RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 NLRP12P59046 1061 aa17.18■□□□□ 0.34
ARHGEF40-207ENST00000556399 ODF2Q5BJF6 829 aa17.18■□□□□ 0.34
ARHGEF40-207ENST00000556399 TDRD7Q8NHU6 1098 aaKnown RBP17.18■□□□□ 0.34
ARHGEF40-207ENST00000556399 MRFAP1L1Q96HT8 127 aa17.18■□□□□ 0.34
ARHGEF40-207ENST00000556399 USP28Q96RU2 1077 aa17.18■□□□□ 0.34
ARHGEF40-207ENST00000556399 KRT23Q9C075 422 aa17.18■□□□□ 0.34
ARHGEF40-207ENST00000556399 STX17P56962 302 aa17.18■□□□□ 0.34
ARHGEF40-207ENST00000556399 MED14O60244 1454 aa17.18■□□□□ 0.34
ARHGEF40-207ENST00000556399 IQSEC2Q5JU85 1478 aa17.18■□□□□ 0.34
ARHGEF40-207ENST00000556399 PPP2R3AQ06190 1150 aa17.17■□□□□ 0.34
ARHGEF40-207ENST00000556399 ZCCHC11Q5TAX3 1644 aaKnown RBP17.17■□□□□ 0.34
ARHGEF40-207ENST00000556399 CHRNA2Q15822 529 aa17.17■□□□□ 0.34
ARHGEF40-207ENST00000556399 CAPN2P17655 700 aa17.17■□□□□ 0.34
ARHGEF40-207ENST00000556399 ATP5JP18859 108 aa17.17■□□□□ 0.34
ARHGEF40-207ENST00000556399 DDIT3P35638 169 aa17.17■□□□□ 0.34
ARHGEF40-207ENST00000556399 GCKRQ14397 625 aa17.17■□□□□ 0.34
ARHGEF40-207ENST00000556399 KRI1Q8N9T8 703 aaKnown RBP17.17■□□□□ 0.34
ARHGEF40-207ENST00000556399 UQCRFS1P1P0C7P4 283 aa17.17■□□□□ 0.34
ARHGEF40-207ENST00000556399 PAFAH1B1P43034 410 aa17.17■□□□□ 0.34
ARHGEF40-207ENST00000556399 ZNF569Q5MCW4 686 aa17.17■□□□□ 0.34
ARHGEF40-207ENST00000556399 NBPF6Q5VWK0 638 aa17.17■□□□□ 0.34
ARHGEF40-207ENST00000556399 TAF4BQ92750 862 aa17.17■□□□□ 0.34
ARHGEF40-207ENST00000556399 NBPF4Q96M43 638 aa17.17■□□□□ 0.34
ARHGEF40-207ENST00000556399 JADE2Q9NQC1 790 aa17.17■□□□□ 0.34
ARHGEF40-207ENST00000556399 ERLIN2O94905 339 aa17.16■□□□□ 0.34
ARHGEF40-207ENST00000556399 GCP02774 474 aa17.16■□□□□ 0.34
ARHGEF40-207ENST00000556399 MTIF2P46199 727 aaKnown RBP17.16■□□□□ 0.34
ARHGEF40-207ENST00000556399 ZNF790Q6PG37 636 aa17.16■□□□□ 0.34
ARHGEF40-207ENST00000556399 CCDC191Q8NCU4 936 aa17.16■□□□□ 0.34
ARHGEF40-207ENST00000556399 CNNM2Q9H8M5 875 aa17.16■□□□□ 0.34
ARHGEF40-207ENST00000556399 VPS18Q9P253 973 aa17.16■□□□□ 0.34
ARHGEF40-207ENST00000556399 CCDC194A0A1B0GVG4 234 aa17.16■□□□□ 0.34
ARHGEF40-207ENST00000556399 IVLP07476 585 aa17.16■□□□□ 0.34
ARHGEF40-207ENST00000556399 CT47A1Q5JQC4 288 aaPredicted RBP17.16■□□□□ 0.34
ARHGEF40-207ENST00000556399 CACNA2D4Q7Z3S7 1137 aa17.16■□□□□ 0.34
ARHGEF40-207ENST00000556399 NUTM2AQ8IVF1 878 aaPredicted RBP17.16■□□□□ 0.34
ARHGEF40-207ENST00000556399 PYM1Q9BRP8 204 aaKnown RBP17.16■□□□□ 0.34
ARHGEF40-207ENST00000556399 BMP2KQ9NSY1 1161 aaPredicted RBP17.16■□□□□ 0.34
ARHGEF40-207ENST00000556399 QRICH2Q9H0J4 1663 aa17.15■□□□□ 0.34
ARHGEF40-207ENST00000556399 A0A1B0GUL7 405 aa17.15■□□□□ 0.34
ARHGEF40-207ENST00000556399 SPAG1Q07617 926 aa17.15■□□□□ 0.34
ARHGEF40-207ENST00000556399 SIRT1Q96EB6 747 aa17.15■□□□□ 0.34
ARHGEF40-207ENST00000556399 DNA2P51530 1060 aa17.15■□□□□ 0.34
ARHGEF40-207ENST00000556399 ERCC6LQ2NKX8 1250 aa17.15■□□□□ 0.34
ARHGEF40-207ENST00000556399 PI4K2BQ8TCG2 481 aa17.15■□□□□ 0.34
ARHGEF40-207ENST00000556399 CACTINQ8WUQ7 758 aaKnown RBP17.15■□□□□ 0.34
ARHGEF40-207ENST00000556399 KIAA1468Q9P260 1216 aa17.15■□□□□ 0.34
ARHGEF40-207ENST00000556399 RNF17Q9BXT8 1623 aaKnown RBP17.15■□□□□ 0.34
ARHGEF40-207ENST00000556399 PNPLA6Q8IY17 1366 aa17.15■□□□□ 0.34
ARHGEF40-207ENST00000556399 LRRC7Q96NW7 1537 aa17.15■□□□□ 0.34
ARHGEF40-207ENST00000556399 TRIM75PA6NK02 468 aa17.15■□□□□ 0.34
ARHGEF40-207ENST00000556399 RHOXF2BP0C7M4 288 aa17.15■□□□□ 0.34
ARHGEF40-207ENST00000556399 ADALQ6DHV7 355 aa17.15■□□□□ 0.34
ARHGEF40-207ENST00000556399 TMTC2Q8N394 836 aa17.15■□□□□ 0.34
ARHGEF40-207ENST00000556399 SEC62Q99442 399 aaKnown RBP17.15■□□□□ 0.34
ARHGEF40-207ENST00000556399 RHOXF2Q9BQY4 288 aa17.15■□□□□ 0.34
ARHGEF40-207ENST00000556399 RSPH14Q9UHP6 348 aa17.15■□□□□ 0.34
ARHGEF40-207ENST00000556399 KCNH3Q9ULD8 1083 aa17.15■□□□□ 0.34
ARHGEF40-207ENST00000556399 NCOA3Q9Y6Q9 1424 aa17.15■□□□□ 0.34
ARHGEF40-207ENST00000556399 GLI2P10070 1586 aa17.15■□□□□ 0.34
ARHGEF40-207ENST00000556399 E7EWF7 191 aa17.14■□□□□ 0.33
ARHGEF40-207ENST00000556399 BMP15O95972 392 aa17.14■□□□□ 0.33
ARHGEF40-207ENST00000556399 KCNA6P17658 529 aa17.14■□□□□ 0.33
ARHGEF40-207ENST00000556399 PIP4K2BP78356 416 aa17.14■□□□□ 0.33
ARHGEF40-207ENST00000556399 EHBP1Q8NDI1 1231 aa17.14■□□□□ 0.33
ARHGEF40-207ENST00000556399 FAM107BQ9H098 131 aa17.14■□□□□ 0.33
ARHGEF40-207ENST00000556399 CAVIN4Q5BKX8 364 aa17.14■□□□□ 0.33
ARHGEF40-207ENST00000556399 TRIM47Q96LD4 638 aa17.14■□□□□ 0.33
ARHGEF40-207ENST00000556399 KDRP35968 1356 aa17.14■□□□□ 0.33
ARHGEF40-207ENST00000556399 AKR1B15C9JRZ8 316 aaPredicted RBP17.14■□□□□ 0.33
ARHGEF40-207ENST00000556399 METP08581 1390 aa17.14■□□□□ 0.33
ARHGEF40-207ENST00000556399 PFKFB2O60825 505 aa17.14■□□□□ 0.33
ARHGEF40-207ENST00000556399 RMND1Q9NWS8 449 aa17.14■□□□□ 0.33
ARHGEF40-207ENST00000556399 EYA2O00167 538 aa17.13■□□□□ 0.33
ARHGEF40-207ENST00000556399 PHACTR2O75167 634 aa17.13■□□□□ 0.33
ARHGEF40-207ENST00000556399 UBA7P41226 1012 aa17.13■□□□□ 0.33
ARHGEF40-207ENST00000556399 UTP14CQ5TAP6 766 aaKnown RBP17.13■□□□□ 0.33
ARHGEF40-207ENST00000556399 TRIM21P19474 475 aaKnown RBP17.13■□□□□ 0.33
ARHGEF40-207ENST00000556399 MATR3P43243 847 aaKnown RBP eCLIP17.13■□□□□ 0.33
ARHGEF40-207ENST00000556399 SLC4A4Q9Y6R1 1079 aa17.13■□□□□ 0.33
ARHGEF40-207ENST00000556399 ARHGAP6O43182 974 aa17.13■□□□□ 0.33
ARHGEF40-207ENST00000556399 TCEAL9Q9UHQ7 104 aa17.13■□□□□ 0.33
ARHGEF40-207ENST00000556399 CKAP4Q07065 602 aaKnown RBP17.13■□□□□ 0.33
ARHGEF40-207ENST00000556399 TBX22Q9Y458 520 aa17.13■□□□□ 0.33
ARHGEF40-207ENST00000556399 CFAP74Q9C0B2 1584 aa17.12■□□□□ 0.33
ARHGEF40-207ENST00000556399 GIGYF1O75420 1035 aaPredicted RBP17.12■□□□□ 0.33
ARHGEF40-207ENST00000556399 TDRD12Q587J7 1177 aaKnown RBP17.12■□□□□ 0.33
ARHGEF40-207ENST00000556399 CCDC43Q96MW1 224 aaKnown RBP17.12■□□□□ 0.33
ARHGEF40-207ENST00000556399 ALS2CR12Q96Q35 445 aa17.12■□□□□ 0.33
ARHGEF40-207ENST00000556399 DSCC1Q9BVC3 393 aa17.12■□□□□ 0.33
ARHGEF40-207ENST00000556399 TAF5LO75529 589 aa17.12■□□□□ 0.33
ARHGEF40-207ENST00000556399 CDC25BP30305 580 aa17.12■□□□□ 0.33
ARHGEF40-207ENST00000556399 IKQ13123 557 aaPredicted RBP17.12■□□□□ 0.33
ARHGEF40-207ENST00000556399 NEURL1BA8MQ27 555 aa17.12■□□□□ 0.33
ARHGEF40-207ENST00000556399 ATP2B2Q01814 1243 aa17.12■□□□□ 0.33
ARHGEF40-207ENST00000556399 KRBA2Q6ZNG9 492 aa17.12■□□□□ 0.33
ARHGEF40-207ENST00000556399 IGSF1Q8N6C5 1336 aa17.12■□□□□ 0.33
ARHGEF40-207ENST00000556399 TUBB4BP68371 445 aa17.11■□□□□ 0.33
ARHGEF40-207ENST00000556399 SCRN1Q12765 414 aa17.11■□□□□ 0.33
ARHGEF40-207ENST00000556399 KLHL34Q8N239 644 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms