RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 BCL9O00512 1426 aa19.42■□□□□ 0.7
PCNX1-209ENST00000554879 TRIM29Q14134 588 aa19.41■□□□□ 0.7
PCNX1-209ENST00000554879 HELLSQ9NRZ9 838 aa19.41■□□□□ 0.7
PCNX1-209ENST00000554879 SLC4A4Q9Y6R1 1079 aa19.41■□□□□ 0.7
PCNX1-209ENST00000554879 TBC1D9BQ66K14 1250 aa19.41■□□□□ 0.7
PCNX1-209ENST00000554879 INTS5Q6P9B9 1019 aaKnown RBP19.41■□□□□ 0.7
PCNX1-209ENST00000554879 PKP1Q13835 747 aa19.41■□□□□ 0.7
PCNX1-209ENST00000554879 ZNF592Q92610 1267 aa19.41■□□□□ 0.7
PCNX1-209ENST00000554879 MBD4O95243 580 aa19.41■□□□□ 0.7
PCNX1-209ENST00000554879 SPATA5Q8NB90 893 aa19.41■□□□□ 0.7
PCNX1-209ENST00000554879 HMGB1P09429 215 aaKnown RBP19.4■□□□□ 0.7
PCNX1-209ENST00000554879 MSL1Q68DK7 614 aa19.4■□□□□ 0.7
PCNX1-209ENST00000554879 APPBP2Q92624 585 aa19.4■□□□□ 0.7
PCNX1-209ENST00000554879 CCDC39Q9UFE4 941 aa19.4■□□□□ 0.7
PCNX1-209ENST00000554879 DMTNQ08495 405 aa19.4■□□□□ 0.7
PCNX1-209ENST00000554879 VPS53Q5VIR6 699 aa19.4■□□□□ 0.7
PCNX1-209ENST00000554879 TAF3Q5VWG9 929 aa19.4■□□□□ 0.7
PCNX1-209ENST00000554879 ZNF532Q9HCE3 1301 aa19.4■□□□□ 0.7
PCNX1-209ENST00000554879 STX6O43752 255 aa19.39■□□□□ 0.7
PCNX1-209ENST00000554879 RPS6KA4O75676 772 aa19.39■□□□□ 0.7
PCNX1-209ENST00000554879 ATP2B1P20020 1258 aa19.39■□□□□ 0.7
PCNX1-209ENST00000554879 ZBTB9Q96C00 473 aa19.39■□□□□ 0.7
PCNX1-209ENST00000554879 ZFP91Q96JP5 570 aaPredicted RBP19.39■□□□□ 0.7
PCNX1-209ENST00000554879 GPR108Q9NPR9 543 aa19.39■□□□□ 0.7
PCNX1-209ENST00000554879 CCDC69A6NI79 296 aa19.39■□□□□ 0.69
PCNX1-209ENST00000554879 APOBRQ0VD83 1088 aa19.39■□□□□ 0.69
PCNX1-209ENST00000554879 RAB3GAP1Q15042 981 aa19.39■□□□□ 0.69
PCNX1-209ENST00000554879 ARHGEF1Q92888 912 aaKnown RBP19.39■□□□□ 0.69
PCNX1-209ENST00000554879 UBAC1Q9BSL1 405 aa19.39■□□□□ 0.69
PCNX1-209ENST00000554879 ARMT1Q9H993 441 aa19.39■□□□□ 0.69
PCNX1-209ENST00000554879 STRCP1A6NGW2 1772 aa19.39■□□□□ 0.69
PCNX1-209ENST00000554879 GOLGA8BA8MQT2 603 aa19.39■□□□□ 0.69
PCNX1-209ENST00000554879 CAMTA2O94983 1202 aa19.39■□□□□ 0.69
PCNX1-209ENST00000554879 PATL2C9JE40 543 aaKnown RBP19.39■□□□□ 0.69
PCNX1-209ENST00000554879 RANBP6O60518 1105 aaKnown RBP19.39■□□□□ 0.69
PCNX1-209ENST00000554879 NAA16Q6N069 864 aaPredicted RBP19.39■□□□□ 0.69
PCNX1-209ENST00000554879 CHAMP1Q96JM3 812 aa19.39■□□□□ 0.69
PCNX1-209ENST00000554879 GTPBP4Q9BZE4 634 aaKnown RBP19.39■□□□□ 0.69
PCNX1-209ENST00000554879 UBN2Q6ZU65 1347 aa19.38■□□□□ 0.69
PCNX1-209ENST00000554879 FBXO3Q9UK99 471 aa19.38■□□□□ 0.69
PCNX1-209ENST00000554879 DHX16O60231 1041 aaKnown RBP19.38■□□□□ 0.69
PCNX1-209ENST00000554879 NCOA7Q8NI08 942 aa19.38■□□□□ 0.69
PCNX1-209ENST00000554879 USP5P45974 858 aa19.38■□□□□ 0.69
PCNX1-209ENST00000554879 LRP10Q7Z4F1 713 aa19.38■□□□□ 0.69
PCNX1-209ENST00000554879 PIBF1Q8WXW3 757 aa19.38■□□□□ 0.69
PCNX1-209ENST00000554879 MAP4K1Q92918 833 aa19.38■□□□□ 0.69
PCNX1-209ENST00000554879 SCARF1Q14162 830 aa19.37■□□□□ 0.69
PCNX1-209ENST00000554879 MICU3Q86XE3 530 aa19.37■□□□□ 0.69
PCNX1-209ENST00000554879 IFIT3O14879 490 aaKnown RBP19.37■□□□□ 0.69
PCNX1-209ENST00000554879 RIMBP2O15034 1052 aa19.37■□□□□ 0.69
PCNX1-209ENST00000554879 KIF20AO95235 890 aa19.37■□□□□ 0.69
PCNX1-209ENST00000554879 ZNF34Q8IZ26 560 aa19.37■□□□□ 0.69
PCNX1-209ENST00000554879 SALL3Q9BXA9 1300 aa19.37■□□□□ 0.69
PCNX1-209ENST00000554879 RPS6KB1P23443 525 aa19.37■□□□□ 0.69
PCNX1-209ENST00000554879 CASP7P55210 303 aa19.37■□□□□ 0.69
PCNX1-209ENST00000554879 TFIP11Q9UBB9 837 aaKnown RBP19.37■□□□□ 0.69
PCNX1-209ENST00000554879 F8W031 263 aaPredicted RBP19.36■□□□□ 0.69
PCNX1-209ENST00000554879 HSPD1P10809 573 aaKnown RBP19.36■□□□□ 0.69
PCNX1-209ENST00000554879 TNS2Q63HR2 1409 aa19.36■□□□□ 0.69
PCNX1-209ENST00000554879 KLF18A0A0U1RQI7 1052 aa19.36■□□□□ 0.69
PCNX1-209ENST00000554879 TRIM34Q9BYJ4 488 aa19.36■□□□□ 0.69
PCNX1-209ENST00000554879 TRPM3Q9HCF6 1732 aaPredicted RBP19.36■□□□□ 0.69
PCNX1-209ENST00000554879 MCM5P33992 734 aa19.36■□□□□ 0.69
PCNX1-209ENST00000554879 RBM5P52756 815 aaKnown RBP eCLIP19.36■□□□□ 0.69
PCNX1-209ENST00000554879 CDHR2Q9BYE9 1310 aa19.36■□□□□ 0.69
PCNX1-209ENST00000554879 HIBADHP31937 336 aaKnown RBP19.35■□□□□ 0.69
PCNX1-209ENST00000554879 HMGN5P82970 282 aaKnown RBP19.35■□□□□ 0.69
PCNX1-209ENST00000554879 CLEC4GQ6UXB4 293 aa19.35■□□□□ 0.69
PCNX1-209ENST00000554879 OSBP2Q969R2 916 aa19.35■□□□□ 0.69
PCNX1-209ENST00000554879 NARFQ9UHQ1 456 aa19.35■□□□□ 0.69
PCNX1-209ENST00000554879 PRC1O43663 620 aa19.35■□□□□ 0.69
PCNX1-209ENST00000554879 DHX32Q7L7V1 743 aaKnown RBP19.35■□□□□ 0.69
PCNX1-209ENST00000554879 RXRAP19793 462 aa19.35■□□□□ 0.69
PCNX1-209ENST00000554879 MCAMP43121 646 aa19.35■□□□□ 0.69
PCNX1-209ENST00000554879 MFSD6Q6ZSS7 791 aa19.35■□□□□ 0.69
PCNX1-209ENST00000554879 ZNF830Q96NB3 372 aaPredicted RBP19.35■□□□□ 0.69
PCNX1-209ENST00000554879 PDE6AP16499 860 aa19.34■□□□□ 0.69
PCNX1-209ENST00000554879 SLC3A2P08195 630 aaKnown RBP19.34■□□□□ 0.69
PCNX1-209ENST00000554879 KRT85P78386 507 aa19.34■□□□□ 0.69
PCNX1-209ENST00000554879 TMEM67Q5HYA8 995 aa19.34■□□□□ 0.69
PCNX1-209ENST00000554879 GAS2L3Q86XJ1 694 aa19.34■□□□□ 0.69
PCNX1-209ENST00000554879 CELF1Q92879 486 aaKnown RBP19.34■□□□□ 0.69
PCNX1-209ENST00000554879 ANKRD2Q9GZV1 360 aa19.34■□□□□ 0.69
PCNX1-209ENST00000554879 MAST3O60307 1309 aa19.34■□□□□ 0.69
PCNX1-209ENST00000554879 ROBO1Q9Y6N7 1651 aa19.34■□□□□ 0.69
PCNX1-209ENST00000554879 CYP21A2P08686 494 aa19.34■□□□□ 0.69
PCNX1-209ENST00000554879 UFL1O94874 794 aa19.33■□□□□ 0.69
PCNX1-209ENST00000554879 RIPOR2Q9Y4F9 1068 aa19.33■□□□□ 0.69
PCNX1-209ENST00000554879 ALS2Q96Q42 1657 aa19.33■□□□□ 0.69
PCNX1-209ENST00000554879 MAGEB6P1A0A0J9YX57 407 aa19.33■□□□□ 0.69
PCNX1-209ENST00000554879 M0R2C6 588 aa19.33■□□□□ 0.69
PCNX1-209ENST00000554879 PUS7LQ9H0K6 701 aaKnown RBP19.33■□□□□ 0.69
PCNX1-209ENST00000554879 NCOA5Q9HCD5 579 aaKnown RBP19.33■□□□□ 0.69
PCNX1-209ENST00000554879 CSF1RP07333 972 aa19.33■□□□□ 0.68
PCNX1-209ENST00000554879 ZMYM1Q5SVZ6 1142 aa19.33■□□□□ 0.68
PCNX1-209ENST00000554879 ZKSCAN3Q9BRR0 538 aa19.33■□□□□ 0.68
PCNX1-209ENST00000554879 LMO7Q8WWI1 1683 aa19.32■□□□□ 0.68
PCNX1-209ENST00000554879 MBD3O95983 291 aa19.32■□□□□ 0.68
PCNX1-209ENST00000554879 SYT1P21579 422 aa19.32■□□□□ 0.68
PCNX1-209ENST00000554879 ME3Q16798 604 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms