RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 P4HBP07237 508 aaKnown RBP3.58□□□□□ -1.84
CPSF6-207ENST00000551516 MSX1P28360 303 aa3.58□□□□□ -1.84
CPSF6-207ENST00000551516 SMCPP49901 116 aaPredicted RBP3.58□□□□□ -1.84
CPSF6-207ENST00000551516 IDH3AP50213 366 aa3.58□□□□□ -1.84
CPSF6-207ENST00000551516 ARSDP51689 593 aa3.58□□□□□ -1.84
CPSF6-207ENST00000551516 FMR1Q06787 632 aaKnown RBP eCLIP3.58□□□□□ -1.84
CPSF6-207ENST00000551516 DSC3Q14574 896 aa3.58□□□□□ -1.84
CPSF6-207ENST00000551516 WAPLQ7Z5K2 1190 aa3.58□□□□□ -1.84
CPSF6-207ENST00000551516 FBXO33Q7Z6M2 555 aa3.58□□□□□ -1.84
CPSF6-207ENST00000551516 GJD3Q8N144 294 aa3.58□□□□□ -1.84
CPSF6-207ENST00000551516 PGBD3Q8N328 593 aa3.58□□□□□ -1.84
CPSF6-207ENST00000551516 ALKBH8Q96BT7 664 aaKnown RBP3.58□□□□□ -1.84
CPSF6-207ENST00000551516 ZFP42Q96MM3 310 aa3.58□□□□□ -1.84
CPSF6-207ENST00000551516 C8orf37Q96NL8 207 aa3.58□□□□□ -1.84
CPSF6-207ENST00000551516 ZIC5Q96T25 663 aa3.58□□□□□ -1.84
CPSF6-207ENST00000551516 USP21Q9UK80 565 aa3.58□□□□□ -1.84
CPSF6-207ENST00000551516 TRPC5Q9UL62 973 aaPredicted RBP3.58□□□□□ -1.84
CPSF6-207ENST00000551516 RPGRIP1LQ68CZ1 1315 aa3.58□□□□□ -1.84
CPSF6-207ENST00000551516 LRPPRCP42704 1394 aaKnown RBP3.58□□□□□ -1.84
CPSF6-207ENST00000551516 HFM1A2PYH4 1435 aa3.58□□□□□ -1.84
CPSF6-207ENST00000551516 CEP350Q5VT06 3117 aa3.58□□□□□ -1.84
CPSF6-207ENST00000551516 CDC42BPGQ6DT37 1551 aa3.58□□□□□ -1.84
CPSF6-207ENST00000551516 CLTCL1P53675 1640 aa3.58□□□□□ -1.84
CPSF6-207ENST00000551516 GCC2Q8IWJ2 1684 aa3.58□□□□□ -1.84
CPSF6-207ENST00000551516 NALCNQ8IZF0 1738 aa3.58□□□□□ -1.84
CPSF6-207ENST00000551516 A0A1W2PNR3 127 aa3.57□□□□□ -1.84
CPSF6-207ENST00000551516 NRG2O14511 850 aaPredicted RBP3.57□□□□□ -1.84
CPSF6-207ENST00000551516 OPLAHO14841 1288 aa3.57□□□□□ -1.84
CPSF6-207ENST00000551516 GPR182O15218 404 aa3.57□□□□□ -1.84
CPSF6-207ENST00000551516 PIK3C2GO75747 1445 aa3.57□□□□□ -1.84
CPSF6-207ENST00000551516 F11P03951 625 aa3.57□□□□□ -1.84
CPSF6-207ENST00000551516 BMP1P13497 986 aa3.57□□□□□ -1.84
CPSF6-207ENST00000551516 BLMP54132 1417 aaPredicted RBP3.57□□□□□ -1.84
CPSF6-207ENST00000551516 TAGLNQ01995 201 aaKnown RBP3.57□□□□□ -1.84
CPSF6-207ENST00000551516 VPS72Q15906 364 aa3.57□□□□□ -1.84
CPSF6-207ENST00000551516 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.57□□□□□ -1.847e-8■■■□□ 19.2
CPSF6-207ENST00000551516 EFHC2Q5JST6 749 aa3.57□□□□□ -1.84
CPSF6-207ENST00000551516 ALG1LQ6GMV1 187 aa3.57□□□□□ -1.84
CPSF6-207ENST00000551516 LRRC69Q6ZNQ3 347 aa3.57□□□□□ -1.84
CPSF6-207ENST00000551516 TRIM46Q7Z4K8 759 aa3.57□□□□□ -1.84
CPSF6-207ENST00000551516 BTLAQ7Z6A9 289 aa3.57□□□□□ -1.84
CPSF6-207ENST00000551516 UNC5CLQ8IV45 518 aa3.57□□□□□ -1.84
CPSF6-207ENST00000551516 CMTR1Q8N1G2 835 aaKnown RBP3.57□□□□□ -1.84
CPSF6-207ENST00000551516 ZNF280CQ8ND82 737 aa3.57□□□□□ -1.84
CPSF6-207ENST00000551516 C7orf43Q8WVR3 580 aa3.57□□□□□ -1.84
CPSF6-207ENST00000551516 HSH2DQ96JZ2 352 aa3.57□□□□□ -1.84
CPSF6-207ENST00000551516 CEP63Q96MT8 703 aa3.57□□□□□ -1.84
CPSF6-207ENST00000551516 CAMKK2Q96RR4 588 aa3.57□□□□□ -1.84
CPSF6-207ENST00000551516 GAS2L1Q99501 681 aaPredicted RBP3.57□□□□□ -1.84
CPSF6-207ENST00000551516 PRR36Q9H6K5 1346 aa3.57□□□□□ -1.84
CPSF6-207ENST00000551516 C14orf93Q9H972 538 aaKnown RBP3.57□□□□□ -1.84
CPSF6-207ENST00000551516 MRS2Q9HD23 443 aa3.57□□□□□ -1.84
CPSF6-207ENST00000551516 BCS1LQ9Y276 419 aa3.57□□□□□ -1.84
CPSF6-207ENST00000551516 DYRK1BQ9Y463 629 aa3.57□□□□□ -1.84
CPSF6-207ENST00000551516 ADGRB1O14514 1584 aa3.56□□□□□ -1.84
CPSF6-207ENST00000551516 SBNO1A3KN83 1393 aa3.56□□□□□ -1.84
CPSF6-207ENST00000551516 PNMA6FA0A0J9YX94 578 aa3.56□□□□□ -1.84
CPSF6-207ENST00000551516 MAN1A2O60476 641 aa3.56□□□□□ -1.84
CPSF6-207ENST00000551516 PRPF40AO75400 957 aaKnown RBP3.56□□□□□ -1.84
CPSF6-207ENST00000551516 ADAMTS2O95450 1211 aa3.56□□□□□ -1.84
CPSF6-207ENST00000551516 ATP4AP20648 1035 aa3.56□□□□□ -1.84
CPSF6-207ENST00000551516 VAMP1P23763 118 aa3.56□□□□□ -1.84
CPSF6-207ENST00000551516 LAPTM4AQ15012 233 aa3.56□□□□□ -1.84
CPSF6-207ENST00000551516 NLRP8Q86W28 1048 aa3.56□□□□□ -1.84
CPSF6-207ENST00000551516 CSRNP1Q96S65 589 aa3.56□□□□□ -1.84
CPSF6-207ENST00000551516 DNAJC25Q9H1X3 360 aa3.56□□□□□ -1.84
CPSF6-207ENST00000551516 CRISPLD1Q9H336 500 aa3.56□□□□□ -1.84
CPSF6-207ENST00000551516 GGNBP2Q9H3C7 697 aa3.56□□□□□ -1.84
CPSF6-207ENST00000551516 KIAA1522Q9P206 1035 aaPredicted RBP3.56□□□□□ -1.84
CPSF6-207ENST00000551516 DMGDHQ9UI17 866 aaKnown RBP3.56□□□□□ -1.84
CPSF6-207ENST00000551516 RTCBQ9Y3I0 505 aaKnown RBP3.56□□□□□ -1.84
CPSF6-207ENST00000551516 NPHP3Q7Z494 1330 aa3.55□□□□□ -1.84
CPSF6-207ENST00000551516 A6NHS1 94 aa3.55□□□□□ -1.84
CPSF6-207ENST00000551516 H7C1W4 665 aa3.55□□□□□ -1.84
CPSF6-207ENST00000551516 SORBS3O60504 671 aa3.55□□□□□ -1.84
CPSF6-207ENST00000551516 CPNE3O75131 537 aaKnown RBP3.55□□□□□ -1.84
CPSF6-207ENST00000551516 IGHA2P01877 340 aa3.55□□□□□ -1.84
CPSF6-207ENST00000551516 INPP5BP32019 993 aa3.55□□□□□ -1.84
CPSF6-207ENST00000551516 LBRQ14739 615 aaKnown RBP3.55□□□□□ -1.84
CPSF6-207ENST00000551516 ENOX2Q16206 610 aaKnown RBP3.55□□□□□ -1.84
CPSF6-207ENST00000551516 PDE12Q6L8Q7 609 aaKnown RBP3.55□□□□□ -1.84
CPSF6-207ENST00000551516 FIGNL1Q6PIW4 674 aa3.55□□□□□ -1.84
CPSF6-207ENST00000551516 XKR5Q6UX68 686 aa3.55□□□□□ -1.84
CPSF6-207ENST00000551516 RIPOR1Q6ZS17 1223 aa3.55□□□□□ -1.84
CPSF6-207ENST00000551516 ZNF438Q7Z4V0 828 aa3.55□□□□□ -1.84
CPSF6-207ENST00000551516 CRIPAKQ8N1N5 446 aa3.55□□□□□ -1.84
CPSF6-207ENST00000551516 FRMD6Q96NE9 622 aa3.55□□□□□ -1.84
CPSF6-207ENST00000551516 DUSP9Q99956 384 aaKnown RBP3.55□□□□□ -1.84
CPSF6-207ENST00000551516 RUBCNLQ9H714 662 aa3.55□□□□□ -1.84
CPSF6-207ENST00000551516 GPAMQ9HCL2 828 aa3.55□□□□□ -1.84
CPSF6-207ENST00000551516 C11orf16Q9NQ32 467 aa3.55□□□□□ -1.84
CPSF6-207ENST00000551516 PARP2Q9UGN5 583 aa3.55□□□□□ -1.84
CPSF6-207ENST00000551516 DNMT3LQ9UJW3 386 aa3.55□□□□□ -1.84
CPSF6-207ENST00000551516 USP20Q9Y2K6 914 aa3.55□□□□□ -1.84
CPSF6-207ENST00000551516 GOLGB1Q14789 3259 aaKnown RBP3.54□□□□□ -1.84
CPSF6-207ENST00000551516 DHX57Q6P158 1386 aaKnown RBP3.54□□□□□ -1.84
CPSF6-207ENST00000551516 SPATA31A5Q5VU36 1347 aa3.54□□□□□ -1.84
CPSF6-207ENST00000551516 SPATA31A7Q8IWB4 1347 aa3.54□□□□□ -1.84
CPSF6-207ENST00000551516 EIF1AYO14602 144 aaKnown RBP3.54□□□□□ -1.84
CPSF6-207ENST00000551516 XYLBO75191 536 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms