RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 CFHR5Q9BXR6 569 aa17.24■□□□□ 0.35
TROAP-211ENST00000549891 DEFB129Q9H1M3 183 aa17.24■□□□□ 0.35
TROAP-211ENST00000549891 MRS2Q9HD23 443 aa17.24■□□□□ 0.35
TROAP-211ENST00000549891 HPS5Q9UPZ3 1129 aa17.24■□□□□ 0.35
TROAP-211ENST00000549891 LAMB1P07942 1786 aa17.23■□□□□ 0.35
TROAP-211ENST00000549891 PPP1R12BO60237 982 aaPredicted RBP17.23■□□□□ 0.35
TROAP-211ENST00000549891 IL1R1P14778 569 aa17.23■□□□□ 0.35
TROAP-211ENST00000549891 INHBEP58166 350 aa17.23■□□□□ 0.35
TROAP-211ENST00000549891 EXOSC9Q06265 439 aaKnown RBP17.23■□□□□ 0.35
TROAP-211ENST00000549891 TAF7LQ5H9L4 462 aa17.23■□□□□ 0.35
TROAP-211ENST00000549891 SPRYD7Q5W111 196 aa17.23■□□□□ 0.35
TROAP-211ENST00000549891 IRS2Q9Y4H2 1338 aa17.22■□□□□ 0.35
TROAP-211ENST00000549891 UNCXA6NJT0 531 aa17.22■□□□□ 0.35
TROAP-211ENST00000549891 MAP3K11Q16584 847 aa17.22■□□□□ 0.35
TROAP-211ENST00000549891 SUPT20HL1Q3ZLR7 823 aa17.22■□□□□ 0.35
TROAP-211ENST00000549891 BEND3Q5T5X7 828 aa17.22■□□□□ 0.35
TROAP-211ENST00000549891 CERS5Q8N5B7 392 aa17.22■□□□□ 0.35
TROAP-211ENST00000549891 HELBQ8NG08 1087 aaPredicted RBP17.22■□□□□ 0.35
TROAP-211ENST00000549891 SLC10A4Q96EP9 437 aa17.22■□□□□ 0.35
TROAP-211ENST00000549891 MANSC4A6NHS7 340 aaPredicted RBP17.21■□□□□ 0.35
TROAP-211ENST00000549891 F6X3S4 739 aa17.21■□□□□ 0.35
TROAP-211ENST00000549891 SNAP23O00161 211 aa17.21■□□□□ 0.35
TROAP-211ENST00000549891 GRM8O00222 908 aa17.21■□□□□ 0.35
TROAP-211ENST00000549891 FKTNO75072 461 aa17.21■□□□□ 0.35
TROAP-211ENST00000549891 ZBTB48P10074 688 aaPredicted RBP17.21■□□□□ 0.35
TROAP-211ENST00000549891 LMBR1LQ6UX01 489 aa17.21■□□□□ 0.35
TROAP-211ENST00000549891 LDHAL6AQ6ZMR3 332 aa17.21■□□□□ 0.35
TROAP-211ENST00000549891 SALL2Q9Y467 1007 aaPredicted RBP17.21■□□□□ 0.35
TROAP-211ENST00000549891 SPDYE2BA6NHP3 402 aa17.2■□□□□ 0.34
TROAP-211ENST00000549891 F8W031 263 aaPredicted RBP17.2■□□□□ 0.34
TROAP-211ENST00000549891 ANP32CO43423 234 aa17.2■□□□□ 0.34
TROAP-211ENST00000549891 SPDYE6P0CI01 402 aa17.2■□□□□ 0.34
TROAP-211ENST00000549891 CFAP100Q494V2 611 aa17.2■□□□□ 0.34
TROAP-211ENST00000549891 FBXO46Q6PJ61 603 aaPredicted RBP17.2■□□□□ 0.34
TROAP-211ENST00000549891 CNNM1Q9NRU3 951 aa17.2■□□□□ 0.34
TROAP-211ENST00000549891 C9orf78Q9NZ63 289 aaPredicted RBP17.2■□□□□ 0.34
TROAP-211ENST00000549891 PLIN1O60240 522 aa17.19■□□□□ 0.34
TROAP-211ENST00000549891 RBM5P52756 815 aaKnown RBP eCLIP17.19■□□□□ 0.34
TROAP-211ENST00000549891 ARAP2Q8WZ64 1704 aa17.18■□□□□ 0.34
TROAP-211ENST00000549891 ALDH1L1O75891 902 aa17.18■□□□□ 0.34
TROAP-211ENST00000549891 IREB2P48200 963 aaKnown RBP17.18■□□□□ 0.34
TROAP-211ENST00000549891 TNFAIP1Q13829 316 aa17.18■□□□□ 0.34
TROAP-211ENST00000549891 PRMT6Q96LA8 375 aaPredicted RBP17.18■□□□□ 0.34
TROAP-211ENST00000549891 VEZTQ9HBM0 779 aa17.18■□□□□ 0.34
TROAP-211ENST00000549891 CLRN2A0PK11 232 aa17.17■□□□□ 0.34
TROAP-211ENST00000549891 OTUD7BQ6GQQ9 843 aa17.17■□□□□ 0.34
TROAP-211ENST00000549891 IFNL1Q8IU54 200 aa17.17■□□□□ 0.34
TROAP-211ENST00000549891 WNK4Q96J92 1243 aa17.17■□□□□ 0.34
TROAP-211ENST00000549891 ZNF594Q96JF6 807 aaPredicted RBP17.17■□□□□ 0.34
TROAP-211ENST00000549891 FZD1Q9UP38 647 aa17.17■□□□□ 0.34
TROAP-211ENST00000549891 FAM205AQ6ZU69 1335 aa17.17■□□□□ 0.34
TROAP-211ENST00000549891 SSC5DA1L4H1 1573 aa17.16■□□□□ 0.34
TROAP-211ENST00000549891 UBE4AQ14139 1066 aa17.16■□□□□ 0.34
TROAP-211ENST00000549891 EPHA10Q5JZY3 1008 aa17.16■□□□□ 0.34
TROAP-211ENST00000549891 SRCIN1Q9C0H9 1055 aa17.16■□□□□ 0.34
TROAP-211ENST00000549891 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.16■□□□□ 0.34
TROAP-211ENST00000549891 PCDHAC2Q9Y5I4 1007 aa17.16■□□□□ 0.34
TROAP-211ENST00000549891 MFSD14BQ5SR56 506 aa17.15■□□□□ 0.34
TROAP-211ENST00000549891 NBPF12Q5TAG4 269 aaPredicted RBP17.15■□□□□ 0.34
TROAP-211ENST00000549891 PRPF38BQ5VTL8 546 aaKnown RBP17.15■□□□□ 0.34
TROAP-211ENST00000549891 SLC4A10Q6U841 1118 aa17.15■□□□□ 0.34
TROAP-211ENST00000549891 ANKRD13AQ8IZ07 590 aa17.15■□□□□ 0.34
TROAP-211ENST00000549891 TDRD7Q8NHU6 1098 aaKnown RBP17.15■□□□□ 0.34
TROAP-211ENST00000549891 CLMNQ96JQ2 1002 aa17.15■□□□□ 0.34
TROAP-211ENST00000549891 SERPINA10Q9UK55 444 aa17.15■□□□□ 0.34
TROAP-211ENST00000549891 JAG2Q9Y219 1238 aa17.15■□□□□ 0.34
TROAP-211ENST00000549891 HIBADHP31937 336 aaKnown RBP17.14■□□□□ 0.33
TROAP-211ENST00000549891 RASA3Q14644 834 aa17.14■□□□□ 0.33
TROAP-211ENST00000549891 R3HDMLQ9H3Y0 253 aa17.14■□□□□ 0.33
TROAP-211ENST00000549891 TTF2Q9UNY4 1162 aaKnown RBP17.14■□□□□ 0.33
TROAP-211ENST00000549891 OTOFQ9HC10 1997 aa17.14■□□□□ 0.33
TROAP-211ENST00000549891 USP2O75604 605 aaPredicted RBP17.13■□□□□ 0.33
TROAP-211ENST00000549891 SPINK5Q9NQ38 1064 aaPredicted RBP17.13■□□□□ 0.33
TROAP-211ENST00000549891 PCDH10Q9P2E7 1040 aa17.13■□□□□ 0.33
TROAP-211ENST00000549891 MROH5Q6ZUA9 1318 aa17.13■□□□□ 0.33
TROAP-211ENST00000549891 IGF2BP3O00425 579 aaKnown RBP eCLIP17.12■□□□□ 0.33
TROAP-211ENST00000549891 GYG1P46976 350 aa17.12■□□□□ 0.33
TROAP-211ENST00000549891 TNNI2P48788 182 aa17.12■□□□□ 0.33
TROAP-211ENST00000549891 SPDYE2Q495Y8 402 aa17.12■□□□□ 0.33
TROAP-211ENST00000549891 VPS37DQ86XT2 251 aa17.12■□□□□ 0.33
TROAP-211ENST00000549891 ERO1AQ96HE7 468 aa17.12■□□□□ 0.33
TROAP-211ENST00000549891 FAM84BQ96KN1 310 aaPredicted RBP17.12■□□□□ 0.33
TROAP-211ENST00000549891 ZNF70Q9UC06 446 aaPredicted RBP17.12■□□□□ 0.33
TROAP-211ENST00000549891 TRIM17Q9Y577 477 aa17.12■□□□□ 0.33
TROAP-211ENST00000549891 INTS3Q68E01 1043 aaKnown RBP17.11■□□□□ 0.33
TROAP-211ENST00000549891 CAVIN4Q5BKX8 364 aa17.1■□□□□ 0.33
TROAP-211ENST00000549891 OTOP1Q7RTM1 612 aa17.1■□□□□ 0.33
TROAP-211ENST00000549891 DZIP1LQ8IYY4 767 aaKnown RBP17.1■□□□□ 0.33
TROAP-211ENST00000549891 TBC1D22AQ8WUA7 517 aa17.1■□□□□ 0.33
TROAP-211ENST00000549891 SUCLG2Q96I99 432 aa17.1■□□□□ 0.33
TROAP-211ENST00000549891 TDRD3Q9H7E2 651 aaKnown RBP17.1■□□□□ 0.33
TROAP-211ENST00000549891 RIPOR2Q9Y4F9 1068 aa17.1■□□□□ 0.33
TROAP-211ENST00000549891 UTYO14607 1347 aa17.1■□□□□ 0.33
TROAP-211ENST00000549891 AOX1Q06278 1338 aa17.1■□□□□ 0.33
TROAP-211ENST00000549891 TESPA1A2RU30 521 aaPredicted RBP17.09■□□□□ 0.33
TROAP-211ENST00000549891 FRAT2O75474 233 aaPredicted RBP17.09■□□□□ 0.33
TROAP-211ENST00000549891 NBPF7P0C2Y1 421 aaPredicted RBP17.09■□□□□ 0.33
TROAP-211ENST00000549891 CRKP46108 304 aa17.09■□□□□ 0.33
TROAP-211ENST00000549891 FAM9BQ8IZU0 186 aa17.09■□□□□ 0.33
TROAP-211ENST00000549891 OPTNQ96CV9 577 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms