RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 TTC39AQ5SRH9 613 aa21.12■□□□□ 0.97
BRF1-217ENST00000550375 STRIP1Q5VSL9 837 aa21.12■□□□□ 0.97
BRF1-217ENST00000550375 ZBTB47Q9UFB7 747 aaPredicted RBP21.12■□□□□ 0.97
BRF1-217ENST00000550375 CCDC158Q5M9N0 1113 aa21.11■□□□□ 0.97
BRF1-217ENST00000550375 DACT2Q5SW24 774 aa21.11■□□□□ 0.97
BRF1-217ENST00000550375 RSBN1LQ6PCB5 846 aaPredicted RBP21.11■□□□□ 0.97
BRF1-217ENST00000550375 SMC5Q8IY18 1101 aa21.11■□□□□ 0.97
BRF1-217ENST00000550375 RRAGCQ9HB90 399 aa21.1■□□□□ 0.97
BRF1-217ENST00000550375 WDR90Q96KV7 1748 aa21.1■□□□□ 0.97
BRF1-217ENST00000550375 FAM205AQ6ZU69 1335 aa21.1■□□□□ 0.97
BRF1-217ENST00000550375 COL1A1P02452 1464 aaPredicted RBP21.1■□□□□ 0.97
BRF1-217ENST00000550375 RASGRF1Q13972 1273 aa21.1■□□□□ 0.97
BRF1-217ENST00000550375 GPBP1L1Q9HC44 474 aaPredicted RBP21.1■□□□□ 0.97
BRF1-217ENST00000550375 NMRK2Q9NPI5 230 aa21.1■□□□□ 0.97
BRF1-217ENST00000550375 UQCRFS1P1P0C7P4 283 aa21.09■□□□□ 0.97
BRF1-217ENST00000550375 C16orf71Q8IYS4 520 aaPredicted RBP21.09■□□□□ 0.97
BRF1-217ENST00000550375 CERS5Q8N5B7 392 aa21.09■□□□□ 0.97
BRF1-217ENST00000550375 DENND2AQ9ULE3 1009 aa21.09■□□□□ 0.97
BRF1-217ENST00000550375 SHTN1A0MZ66 631 aa21.08■□□□□ 0.96
BRF1-217ENST00000550375 SEMA3EO15041 775 aa21.08■□□□□ 0.96
BRF1-217ENST00000550375 ARID4AP29374 1257 aaPredicted RBP21.08■□□□□ 0.96
BRF1-217ENST00000550375 LMOD1P29536 600 aaPredicted RBP21.08■□□□□ 0.96
BRF1-217ENST00000550375 SCNN1DP51172 638 aa21.08■□□□□ 0.96
BRF1-217ENST00000550375 SCARF1Q14162 830 aa21.08■□□□□ 0.96
BRF1-217ENST00000550375 MFSD14BQ5SR56 506 aa21.08■□□□□ 0.96
BRF1-217ENST00000550375 PI16Q6UXB8 463 aa21.08■□□□□ 0.96
BRF1-217ENST00000550375 L3MBTL3Q96JM7 780 aaPredicted RBP21.08■□□□□ 0.96
BRF1-217ENST00000550375 SNRKQ9NRH2 765 aa21.08■□□□□ 0.96
BRF1-217ENST00000550375 SCN4AP35499 1836 aa21.07■□□□□ 0.96
BRF1-217ENST00000550375 AKAP11Q9UKA4 1901 aa21.07■□□□□ 0.96
BRF1-217ENST00000550375 POTECB2RU33 542 aa21.07■□□□□ 0.96
BRF1-217ENST00000550375 RPS12P25398 132 aaKnown RBP21.07■□□□□ 0.96
BRF1-217ENST00000550375 MCAMP43121 646 aa21.07■□□□□ 0.96
BRF1-217ENST00000550375 KIAA0825Q8IV33 1275 aa21.07■□□□□ 0.96
BRF1-217ENST00000550375 AGBL3Q8NEM8 1001 aa21.07■□□□□ 0.96
BRF1-217ENST00000550375 GPRC5DQ9NZD1 345 aa21.07■□□□□ 0.96
BRF1-217ENST00000550375 HMG20BQ9P0W2 317 aa21.07■□□□□ 0.96
BRF1-217ENST00000550375 CNOT7Q9UIV1 285 aaKnown RBP21.07■□□□□ 0.96
BRF1-217ENST00000550375 F8W031 263 aaPredicted RBP21.06■□□□□ 0.96
BRF1-217ENST00000550375 EPS15P42566 896 aa21.06■□□□□ 0.96
BRF1-217ENST00000550375 MICALL2Q8IY33 904 aa21.06■□□□□ 0.96
BRF1-217ENST00000550375 SPATA5Q8NB90 893 aa21.06■□□□□ 0.96
BRF1-217ENST00000550375 OTUD7AQ8TE49 926 aaPredicted RBP21.06■□□□□ 0.96
BRF1-217ENST00000550375 GMLQ99445 158 aa21.06■□□□□ 0.96
BRF1-217ENST00000550375 LNPKQ9C0E8 428 aa21.06■□□□□ 0.96
BRF1-217ENST00000550375 HACL1Q9UJ83 578 aa21.06■□□□□ 0.96
BRF1-217ENST00000550375 MYO3BQ8WXR4 1341 aa21.06■□□□□ 0.96
BRF1-217ENST00000550375 NUCB1Q02818 461 aa21.05■□□□□ 0.96
BRF1-217ENST00000550375 WDR66Q8TBY9 1149 aa21.05■□□□□ 0.96
BRF1-217ENST00000550375 TBC1D22AQ8WUA7 517 aa21.05■□□□□ 0.96
BRF1-217ENST00000550375 DPF2Q92785 391 aa21.05■□□□□ 0.96
BRF1-217ENST00000550375 CCDC136Q96JN2 1154 aa21.05■□□□□ 0.96
BRF1-217ENST00000550375 ZNF512BQ96KM6 892 aaPredicted RBP21.05■□□□□ 0.96
BRF1-217ENST00000550375 IQCA1LA6NCM1 817 aa21.04■□□□□ 0.96
BRF1-217ENST00000550375 USP17L8P0C7I0 530 aa21.04■□□□□ 0.96
BRF1-217ENST00000550375 VEGFAP15692 232 aaPredicted RBP21.04■□□□□ 0.96
BRF1-217ENST00000550375 FKBP1AP62942 108 aaKnown RBP21.04■□□□□ 0.96
BRF1-217ENST00000550375 GRIK5Q16478 980 aa21.04■□□□□ 0.96
BRF1-217ENST00000550375 CHD1LQ86WJ1 897 aa21.04■□□□□ 0.96
BRF1-217ENST00000550375 H7C1D1 291 aa21.03■□□□□ 0.96
BRF1-217ENST00000550375 TSHZ3Q63HK5 1081 aa21.03■□□□□ 0.96
BRF1-217ENST00000550375 NDUFB9Q9Y6M9 179 aa21.03■□□□□ 0.96
BRF1-217ENST00000550375 MYO5AQ9Y4I1 1855 aaKnown RBP21.02■□□□□ 0.96
BRF1-217ENST00000550375 EPHX2P34913 555 aa21.02■□□□□ 0.96
BRF1-217ENST00000550375 ZAP70P43403 619 aa21.02■□□□□ 0.96
BRF1-217ENST00000550375 RBM26Q5T8P6 1007 aaKnown RBP21.02■□□□□ 0.96
BRF1-217ENST00000550375 ERICH6BQ5W0A0 696 aa21.02■□□□□ 0.96
BRF1-217ENST00000550375 TBC1D9Q6ZT07 1266 aa21.02■□□□□ 0.96
BRF1-217ENST00000550375 ABCF2Q9UG63 623 aa21.02■□□□□ 0.96
BRF1-217ENST00000550375 CEP350Q5VT06 3117 aa21.02■□□□□ 0.96
BRF1-217ENST00000550375 PDS5AQ29RF7 1337 aaKnown RBP21.01■□□□□ 0.95
BRF1-217ENST00000550375 ZBTB22O15209 634 aa21.01■□□□□ 0.95
BRF1-217ENST00000550375 SAMD7Q7Z3H4 446 aa21.01■□□□□ 0.95
BRF1-217ENST00000550375 OGFOD1Q8N543 542 aa21.01■□□□□ 0.95
BRF1-217ENST00000550375 GPATCH3Q96I76 525 aa21.01■□□□□ 0.95
BRF1-217ENST00000550375 BOLA2Q9H3K6 86 aa21.01■□□□□ 0.95
BRF1-217ENST00000550375 TAF1DQ9H5J8 278 aaPredicted RBP21.01■□□□□ 0.95
BRF1-217ENST00000550375 ECHDC1Q9NTX5 307 aa21.01■□□□□ 0.95
BRF1-217ENST00000550375 TTF2Q9UNY4 1162 aaKnown RBP21.01■□□□□ 0.95
BRF1-217ENST00000550375 ATP5JP18859 108 aa21■□□□□ 0.95
BRF1-217ENST00000550375 TBC1D10BQ4KMP7 808 aaPredicted RBP21■□□□□ 0.95
BRF1-217ENST00000550375 EAPPQ56P03 285 aaPredicted RBP21■□□□□ 0.95
BRF1-217ENST00000550375 DNAJC2Q99543 621 aaKnown RBP21■□□□□ 0.95
BRF1-217ENST00000550375 HDAC9Q9UKV0 1011 aa21■□□□□ 0.95
BRF1-217ENST00000550375 ADAMTSL1Q8N6G6 1762 aa21■□□□□ 0.95
BRF1-217ENST00000550375 SALL1Q9NSC2 1324 aa21■□□□□ 0.95
BRF1-217ENST00000550375 CYP2E1P05181 493 aaPredicted RBP20.99■□□□□ 0.95
BRF1-217ENST00000550375 MX1P20591 662 aa20.99■□□□□ 0.95
BRF1-217ENST00000550375 PRDX5P30044 214 aa20.99■□□□□ 0.95
BRF1-217ENST00000550375 ZNF280AP59817 542 aaPredicted RBP20.99■□□□□ 0.95
BRF1-217ENST00000550375 CENPQQ7L2Z9 268 aaPredicted RBP20.99■□□□□ 0.95
BRF1-217ENST00000550375 TRPM4Q8TD43 1214 aa20.99■□□□□ 0.95
BRF1-217ENST00000550375 ADARB2Q9NS39 739 aaKnown RBP20.99■□□□□ 0.95
BRF1-217ENST00000550375 PPP4R2Q9NY27 417 aa20.99■□□□□ 0.95
BRF1-217ENST00000550375 EGFRP00533 1210 aa20.98■□□□□ 0.95
BRF1-217ENST00000550375 LDHBP07195 334 aaKnown RBP20.98■□□□□ 0.95
BRF1-217ENST00000550375 ZGPATQ8N5A5 531 aaKnown RBP20.98■□□□□ 0.95
BRF1-217ENST00000550375 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.98■□□□□ 0.95
BRF1-217ENST00000550375 MYOZ2Q9NPC6 264 aa20.98■□□□□ 0.95
BRF1-217ENST00000550375 SALL3Q9BXA9 1300 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms