RNA–Protein interactions for RNA: ENST00000548858.1

AC025260.1-201, humanhuman

BASIC

Gene AC025260.1, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025260.1-201ENST00000548858 TNNI3KQ59H18 835 aa6.94□□□□□ -1.3
AC025260.1-201ENST00000548858 GMCL1Q96IK5 515 aa6.94□□□□□ -1.3
AC025260.1-201ENST00000548858 SRPK1Q96SB4 655 aaKnown RBP6.94□□□□□ -1.3
AC025260.1-201ENST00000548858 METTL12A8MUP2 240 aa6.93□□□□□ -1.3
AC025260.1-201ENST00000548858 PDE2AO00408 941 aaPredicted RBP6.93□□□□□ -1.3
AC025260.1-201ENST00000548858 BNIP3LO60238 219 aa6.93□□□□□ -1.3
AC025260.1-201ENST00000548858 CRKP46108 304 aa6.93□□□□□ -1.3
AC025260.1-201ENST00000548858 NEUROD1Q13562 356 aa6.93□□□□□ -1.3
AC025260.1-201ENST00000548858 RASA3Q14644 834 aa6.93□□□□□ -1.3
AC025260.1-201ENST00000548858 SPRED3Q2MJR0 410 aa6.93□□□□□ -1.3
AC025260.1-201ENST00000548858 FAM182BQ5T319 152 aa6.93□□□□□ -1.3
AC025260.1-201ENST00000548858 RIPOR1Q6ZS17 1223 aa6.93□□□□□ -1.3
AC025260.1-201ENST00000548858 CRIPAKQ8N1N5 446 aa6.93□□□□□ -1.3
AC025260.1-201ENST00000548858 TRPM4Q8TD43 1214 aa6.93□□□□□ -1.3
AC025260.1-201ENST00000548858 HNRNPLLQ8WVV9 542 aaKnown RBP6.93□□□□□ -1.3
AC025260.1-201ENST00000548858 BHMTQ93088 406 aa6.93□□□□□ -1.3
AC025260.1-201ENST00000548858 SHDQ96IW2 340 aa6.93□□□□□ -1.3
AC025260.1-201ENST00000548858 NSUN5Q96P11 429 aaKnown RBP6.93□□□□□ -1.3
AC025260.1-201ENST00000548858 SLC30A3Q99726 388 aa6.93□□□□□ -1.3
AC025260.1-201ENST00000548858 HCN2Q9UL51 889 aa6.93□□□□□ -1.3
AC025260.1-201ENST00000548858 PDZRN3Q9UPQ7 1066 aa6.93□□□□□ -1.3
AC025260.1-201ENST00000548858 R3HCC1Q9Y3T6 440 aaKnown RBP6.93□□□□□ -1.3
AC025260.1-201ENST00000548858 SLC35F4A4IF30 521 aa6.92□□□□□ -1.3
AC025260.1-201ENST00000548858 MAN1A2O60476 641 aa6.92□□□□□ -1.3
AC025260.1-201ENST00000548858 TRPA1O75762 1119 aa6.92□□□□□ -1.3
AC025260.1-201ENST00000548858 FAAP100Q0VG06 881 aa6.92□□□□□ -1.3
AC025260.1-201ENST00000548858 MPP2Q14168 576 aa6.92□□□□□ -1.3
AC025260.1-201ENST00000548858 PCSK7Q16549 785 aa6.92□□□□□ -1.3
AC025260.1-201ENST00000548858 TRIM22Q8IYM9 498 aa6.92□□□□□ -1.3
AC025260.1-201ENST00000548858 GATAD2BQ8WXI9 593 aa6.92□□□□□ -1.3
AC025260.1-201ENST00000548858 ANAPC16Q96DE5 110 aa6.92□□□□□ -1.3
AC025260.1-201ENST00000548858 HHIPQ96QV1 700 aa6.92□□□□□ -1.3
AC025260.1-201ENST00000548858 PBX4Q9BYU1 374 aa6.92□□□□□ -1.3
AC025260.1-201ENST00000548858 TMEM39AQ9NV64 488 aa6.92□□□□□ -1.3
AC025260.1-201ENST00000548858 SNTG2Q9NY99 539 aa6.92□□□□□ -1.3
AC025260.1-201ENST00000548858 GPN3Q9UHW5 284 aaPredicted RBP6.92□□□□□ -1.3
AC025260.1-201ENST00000548858 ATXN7L1Q9ULK2 861 aaPredicted RBP6.92□□□□□ -1.3
AC025260.1-201ENST00000548858 SAMM50Q9Y512 469 aa6.92□□□□□ -1.3
AC025260.1-201ENST00000548858 LOC102724428A0A0B4J2F2 783 aa6.91□□□□□ -1.3
AC025260.1-201ENST00000548858 PAGE1O75459 146 aa6.91□□□□□ -1.3
AC025260.1-201ENST00000548858 LMNB1P20700 586 aa6.91□□□□□ -1.3
AC025260.1-201ENST00000548858 SIK1P57059 783 aa6.91□□□□□ -1.3
AC025260.1-201ENST00000548858 PPP2R3AQ06190 1150 aa6.91□□□□□ -1.3
AC025260.1-201ENST00000548858 DIEXFQ68CQ4 756 aaKnown RBP6.91□□□□□ -1.3
AC025260.1-201ENST00000548858 OR6P1Q8NGX9 317 aa6.91□□□□□ -1.3
AC025260.1-201ENST00000548858 DEPDC7Q96QD5 511 aa6.91□□□□□ -1.3
AC025260.1-201ENST00000548858 CYP8B1Q9UNU6 501 aa6.91□□□□□ -1.3
AC025260.1-201ENST00000548858 MSRB2Q9Y3D2 182 aa6.91□□□□□ -1.3
AC025260.1-201ENST00000548858 FAM221AA4D161 298 aa6.9□□□□□ -1.3
AC025260.1-201ENST00000548858 F13A1P00488 732 aa6.9□□□□□ -1.3
AC025260.1-201ENST00000548858 CD33P20138 364 aa6.9□□□□□ -1.3
AC025260.1-201ENST00000548858 GIPRP48546 466 aa6.9□□□□□ -1.3
AC025260.1-201ENST00000548858 PTSQ03393 145 aa6.9□□□□□ -1.3
AC025260.1-201ENST00000548858 DBN1Q16643 649 aa6.9□□□□□ -1.3
AC025260.1-201ENST00000548858 CWF19L2Q2TBE0 894 aaKnown RBP6.9□□□□□ -1.3
AC025260.1-201ENST00000548858 SEZ6Q53EL9 994 aa6.9□□□□□ -1.3
AC025260.1-201ENST00000548858 ASAP3Q8TDY4 903 aa6.9□□□□□ -1.3
AC025260.1-201ENST00000548858 ABHD17AQ96GS6 310 aa6.9□□□□□ -1.3
AC025260.1-201ENST00000548858 RNPC3Q96LT9 517 aaKnown RBP6.9□□□□□ -1.3
AC025260.1-201ENST00000548858 BRINP2Q9C0B6 783 aa6.9□□□□□ -1.3
AC025260.1-201ENST00000548858 CCDC113Q9H0I3 377 aa6.9□□□□□ -1.3
AC025260.1-201ENST00000548858 RBSNQ9H1K0 784 aa6.9□□□□□ -1.3
AC025260.1-201ENST00000548858 MIR1-1HGQ9H1L0 117 aa6.9□□□□□ -1.3
AC025260.1-201ENST00000548858 RASSF4Q9H2L5 321 aa6.9□□□□□ -1.3
AC025260.1-201ENST00000548858 CLEC4MQ9H2X3 399 aaPredicted RBP6.9□□□□□ -1.3
AC025260.1-201ENST00000548858 ZBTB42B2RXF5 422 aa6.89□□□□□ -1.31
AC025260.1-201ENST00000548858 SMAD7O15105 426 aaKnown RBP6.89□□□□□ -1.31
AC025260.1-201ENST00000548858 AXIN1O15169 862 aa6.89□□□□□ -1.31
AC025260.1-201ENST00000548858 DGAT1O75907 488 aa6.89□□□□□ -1.31
AC025260.1-201ENST00000548858 RGS20O76081 388 aa6.89□□□□□ -1.31
AC025260.1-201ENST00000548858 BMP6P22004 513 aa6.89□□□□□ -1.31
AC025260.1-201ENST00000548858 ZNF165P49910 485 aa6.89□□□□□ -1.31
AC025260.1-201ENST00000548858 EIF6P56537 245 aaKnown RBP6.89□□□□□ -1.31
AC025260.1-201ENST00000548858 BNC2Q6ZN30 1099 aaPredicted RBP6.89□□□□□ -1.31
AC025260.1-201ENST00000548858 RAB44Q7Z6P3 723 aaPredicted RBP6.89□□□□□ -1.31
AC025260.1-201ENST00000548858 REXO1Q8N1G1 1221 aaKnown RBP6.89□□□□□ -1.31
AC025260.1-201ENST00000548858 BSNDQ8WZ55 320 aa6.89□□□□□ -1.31
AC025260.1-201ENST00000548858 KCNB2Q92953 911 aa6.89□□□□□ -1.31
AC025260.1-201ENST00000548858 PPT2Q9UMR5 302 aa6.89□□□□□ -1.31
AC025260.1-201ENST00000548858 PHF24Q9UPV7 400 aa6.89□□□□□ -1.31
AC025260.1-201ENST00000548858 CILPO75339 1184 aa6.88□□□□□ -1.31
AC025260.1-201ENST00000548858 SMNDC1O75940 238 aaKnown RBP eCLIP6.88□□□□□ -1.31
AC025260.1-201ENST00000548858 B3GALT4O96024 378 aa6.88□□□□□ -1.31
AC025260.1-201ENST00000548858 GHRHP01286 108 aa6.88□□□□□ -1.31
AC025260.1-201ENST00000548858 IMPDH2P12268 514 aa6.88□□□□□ -1.31
AC025260.1-201ENST00000548858 NME2P22392 152 aa6.88□□□□□ -1.31
AC025260.1-201ENST00000548858 ATP11AP98196 1134 aa6.88□□□□□ -1.31
AC025260.1-201ENST00000548858 LRRC14Q15048 493 aa6.88□□□□□ -1.31
AC025260.1-201ENST00000548858 PTPROQ16827 1216 aa6.88□□□□□ -1.31
AC025260.1-201ENST00000548858 PLEKHG4Q58EX7 1191 aa6.88□□□□□ -1.31
AC025260.1-201ENST00000548858 RNF187Q5TA31 235 aaPredicted RBP6.88□□□□□ -1.31
AC025260.1-201ENST00000548858 SCARA3Q6AZY7 606 aa6.88□□□□□ -1.31
AC025260.1-201ENST00000548858 CCDC81Q6ZN84 652 aa6.88□□□□□ -1.31
AC025260.1-201ENST00000548858 REC114Q7Z4M0 266 aa6.88□□□□□ -1.31
AC025260.1-201ENST00000548858 MUC3BQ9H195 1237 aa6.88□□□□□ -1.31
AC025260.1-201ENST00000548858 TMX1Q9H3N1 280 aa6.88□□□□□ -1.31
AC025260.1-201ENST00000548858 ZNRF3Q9ULT6 936 aa6.88□□□□□ -1.31
AC025260.1-201ENST00000548858 PCDHB5Q9Y5E4 795 aa6.88□□□□□ -1.31
AC025260.1-201ENST00000548858 FAM221BA6H8Z2 402 aa6.87□□□□□ -1.31
AC025260.1-201ENST00000548858 J3QW42 95 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms