RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 CHMP4AQ9BY43 222 aa17.89■□□□□ 0.45
ACTN1-219ENST00000556432 ADAMTS8Q9UP79 889 aa17.89■□□□□ 0.45
ACTN1-219ENST00000556432 COLQQ9Y215 455 aaPredicted RBP17.89■□□□□ 0.45
ACTN1-219ENST00000556432 MYH3P11055 1940 aa17.89■□□□□ 0.45
ACTN1-219ENST00000556432 MYBBP1AQ9BQG0 1328 aaKnown RBP17.89■□□□□ 0.45
ACTN1-219ENST00000556432 CEP290O15078 2479 aa17.89■□□□□ 0.45
ACTN1-219ENST00000556432 MYCP01106 439 aaPredicted RBP17.88■□□□□ 0.45
ACTN1-219ENST00000556432 ZNF853P0CG23 659 aa17.88■□□□□ 0.45
ACTN1-219ENST00000556432 ITGA6P23229 1130 aa17.88■□□□□ 0.45
ACTN1-219ENST00000556432 ARHGEF6Q15052 776 aa17.88■□□□□ 0.45
ACTN1-219ENST00000556432 CWF19L2Q2TBE0 894 aaKnown RBP17.88■□□□□ 0.45
ACTN1-219ENST00000556432 NBPF12Q5TAG4 269 aaPredicted RBP17.88■□□□□ 0.45
ACTN1-219ENST00000556432 KSR2Q6VAB6 950 aa17.88■□□□□ 0.45
ACTN1-219ENST00000556432 NBPF11Q86T75 865 aa17.88■□□□□ 0.45
ACTN1-219ENST00000556432 C8orf58Q8NAV2 365 aa17.88■□□□□ 0.45
ACTN1-219ENST00000556432 CD209Q9NNX6 404 aa17.88■□□□□ 0.45
ACTN1-219ENST00000556432 PCDHAC2Q9Y5I4 1007 aa17.88■□□□□ 0.45
ACTN1-219ENST00000556432 GJA5P36382 358 aa17.87■□□□□ 0.45
ACTN1-219ENST00000556432 CFAP100Q494V2 611 aa17.87■□□□□ 0.45
ACTN1-219ENST00000556432 ANKRD13AQ8IZ07 590 aa17.87■□□□□ 0.45
ACTN1-219ENST00000556432 ZNF333Q96JL9 665 aa17.87■□□□□ 0.45
ACTN1-219ENST00000556432 TRIOBPQ9H2D6 2365 aa17.87■□□□□ 0.45
ACTN1-219ENST00000556432 SPDYE2BA6NHP3 402 aa17.86■□□□□ 0.45
ACTN1-219ENST00000556432 UNCXA6NJT0 531 aa17.86■□□□□ 0.45
ACTN1-219ENST00000556432 SPDYE6P0CI01 402 aa17.86■□□□□ 0.45
ACTN1-219ENST00000556432 CERS5Q8N5B7 392 aa17.86■□□□□ 0.45
ACTN1-219ENST00000556432 MTMR14Q8NCE2 650 aa17.86■□□□□ 0.45
ACTN1-219ENST00000556432 PTPN18Q99952 460 aa17.86■□□□□ 0.45
ACTN1-219ENST00000556432 ELP3Q9H9T3 547 aa17.86■□□□□ 0.45
ACTN1-219ENST00000556432 BRCA2P51587 3418 aa17.85■□□□□ 0.45
ACTN1-219ENST00000556432 NEURL1BA8MQ27 555 aa17.85■□□□□ 0.45
ACTN1-219ENST00000556432 CHRNDQ07001 517 aa17.85■□□□□ 0.45
ACTN1-219ENST00000556432 RASA3Q14644 834 aa17.85■□□□□ 0.45
ACTN1-219ENST00000556432 OPTNQ96CV9 577 aa17.85■□□□□ 0.45
ACTN1-219ENST00000556432 STK31Q9BXU1 1019 aa17.85■□□□□ 0.45
ACTN1-219ENST00000556432 JAG2Q9Y219 1238 aa17.85■□□□□ 0.45
ACTN1-219ENST00000556432 PTCH2Q9Y6C5 1203 aa17.85■□□□□ 0.45
ACTN1-219ENST00000556432 USP2O75604 605 aaPredicted RBP17.84■□□□□ 0.45
ACTN1-219ENST00000556432 CAP1Q01518 475 aa17.84■□□□□ 0.45
ACTN1-219ENST00000556432 TAF1CQ15572 869 aaPredicted RBP17.84■□□□□ 0.45
ACTN1-219ENST00000556432 ZNF804AQ7Z570 1209 aa17.84■□□□□ 0.45
ACTN1-219ENST00000556432 PRMT6Q96LA8 375 aaPredicted RBP17.84■□□□□ 0.45
ACTN1-219ENST00000556432 H0YGN5 161 aa17.83■□□□□ 0.44
ACTN1-219ENST00000556432 SNAP23O00161 211 aa17.83■□□□□ 0.44
ACTN1-219ENST00000556432 APAF1O14727 1248 aa17.83■□□□□ 0.44
ACTN1-219ENST00000556432 TAF5LO75529 589 aa17.83■□□□□ 0.44
ACTN1-219ENST00000556432 HELBQ8NG08 1087 aaPredicted RBP17.83■□□□□ 0.44
ACTN1-219ENST00000556432 ZFYVE28Q9HCC9 887 aa17.83■□□□□ 0.44
ACTN1-219ENST00000556432 ECM29Q5VYK3 1845 aa17.82■□□□□ 0.44
ACTN1-219ENST00000556432 LAMB1P07942 1786 aa17.82■□□□□ 0.44
ACTN1-219ENST00000556432 AOX1Q06278 1338 aa17.82■□□□□ 0.44
ACTN1-219ENST00000556432 CCL15-CCL14A0A0B4J2E2 113 aa17.82■□□□□ 0.44
ACTN1-219ENST00000556432 TESPA1A2RU30 521 aaPredicted RBP17.82■□□□□ 0.44
ACTN1-219ENST00000556432 H7C1W4 665 aa17.82■□□□□ 0.44
ACTN1-219ENST00000556432 TNFAIP1Q13829 316 aa17.82■□□□□ 0.44
ACTN1-219ENST00000556432 CCL15Q16663 113 aa17.82■□□□□ 0.44
ACTN1-219ENST00000556432 TSPYL6Q8N831 410 aa17.82■□□□□ 0.44
ACTN1-219ENST00000556432 ANKRD18BA2A2Z9 1011 aa17.81■□□□□ 0.44
ACTN1-219ENST00000556432 WDHD1O75717 1129 aaPredicted RBP17.81■□□□□ 0.44
ACTN1-219ENST00000556432 CHMP3Q9Y3E7 222 aa17.81■□□□□ 0.44
ACTN1-219ENST00000556432 GTF2A2P52657 109 aa17.8■□□□□ 0.44
ACTN1-219ENST00000556432 GCKRQ14397 625 aa17.8■□□□□ 0.44
ACTN1-219ENST00000556432 KIF22Q14807 665 aa17.8■□□□□ 0.44
ACTN1-219ENST00000556432 SH3TC2Q8TF17 1288 aa17.8■□□□□ 0.44
ACTN1-219ENST00000556432 CNKSR2Q8WXI2 1034 aa17.8■□□□□ 0.44
ACTN1-219ENST00000556432 BRI3BPQ8WY22 251 aa17.8■□□□□ 0.44
ACTN1-219ENST00000556432 MS4A4AQ96JQ5 239 aa17.8■□□□□ 0.44
ACTN1-219ENST00000556432 PLA2G12BQ9BX93 195 aa17.8■□□□□ 0.44
ACTN1-219ENST00000556432 MYH16Q9H6N6 1097 aa17.8■□□□□ 0.44
ACTN1-219ENST00000556432 OTOFQ9HC10 1997 aa17.79■□□□□ 0.44
ACTN1-219ENST00000556432 CHRDL2Q6WN34 429 aa17.79■□□□□ 0.44
ACTN1-219ENST00000556432 OTUD5Q96G74 571 aa17.79■□□□□ 0.44
ACTN1-219ENST00000556432 CSADQ9Y600 493 aa17.79■□□□□ 0.44
ACTN1-219ENST00000556432 PLIN1O60240 522 aa17.78■□□□□ 0.44
ACTN1-219ENST00000556432 ECM2O94769 699 aaPredicted RBP17.78■□□□□ 0.44
ACTN1-219ENST00000556432 IL1R1P14778 569 aa17.78■□□□□ 0.44
ACTN1-219ENST00000556432 FKBP1AP62942 108 aaKnown RBP17.78■□□□□ 0.44
ACTN1-219ENST00000556432 IFIT5Q13325 482 aaKnown RBP17.78■□□□□ 0.44
ACTN1-219ENST00000556432 VGLL4Q14135 290 aa17.78■□□□□ 0.44
ACTN1-219ENST00000556432 FAM43AQ8N2R8 423 aa17.78■□□□□ 0.44
ACTN1-219ENST00000556432 ZNF70Q9UC06 446 aaPredicted RBP17.78■□□□□ 0.44
ACTN1-219ENST00000556432 TCP10L2B9ZVM9 353 aa17.77■□□□□ 0.44
ACTN1-219ENST00000556432 CSF1RP07333 972 aa17.77■□□□□ 0.44
ACTN1-219ENST00000556432 SPDYE2Q495Y8 402 aa17.77■□□□□ 0.44
ACTN1-219ENST00000556432 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.77■□□□□ 0.44
ACTN1-219ENST00000556432 C15orf52Q6ZUT6 534 aaKnown RBP17.77■□□□□ 0.44
ACTN1-219ENST00000556432 G2E3Q7L622 706 aa17.77■□□□□ 0.44
ACTN1-219ENST00000556432 DPF3Q92784 378 aa17.77■□□□□ 0.44
ACTN1-219ENST00000556432 TSR2Q969E8 191 aaKnown RBP17.77■□□□□ 0.44
ACTN1-219ENST00000556432 TDRD3Q9H7E2 651 aaKnown RBP17.77■□□□□ 0.44
ACTN1-219ENST00000556432 TTF2Q9UNY4 1162 aaKnown RBP17.77■□□□□ 0.44
ACTN1-219ENST00000556432 IRS2Q9Y4H2 1338 aa17.76■□□□□ 0.43
ACTN1-219ENST00000556432 SLC4A2P04920 1241 aa17.76■□□□□ 0.43
ACTN1-219ENST00000556432 MAP3K9P80192 1104 aa17.76■□□□□ 0.43
ACTN1-219ENST00000556432 DDX10Q13206 875 aaKnown RBP17.76■□□□□ 0.43
ACTN1-219ENST00000556432 TAF7LQ5H9L4 462 aa17.76■□□□□ 0.43
ACTN1-219ENST00000556432 MFSD14BQ5SR56 506 aa17.76■□□□□ 0.43
ACTN1-219ENST00000556432 CDAN1Q8IWY9 1227 aa17.76■□□□□ 0.43
ACTN1-219ENST00000556432 ARHGAP39Q9C0H5 1083 aa17.76■□□□□ 0.43
ACTN1-219ENST00000556432 TMEM39BQ9GZU3 492 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms