RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 ZSWIM6Q9HCJ5 1215 aa11.38□□□□□ -0.59
HNRNPC-223ENST00000556142 HMG20BQ9P0W2 317 aa11.38□□□□□ -0.59
HNRNPC-223ENST00000556142 WWC3Q9ULE0 1092 aa11.38□□□□□ -0.59
HNRNPC-223ENST00000556142 AKAP11Q9UKA4 1901 aa11.38□□□□□ -0.59
HNRNPC-223ENST00000556142 TNRC6CQ9HCJ0 1690 aaKnown RBP11.38□□□□□ -0.59
HNRNPC-223ENST00000556142 WTIPA6NIX2 430 aaPredicted RBP11.37□□□□□ -0.59
HNRNPC-223ENST00000556142 M0R2C6 588 aa11.37□□□□□ -0.59
HNRNPC-223ENST00000556142 ZFYP08048 801 aaPredicted RBP11.37□□□□□ -0.59
HNRNPC-223ENST00000556142 NFKBIBQ15653 356 aa11.37□□□□□ -0.59
HNRNPC-223ENST00000556142 DSCC1Q9BVC3 393 aa11.37□□□□□ -0.59
HNRNPC-223ENST00000556142 UPF3BQ9BZI7 483 aaKnown RBP11.37□□□□□ -0.59
HNRNPC-223ENST00000556142 PIH1D3Q9NQM4 214 aaKnown RBP11.37□□□□□ -0.59
HNRNPC-223ENST00000556142 CIZ1Q9ULV3 898 aaPredicted RBP11.37□□□□□ -0.59
HNRNPC-223ENST00000556142 TAF6LQ9Y6J9 622 aa11.37□□□□□ -0.59
HNRNPC-223ENST00000556142 ZNF804BA4D1E1 1349 aa11.37□□□□□ -0.59
HNRNPC-223ENST00000556142 MAST3O60307 1309 aa11.37□□□□□ -0.59
HNRNPC-223ENST00000556142 RPAP1Q9BWH6 1393 aaPredicted RBP11.37□□□□□ -0.59
HNRNPC-223ENST00000556142 FOXP2O15409 715 aa11.37□□□□□ -0.59
HNRNPC-223ENST00000556142 TOMM70O94826 608 aa11.37□□□□□ -0.59
HNRNPC-223ENST00000556142 SERPINB2P05120 415 aa11.37□□□□□ -0.59
HNRNPC-223ENST00000556142 ADD2P35612 726 aa11.37□□□□□ -0.59
HNRNPC-223ENST00000556142 BCAMP50895 628 aa11.37□□□□□ -0.59
HNRNPC-223ENST00000556142 DDR1Q08345 913 aa11.37□□□□□ -0.59
HNRNPC-223ENST00000556142 TMX3Q96JJ7 454 aa11.37□□□□□ -0.59
HNRNPC-223ENST00000556142 IRS2Q9Y4H2 1338 aa11.37□□□□□ -0.59
HNRNPC-223ENST00000556142 A0A1B0GUL6 1792 aa11.36□□□□□ -0.59
HNRNPC-223ENST00000556142 TCRBV5S4A2TA0A5A2 114 aa11.36□□□□□ -0.59
HNRNPC-223ENST00000556142 KLRG2A4D1S0 409 aaPredicted RBP11.36□□□□□ -0.59
HNRNPC-223ENST00000556142 POLRMTO00411 1230 aaKnown RBP11.36□□□□□ -0.59
HNRNPC-223ENST00000556142 RASGRF1Q13972 1273 aa11.36□□□□□ -0.59
HNRNPC-223ENST00000556142 COL9A3Q14050 684 aaPredicted RBP11.36□□□□□ -0.59
HNRNPC-223ENST00000556142 TTF1Q15361 905 aaPredicted RBP11.36□□□□□ -0.59
HNRNPC-223ENST00000556142 LRRFIP1Q32MZ4 808 aaKnown RBP11.36□□□□□ -0.59
HNRNPC-223ENST00000556142 CRY2Q49AN0 593 aa11.36□□□□□ -0.59
HNRNPC-223ENST00000556142 VPS53Q5VIR6 699 aa11.36□□□□□ -0.59
HNRNPC-223ENST00000556142 CNBD1Q8NA66 436 aa11.36□□□□□ -0.59
HNRNPC-223ENST00000556142 SPATA5Q8NB90 893 aa11.36□□□□□ -0.59
HNRNPC-223ENST00000556142 APPBP2Q92624 585 aa11.36□□□□□ -0.59
HNRNPC-223ENST00000556142 HSPD1P10809 573 aaKnown RBP11.35□□□□□ -0.59
HNRNPC-223ENST00000556142 CPA1P15085 419 aa11.35□□□□□ -0.59
HNRNPC-223ENST00000556142 UBE3CQ15386 1083 aa11.35□□□□□ -0.59
HNRNPC-223ENST00000556142 COL13A1Q5TAT6 717 aaPredicted RBP11.35□□□□□ -0.59
HNRNPC-223ENST00000556142 FBXO33Q7Z6M2 555 aa11.35□□□□□ -0.59
HNRNPC-223ENST00000556142 JAKMIP1Q96N16 626 aaKnown RBP11.35□□□□□ -0.59
HNRNPC-223ENST00000556142 PUS7LQ9H0K6 701 aaKnown RBP11.35□□□□□ -0.59
HNRNPC-223ENST00000556142 ALDH8A1Q9H2A2 487 aaPredicted RBP11.35□□□□□ -0.59
HNRNPC-223ENST00000556142 TAF1P21675 1872 aa11.35□□□□□ -0.59
HNRNPC-223ENST00000556142 CYP21A2P08686 494 aa11.34□□□□□ -0.59
HNRNPC-223ENST00000556142 ZKSCAN1P17029 563 aaPredicted RBP11.34□□□□□ -0.59
HNRNPC-223ENST00000556142 AK2P54819 239 aa11.34□□□□□ -0.59
HNRNPC-223ENST00000556142 GRAPQ13588 217 aa11.34□□□□□ -0.59
HNRNPC-223ENST00000556142 NBR1Q14596 966 aa11.34□□□□□ -0.59
HNRNPC-223ENST00000556142 RUFY3Q7L099 469 aa11.34□□□□□ -0.59
HNRNPC-223ENST00000556142 GRAPLQ8TC17 118 aaPredicted RBP11.34□□□□□ -0.59
HNRNPC-223ENST00000556142 FAM84BQ96KN1 310 aaPredicted RBP11.34□□□□□ -0.59
HNRNPC-223ENST00000556142 CASTP20810 708 aaKnown RBP11.33□□□□□ -0.6
HNRNPC-223ENST00000556142 KCNJ4P48050 445 aa11.33□□□□□ -0.6
HNRNPC-223ENST00000556142 RAB3GAP1Q15042 981 aa11.33□□□□□ -0.6
HNRNPC-223ENST00000556142 RNF20Q5VTR2 975 aa11.33□□□□□ -0.6
HNRNPC-223ENST00000556142 ZSCAN25Q6NSZ9 544 aa11.33□□□□□ -0.6
HNRNPC-223ENST00000556142 CHRDL2Q6WN34 429 aa11.33□□□□□ -0.6
HNRNPC-223ENST00000556142 ZGPATQ8N5A5 531 aaKnown RBP11.33□□□□□ -0.6
HNRNPC-223ENST00000556142 INTS4Q96HW7 963 aaKnown RBP11.33□□□□□ -0.6
HNRNPC-223ENST00000556142 ANKRD2Q9GZV1 360 aa11.33□□□□□ -0.6
HNRNPC-223ENST00000556142 CWC22Q9HCG8 908 aaKnown RBP11.33□□□□□ -0.6
HNRNPC-223ENST00000556142 FRAT2O75474 233 aaPredicted RBP11.33□□□□□ -0.6
HNRNPC-223ENST00000556142 PDE6AP16499 860 aa11.33□□□□□ -0.6
HNRNPC-223ENST00000556142 PSMA5P28066 241 aa11.33□□□□□ -0.6
HNRNPC-223ENST00000556142 GYG1P46976 350 aa11.33□□□□□ -0.6
HNRNPC-223ENST00000556142 STOX1Q6ZVD7 989 aa11.33□□□□□ -0.6
HNRNPC-223ENST00000556142 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.33□□□□□ -0.6
HNRNPC-223ENST00000556142 PDRG1Q9NUG6 133 aa11.33□□□□□ -0.6
HNRNPC-223ENST00000556142 CYP46A1Q9Y6A2 500 aa11.33□□□□□ -0.6
HNRNPC-223ENST00000556142 ZNF532Q9HCE3 1301 aa11.32□□□□□ -0.6
HNRNPC-223ENST00000556142 A0A0G2JLW4 131 aa11.32□□□□□ -0.6
HNRNPC-223ENST00000556142 RPS6KB1P23443 525 aa11.32□□□□□ -0.6
HNRNPC-223ENST00000556142 KLRK1P26718 216 aa11.32□□□□□ -0.6
HNRNPC-223ENST00000556142 HOXA10P31260 410 aaPredicted RBP11.32□□□□□ -0.6
HNRNPC-223ENST00000556142 ST5P78524 1137 aa11.32□□□□□ -0.6
HNRNPC-223ENST00000556142 KRT32Q14532 448 aa11.32□□□□□ -0.6
HNRNPC-223ENST00000556142 SLC9C2Q5TAH2 1124 aa11.32□□□□□ -0.6
HNRNPC-223ENST00000556142 SLC51AQ86UW1 340 aa11.32□□□□□ -0.6
HNRNPC-223ENST00000556142 NLGN1Q8N2Q7 840 aa11.32□□□□□ -0.6
HNRNPC-223ENST00000556142 KLRG1Q96E93 195 aa11.32□□□□□ -0.6
HNRNPC-223ENST00000556142 COL1A1P02452 1464 aaPredicted RBP11.32□□□□□ -0.6
HNRNPC-223ENST00000556142 WDR90Q96KV7 1748 aa11.31□□□□□ -0.6
HNRNPC-223ENST00000556142 GPAA1O43292 621 aa11.31□□□□□ -0.6
HNRNPC-223ENST00000556142 PRELPP51888 382 aa11.31□□□□□ -0.6
HNRNPC-223ENST00000556142 WASHC4Q2M389 1173 aa11.31□□□□□ -0.6
HNRNPC-223ENST00000556142 TNS4Q8IZW8 715 aa11.31□□□□□ -0.6
HNRNPC-223ENST00000556142 JMYQ8N9B5 988 aa11.31□□□□□ -0.6
HNRNPC-223ENST00000556142 NEK1Q96PY6 1258 aa11.31□□□□□ -0.6
HNRNPC-223ENST00000556142 LIMCH1Q9UPQ0 1083 aa11.31□□□□□ -0.6
HNRNPC-223ENST00000556142 NRXN2Q9P2S2 1712 aa11.31□□□□□ -0.6
HNRNPC-223ENST00000556142 DOCK2Q92608 1830 aa11.31□□□□□ -0.6
HNRNPC-223ENST00000556142 PDS5AQ29RF7 1337 aaKnown RBP11.3□□□□□ -0.6
HNRNPC-223ENST00000556142 IDH1O75874 414 aaKnown RBP11.3□□□□□ -0.6
HNRNPC-223ENST00000556142 LARGE1O95461 756 aa11.3□□□□□ -0.6
HNRNPC-223ENST00000556142 FGAP02671 866 aa11.3□□□□□ -0.6
HNRNPC-223ENST00000556142 HSP90AA1P07900 732 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms