RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 RNF181Q9P0P0 153 aa21.3■■□□□ 1
TUBB3-211ENST00000556536 RASGRF1Q13972 1273 aa21.29■■□□□ 1
TUBB3-211ENST00000556536 PODNQ7Z5L7 613 aa21.29■■□□□ 1
TUBB3-211ENST00000556536 JDP2Q8WYK2 163 aa21.29■■□□□ 1
TUBB3-211ENST00000556536 ZNF512BQ96KM6 892 aaPredicted RBP21.29■■□□□ 1
TUBB3-211ENST00000556536 GNL3LQ9NVN8 582 aaKnown RBP21.29■■□□□ 1
TUBB3-211ENST00000556536 STAP2Q9UGK3 403 aa21.29■■□□□ 1
TUBB3-211ENST00000556536 ZNRF3Q9ULT6 936 aa21.29■■□□□ 1
TUBB3-211ENST00000556536 JAG2Q9Y219 1238 aa21.29■■□□□ 1
TUBB3-211ENST00000556536 COL1A1P02452 1464 aaPredicted RBP21.28■■□□□ 1
TUBB3-211ENST00000556536 UQCRFS1P1P0C7P4 283 aa21.28■■□□□ 1
TUBB3-211ENST00000556536 ATP5JP18859 108 aa21.28■■□□□ 1
TUBB3-211ENST00000556536 MCAMP43121 646 aa21.28■■□□□ 1
TUBB3-211ENST00000556536 PDE1AP54750 535 aa21.28■■□□□ 1
TUBB3-211ENST00000556536 PI16Q6UXB8 463 aa21.28■■□□□ 1
TUBB3-211ENST00000556536 GPATCH3Q96I76 525 aa21.28■■□□□ 1
TUBB3-211ENST00000556536 FRAT2O75474 233 aaPredicted RBP21.27■■□□□ 1
TUBB3-211ENST00000556536 CHAF1AQ13111 956 aaPredicted RBP21.27■■□□□ 1
TUBB3-211ENST00000556536 PI4K2BQ8TCG2 481 aa21.27■■□□□ 1
TUBB3-211ENST00000556536 SNRKQ9NRH2 765 aa21.27■■□□□ 1
TUBB3-211ENST00000556536 HMG20BQ9P0W2 317 aa21.27■■□□□ 1
TUBB3-211ENST00000556536 NDUFB9Q9Y6M9 179 aa21.27■■□□□ 1
TUBB3-211ENST00000556536 TTC41PQ6P2S7 1318 aa21.27■□□□□ 0.99
TUBB3-211ENST00000556536 FZD9O00144 591 aa21.26■□□□□ 0.99
TUBB3-211ENST00000556536 RAD17O75943 681 aa21.26■□□□□ 0.99
TUBB3-211ENST00000556536 GTF2IP78347 998 aa21.26■□□□□ 0.99
TUBB3-211ENST00000556536 BOLA2Q9H3K6 86 aa21.26■□□□□ 0.99
TUBB3-211ENST00000556536 RRAGCQ9HB90 399 aa21.26■□□□□ 0.99
TUBB3-211ENST00000556536 SEMA3EO15041 775 aa21.25■□□□□ 0.99
TUBB3-211ENST00000556536 ZBTB22O15209 634 aa21.25■□□□□ 0.99
TUBB3-211ENST00000556536 SPATA5Q8NB90 893 aa21.25■□□□□ 0.99
TUBB3-211ENST00000556536 SMC1BQ8NDV3 1235 aa21.25■□□□□ 0.99
TUBB3-211ENST00000556536 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.25■□□□□ 0.99
TUBB3-211ENST00000556536 FBXW7Q969H0 707 aa21.25■□□□□ 0.99
TUBB3-211ENST00000556536 DENND2AQ9ULE3 1009 aa21.25■□□□□ 0.99
TUBB3-211ENST00000556536 ZAP70P43403 619 aa21.24■□□□□ 0.99
TUBB3-211ENST00000556536 CXCL9Q07325 125 aa21.24■□□□□ 0.99
TUBB3-211ENST00000556536 MXD3Q9BW11 206 aa21.24■□□□□ 0.99
TUBB3-211ENST00000556536 OSBPL3Q9H4L5 887 aa21.24■□□□□ 0.99
TUBB3-211ENST00000556536 FAM205AQ6ZU69 1335 aa21.24■□□□□ 0.99
TUBB3-211ENST00000556536 ZNF541Q9H0D2 1346 aa21.24■□□□□ 0.99
TUBB3-211ENST00000556536 USP17L3A6NCW0 530 aa21.23■□□□□ 0.99
TUBB3-211ENST00000556536 USP17L4A6NCW7 530 aa21.23■□□□□ 0.99
TUBB3-211ENST00000556536 RGS3P49796 1198 aa21.23■□□□□ 0.99
TUBB3-211ENST00000556536 DACT2Q5SW24 774 aa21.23■□□□□ 0.99
TUBB3-211ENST00000556536 TTLL5Q6EMB2 1281 aa21.23■□□□□ 0.99
TUBB3-211ENST00000556536 USP17L1Q7RTZ2 530 aa21.23■□□□□ 0.99
TUBB3-211ENST00000556536 TNS4Q8IZW8 715 aa21.23■□□□□ 0.99
TUBB3-211ENST00000556536 HAUS7Q99871 368 aa21.23■□□□□ 0.99
TUBB3-211ENST00000556536 AOX1Q06278 1338 aa21.23■□□□□ 0.99
TUBB3-211ENST00000556536 ZC3H4Q9UPT8 1303 aaKnown RBP21.23■□□□□ 0.99
TUBB3-211ENST00000556536 PSMD14O00487 310 aa21.22■□□□□ 0.99
TUBB3-211ENST00000556536 ERC2O15083 957 aa21.22■□□□□ 0.99
TUBB3-211ENST00000556536 GLRX3O76003 335 aaKnown RBP21.22■□□□□ 0.99
TUBB3-211ENST00000556536 EIF6P56537 245 aaKnown RBP21.22■□□□□ 0.99
TUBB3-211ENST00000556536 STRIP1Q5VSL9 837 aa21.22■□□□□ 0.99
TUBB3-211ENST00000556536 EDC3Q96F86 508 aaKnown RBP21.22■□□□□ 0.99
TUBB3-211ENST00000556536 DNAJC2Q99543 621 aaKnown RBP21.22■□□□□ 0.99
TUBB3-211ENST00000556536 PDS5AQ29RF7 1337 aaKnown RBP21.22■□□□□ 0.99
TUBB3-211ENST00000556536 CAPN15O75808 1086 aa21.21■□□□□ 0.99
TUBB3-211ENST00000556536 MAP4K4O95819 1239 aaPredicted RBP21.21■□□□□ 0.99
TUBB3-211ENST00000556536 CYP2E1P05181 493 aaPredicted RBP21.21■□□□□ 0.99
TUBB3-211ENST00000556536 CIAPIN1Q6FI81 312 aa21.21■□□□□ 0.99
TUBB3-211ENST00000556536 TBC1D9Q6ZT07 1266 aa21.21■□□□□ 0.99
TUBB3-211ENST00000556536 CERS5Q8N5B7 392 aa21.21■□□□□ 0.99
TUBB3-211ENST00000556536 ANTXR1Q9H6X2 564 aa21.21■□□□□ 0.99
TUBB3-211ENST00000556536 SBF1O95248 1867 aa21.21■□□□□ 0.99
TUBB3-211ENST00000556536 VIL1P09327 827 aaKnown RBP21.2■□□□□ 0.98
TUBB3-211ENST00000556536 GRIK5Q16478 980 aa21.2■□□□□ 0.98
TUBB3-211ENST00000556536 WDR66Q8TBY9 1149 aa21.2■□□□□ 0.98
TUBB3-211ENST00000556536 PIH1D3Q9NQM4 214 aaKnown RBP21.2■□□□□ 0.98
TUBB3-211ENST00000556536 GOLIM4O00461 696 aa21.19■□□□□ 0.98
TUBB3-211ENST00000556536 TNIP1Q15025 636 aa21.19■□□□□ 0.98
TUBB3-211ENST00000556536 MFSD14BQ5SR56 506 aa21.19■□□□□ 0.98
TUBB3-211ENST00000556536 ZBTB12Q9Y330 459 aaPredicted RBP21.19■□□□□ 0.98
TUBB3-211ENST00000556536 GJA3Q9Y6H8 435 aa21.19■□□□□ 0.98
TUBB3-211ENST00000556536 SCN9AQ15858 1988 aa21.19■□□□□ 0.98
TUBB3-211ENST00000556536 GSPT1P15170 499 aaKnown RBP21.18■□□□□ 0.98
TUBB3-211ENST00000556536 TTC22Q5TAA0 569 aa21.18■□□□□ 0.98
TUBB3-211ENST00000556536 RSBN1LQ6PCB5 846 aaPredicted RBP21.18■□□□□ 0.98
TUBB3-211ENST00000556536 PAG1Q9NWQ8 432 aa21.18■□□□□ 0.98
TUBB3-211ENST00000556536 SALL1Q9NSC2 1324 aa21.18■□□□□ 0.98
TUBB3-211ENST00000556536 TBC1D22AQ8WUA7 517 aa21.17■□□□□ 0.98
TUBB3-211ENST00000556536 ABCF2Q9UG63 623 aa21.17■□□□□ 0.98
TUBB3-211ENST00000556536 CCDC88AQ3V6T2 1871 aa21.16■□□□□ 0.98
TUBB3-211ENST00000556536 TIAM2Q8IVF5 1701 aa21.16■□□□□ 0.98
TUBB3-211ENST00000556536 VEGFAP15692 232 aaPredicted RBP21.16■□□□□ 0.98
TUBB3-211ENST00000556536 FKBP1AP62942 108 aaKnown RBP21.16■□□□□ 0.98
TUBB3-211ENST00000556536 GMLQ99445 158 aa21.16■□□□□ 0.98
TUBB3-211ENST00000556536 GLTPD2A6NH11 291 aa21.15■□□□□ 0.98
TUBB3-211ENST00000556536 DDNO94850 711 aaPredicted RBP21.15■□□□□ 0.98
TUBB3-211ENST00000556536 PRDX5P30044 214 aa21.15■□□□□ 0.98
TUBB3-211ENST00000556536 GPC2Q8N158 579 aa21.15■□□□□ 0.98
TUBB3-211ENST00000556536 AKAP11Q9UKA4 1901 aa21.15■□□□□ 0.98
TUBB3-211ENST00000556536 DICER1Q9UPY3 1922 aaKnown RBP21.15■□□□□ 0.98
TUBB3-211ENST00000556536 F8W031 263 aaPredicted RBP21.14■□□□□ 0.97
TUBB3-211ENST00000556536 GMPSP49915 693 aaPredicted RBP21.14■□□□□ 0.97
TUBB3-211ENST00000556536 LRP2BPQ9P2M1 347 aa21.14■□□□□ 0.97
TUBB3-211ENST00000556536 ZNF646O15015 1829 aaPredicted RBP21.13■□□□□ 0.97
TUBB3-211ENST00000556536 TRIM6-TRIM34B2RNG4 842 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms