49
MARK3-211ENST00000556744 PNMA8AQ86V59 439 aaPredicted RBP11.96□□□□□ -0.49
MARK3-211ENST00000556744 LDHDQ86WU2 507 aa11.96□□□□□ -0.49
MARK3-211ENST00000556744 DPF2Q92785 391 aa11.96□□□□□ -0.49
MARK3-211ENST00000556744 ANKRD2Q9GZV1 360 aa11.96□□□□□ -0.49
MARK3-211ENST00000556744 GPRC5DQ9NZD1 345 aa11.96□□□□□ -0.49
MARK3-211ENST00000556744 ANKIB1Q9P2G1 1089 aa11.96□□□□□ -0.49
MARK3-211ENST00000556744 PSME4Q14997 1843 aa11.95□□□□□ -0.5
MARK3-211ENST00000556744 SPEF2Q9C093 1822 aa11.95□□□□□ -0.5
MARK3-211ENST00000556744 MED23Q9ULK4 1368 aa11.95□□□□□ -0.5
MARK3-211ENST00000556744 KIF16BQ96L93 1317 aa11.95□□□□□ -0.5
MARK3-211ENST00000556744 WTIPA6NIX2 430 aaPredicted RBP11.95□□□□□ -0.5
MARK3-211ENST00000556744 VIL1P09327 827 aaKnown RBP11.95□□□□□ -0.5
MARK3-211ENST00000556744 EPS15P42566 896 aa11.95□□□□□ -0.5
MARK3-211ENST00000556744 INTS3Q68E01 1043 aaKnown RBP11.95□□□□□ -0.5
MARK3-211ENST00000556744 PODNQ7Z5L7 613 aa11.95□□□□□ -0.5
MARK3-211ENST00000556744 DNAJC5GQ8N7S2 189 aa11.95□□□□□ -0.5
MARK3-211ENST00000556744 ANKRD44Q8N8A2 993 aa11.95□□□□□ -0.5
MARK3-211ENST00000556744 KHSRPQ92945 711 aaKnown RBP eCLIP11.95□□□□□ -0.5
MARK3-211ENST00000556744 PGAP2Q9UHJ9 254 aa11.95□□□□□ -0.5
MARK3-211ENST00000556744 GJA3Q9Y6H8 435 aa11.95□□□□□ -0.5
MARK3-211ENST00000556744 ECE2O60344 883 aa11.94□□□□□ -0.5
MARK3-211ENST00000556744 RAD17O75943 681 aa11.94□□□□□ -0.5
MARK3-211ENST00000556744 ITGBL1O95965 494 aaPredicted RBP11.94□□□□□ -0.5
MARK3-211ENST00000556744 CCDC57Q2TAC2 916 aa11.94□□□□□ -0.5
MARK3-211ENST00000556744 USP50Q70EL3 339 aaPredicted RBP11.94□□□□□ -0.5
MARK3-211ENST00000556744 GPR101Q96P66 508 aaPredicted RBP11.94□□□□□ -0.5
MARK3-211ENST00000556744 MPHOSPH8Q99549 860 aa11.94□□□□□ -0.5
MARK3-211ENST00000556744 DBNDD1Q9H9R9 158 aa11.94□□□□□ -0.5
MARK3-211ENST00000556744 KCNQ5Q9NR82 932 aa11.94□□□□□ -0.5
MARK3-211ENST00000556744 A0A1B0GUL6 1792 aa11.94□□□□□ -0.5
MARK3-211ENST00000556744 ZNF804BA4D1E1 1349 aa11.93□□□□□ -0.5
MARK3-211ENST00000556744 PASKQ96RG2 1323 aa11.93□□□□□ -0.5
MARK3-211ENST00000556744 PSMD14O00487 310 aa11.93□□□□□ -0.5
MARK3-211ENST00000556744 RPS12P25398 132 aaKnown RBP11.93□□□□□ -0.5
MARK3-211ENST00000556744 GMPSP49915 693 aaPredicted RBP11.93□□□□□ -0.5
MARK3-211ENST00000556744 CHRNDQ07001 517 aa11.93□□□□□ -0.5
MARK3-211ENST00000556744 GMLQ99445 158 aa11.93□□□□□ -0.5
MARK3-211ENST00000556744 FAM117AQ9C073 453 aa11.93□□□□□ -0.5
MARK3-211ENST00000556744 BICC1Q9H694 974 aaKnown RBP11.93□□□□□ -0.5
MARK3-211ENST00000556744 ADARB2Q9NS39 739 aaKnown RBP11.93□□□□□ -0.5
MARK3-211ENST00000556744 RBM27Q9P2N5 1060 aaKnown RBP11.93□□□□□ -0.5
MARK3-211ENST00000556744 RIPOR2Q9Y4F9 1068 aa11.93□□□□□ -0.5
MARK3-211ENST00000556744 ZNF646O15015 1829 aaPredicted RBP11.93□□□□□ -0.5
MARK3-211ENST00000556744 IPO8O15397 1037 aaKnown RBP11.92□□□□□ -0.5
MARK3-211ENST00000556744 BCAR3O75815 825 aa11.92□□□□□ -0.5
MARK3-211ENST00000556744 LMOD1P29536 600 aaPredicted RBP11.92□□□□□ -0.5
MARK3-211ENST00000556744 ATF7IPQ6VMQ6 1270 aa11.92□□□□□ -0.5
MARK3-211ENST00000556744 LDHAL6AQ6ZMR3 332 aa11.92□□□□□ -0.5
MARK3-211ENST00000556744 TXNRD3Q86VQ6 643 aa11.92□□□□□ -0.5
MARK3-211ENST00000556744 OATP04181 439 aa11.91□□□□□ -0.5
MARK3-211ENST00000556744 TRIM27P14373 513 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms