RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 PUS7LQ9H0K6 701 aaKnown RBP17.33■□□□□ 0.36
PPP4R3A-201ENST00000554308 FIBPO43427 364 aa17.32■□□□□ 0.36
PPP4R3A-201ENST00000554308 RPS6KB1P23443 525 aa17.32■□□□□ 0.36
PPP4R3A-201ENST00000554308 NEK1Q96PY6 1258 aa17.32■□□□□ 0.36
PPP4R3A-201ENST00000554308 PRDM10Q9NQV6 1147 aa17.32■□□□□ 0.36
PPP4R3A-201ENST00000554308 NARFQ9UHQ1 456 aa17.32■□□□□ 0.36
PPP4R3A-201ENST00000554308 MYH3P11055 1940 aa17.32■□□□□ 0.36
PPP4R3A-201ENST00000554308 CCDC183Q5T5S1 534 aa17.32■□□□□ 0.36
PPP4R3A-201ENST00000554308 SLC9C2Q5TAH2 1124 aa17.32■□□□□ 0.36
PPP4R3A-201ENST00000554308 TTLL5Q6EMB2 1281 aa17.32■□□□□ 0.36
PPP4R3A-201ENST00000554308 LRRC2Q9BYS8 371 aa17.32■□□□□ 0.36
PPP4R3A-201ENST00000554308 WTIPA6NIX2 430 aaPredicted RBP17.31■□□□□ 0.36
PPP4R3A-201ENST00000554308 NPHP1O15259 732 aa17.31■□□□□ 0.36
PPP4R3A-201ENST00000554308 LRRFIP1Q32MZ4 808 aaKnown RBP17.31■□□□□ 0.36
PPP4R3A-201ENST00000554308 RC3H1Q5TC82 1133 aaKnown RBP17.31■□□□□ 0.36
PPP4R3A-201ENST00000554308 NBPF5PQ86XG9 351 aaPredicted RBP17.31■□□□□ 0.36
PPP4R3A-201ENST00000554308 PRDM4Q9UKN5 801 aa17.31■□□□□ 0.36
PPP4R3A-201ENST00000554308 ONECUT3O60422 494 aaPredicted RBP17.31■□□□□ 0.36
PPP4R3A-201ENST00000554308 ZSCAN22P10073 491 aaPredicted RBP17.31■□□□□ 0.36
PPP4R3A-201ENST00000554308 SLC5A1P13866 664 aa17.31■□□□□ 0.36
PPP4R3A-201ENST00000554308 SYT1P21579 422 aa17.31■□□□□ 0.36
PPP4R3A-201ENST00000554308 FGFR2P21802 821 aa17.31■□□□□ 0.36
PPP4R3A-201ENST00000554308 BCAMP50895 628 aa17.31■□□□□ 0.36
PPP4R3A-201ENST00000554308 CHRNDQ07001 517 aa17.31■□□□□ 0.36
PPP4R3A-201ENST00000554308 STK3Q13188 491 aa17.31■□□□□ 0.36
PPP4R3A-201ENST00000554308 TSGA10IPQ3SY00 556 aa17.31■□□□□ 0.36
PPP4R3A-201ENST00000554308 SMC3Q9UQE7 1217 aa17.31■□□□□ 0.36
PPP4R3A-201ENST00000554308 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.31■□□□□ 0.36
PPP4R3A-201ENST00000554308 PLCB2Q00722 1185 aa17.3■□□□□ 0.36
PPP4R3A-201ENST00000554308 KRT32Q14532 448 aa17.3■□□□□ 0.36
PPP4R3A-201ENST00000554308 NOLC1Q14978 699 aaKnown RBP eCLIP17.3■□□□□ 0.36
PPP4R3A-201ENST00000554308 GIMAP6Q6P9H5 292 aa17.3■□□□□ 0.36
PPP4R3A-201ENST00000554308 PIBF1Q8WXW3 757 aa17.3■□□□□ 0.36
PPP4R3A-201ENST00000554308 PIH1D3Q9NQM4 214 aaKnown RBP17.3■□□□□ 0.36
PPP4R3A-201ENST00000554308 AP5Z1O43299 807 aa17.3■□□□□ 0.36
PPP4R3A-201ENST00000554308 RFC4P35249 363 aa17.3■□□□□ 0.36
PPP4R3A-201ENST00000554308 FAM196AQ6ZSG2 479 aa17.3■□□□□ 0.36
PPP4R3A-201ENST00000554308 TMEM87AQ8NBN3 555 aa17.3■□□□□ 0.36
PPP4R3A-201ENST00000554308 MYRIPQ8NFW9 859 aa17.3■□□□□ 0.36
PPP4R3A-201ENST00000554308 CDC5LQ99459 802 aaKnown RBP17.3■□□□□ 0.36
PPP4R3A-201ENST00000554308 DSCC1Q9BVC3 393 aa17.3■□□□□ 0.36
PPP4R3A-201ENST00000554308 LRRC4BQ9NT99 713 aa17.3■□□□□ 0.36
PPP4R3A-201ENST00000554308 IQSEC3Q9UPP2 1182 aaPredicted RBP17.3■□□□□ 0.36
PPP4R3A-201ENST00000554308 ZFYP08048 801 aaPredicted RBP17.29■□□□□ 0.36
PPP4R3A-201ENST00000554308 FGD1P98174 961 aa17.29■□□□□ 0.36
PPP4R3A-201ENST00000554308 STOX1Q6ZVD7 989 aa17.29■□□□□ 0.36
PPP4R3A-201ENST00000554308 ZNF710Q8N1W2 664 aa17.29■□□□□ 0.36
PPP4R3A-201ENST00000554308 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.29■□□□□ 0.36
PPP4R3A-201ENST00000554308 HAND2P61296 217 aa17.29■□□□□ 0.36
PPP4R3A-201ENST00000554308 TOB2Q14106 344 aaPredicted RBP17.29■□□□□ 0.36
PPP4R3A-201ENST00000554308 ANKRD18AQ8IVF6 992 aa17.29■□□□□ 0.36
PPP4R3A-201ENST00000554308 ZSCAN31Q96LW9 406 aaPredicted RBP17.29■□□□□ 0.36
PPP4R3A-201ENST00000554308 STX6O43752 255 aa17.28■□□□□ 0.36
PPP4R3A-201ENST00000554308 RASGRF1Q13972 1273 aa17.28■□□□□ 0.36
PPP4R3A-201ENST00000554308 TRAPPC3LQ5T215 181 aa17.28■□□□□ 0.36
PPP4R3A-201ENST00000554308 FAM184AQ8NB25 1140 aa17.28■□□□□ 0.36
PPP4R3A-201ENST00000554308 SPATA5Q8NB90 893 aa17.28■□□□□ 0.36
PPP4R3A-201ENST00000554308 APPBP2Q92624 585 aa17.28■□□□□ 0.36
PPP4R3A-201ENST00000554308 SH2B1Q9NRF2 756 aaPredicted RBP17.28■□□□□ 0.36
PPP4R3A-201ENST00000554308 COL5A3P25940 1745 aaPredicted RBP17.28■□□□□ 0.36
PPP4R3A-201ENST00000554308 BTAF1O14981 1849 aa17.28■□□□□ 0.36
PPP4R3A-201ENST00000554308 UVSSAQ2YD98 709 aa17.28■□□□□ 0.36
PPP4R3A-201ENST00000554308 Q6ZUG5 572 aa17.28■□□□□ 0.36
PPP4R3A-201ENST00000554308 CHST3Q7LGC8 479 aa17.28■□□□□ 0.36
PPP4R3A-201ENST00000554308 CELF1Q92879 486 aaKnown RBP17.28■□□□□ 0.36
PPP4R3A-201ENST00000554308 RREB1Q92766 1687 aa17.28■□□□□ 0.36
PPP4R3A-201ENST00000554308 GPAA1O43292 621 aa17.27■□□□□ 0.36
PPP4R3A-201ENST00000554308 UQCRFS1P1P0C7P4 283 aa17.27■□□□□ 0.36
PPP4R3A-201ENST00000554308 GJB2P29033 226 aa17.27■□□□□ 0.36
PPP4R3A-201ENST00000554308 ARID4AP29374 1257 aaPredicted RBP17.27■□□□□ 0.36
PPP4R3A-201ENST00000554308 ST3GAL1Q11201 340 aa17.27■□□□□ 0.36
PPP4R3A-201ENST00000554308 TTF1Q15361 905 aaPredicted RBP17.27■□□□□ 0.36
PPP4R3A-201ENST00000554308 ZNF512BQ96KM6 892 aaPredicted RBP17.27■□□□□ 0.36
PPP4R3A-201ENST00000554308 THSD7AQ9UPZ6 1657 aa17.27■□□□□ 0.36
PPP4R3A-201ENST00000554308 TRIM37O94972 964 aa17.27■□□□□ 0.36
PPP4R3A-201ENST00000554308 ANKRD1Q15327 319 aa17.27■□□□□ 0.36
PPP4R3A-201ENST00000554308 TPTE2Q6XPS3 522 aa17.27■□□□□ 0.36
PPP4R3A-201ENST00000554308 NLRP3Q96P20 1036 aa17.27■□□□□ 0.36
PPP4R3A-201ENST00000554308 BCL11BQ9C0K0 894 aaPredicted RBP17.27■□□□□ 0.36
PPP4R3A-201ENST00000554308 ABCC12Q96J65 1359 aa17.27■□□□□ 0.35
PPP4R3A-201ENST00000554308 F13A1P00488 732 aa17.26■□□□□ 0.35
PPP4R3A-201ENST00000554308 FGAP02671 866 aa17.26■□□□□ 0.35
PPP4R3A-201ENST00000554308 UBE2HP62256 183 aa17.26■□□□□ 0.35
PPP4R3A-201ENST00000554308 DNM1Q05193 864 aaKnown RBP17.26■□□□□ 0.35
PPP4R3A-201ENST00000554308 SF3B3Q15393 1217 aaKnown RBP17.26■□□□□ 0.35
PPP4R3A-201ENST00000554308 TICAM2Q86XR7 235 aa17.26■□□□□ 0.35
PPP4R3A-201ENST00000554308 WWC3Q9ULE0 1092 aa17.26■□□□□ 0.35
PPP4R3A-201ENST00000554308 E7EWF7 191 aa17.26■□□□□ 0.35
PPP4R3A-201ENST00000554308 FOXP2O15409 715 aa17.26■□□□□ 0.35
PPP4R3A-201ENST00000554308 KDM4AO75164 1064 aa17.26■□□□□ 0.35
PPP4R3A-201ENST00000554308 APPP05067 770 aa17.26■□□□□ 0.35
PPP4R3A-201ENST00000554308 ADD2P35612 726 aa17.26■□□□□ 0.35
PPP4R3A-201ENST00000554308 BRF1Q92994 677 aa17.26■□□□□ 0.35
PPP4R3A-201ENST00000554308 ZNF532Q9HCE3 1301 aa17.26■□□□□ 0.35
PPP4R3A-201ENST00000554308 ATRNO75882 1429 aa17.25■□□□□ 0.35
PPP4R3A-201ENST00000554308 NYXQ9GZU5 481 aa17.25■□□□□ 0.35
PPP4R3A-201ENST00000554308 GYG1P46976 350 aa17.25■□□□□ 0.35
PPP4R3A-201ENST00000554308 ZSCAN25Q6NSZ9 544 aa17.25■□□□□ 0.35
PPP4R3A-201ENST00000554308 FUCA2Q9BTY2 467 aa17.25■□□□□ 0.35
PPP4R3A-201ENST00000554308 RTL9Q8NET4 1388 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms