RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 ZNF589Q86UQ0 364 aaPredicted RBP13.5□□□□□ -0.25
DDB1-224ENST00000545894 ZBTB3Q9H5J0 574 aa13.5□□□□□ -0.25
DDB1-224ENST00000545894 UBR3Q6ZT12 1888 aa13.49□□□□□ -0.25
DDB1-224ENST00000545894 MAP3K15Q6ZN16 1313 aa13.49□□□□□ -0.25
DDB1-224ENST00000545894 NR1I2O75469 434 aa13.49□□□□□ -0.25
DDB1-224ENST00000545894 TAF5LO75529 589 aa13.49□□□□□ -0.25
DDB1-224ENST00000545894 CAVIN2O95810 425 aa13.49□□□□□ -0.25
DDB1-224ENST00000545894 ZSCAN20P17040 1043 aaPredicted RBP13.49□□□□□ -0.25
DDB1-224ENST00000545894 RFC4P35249 363 aa13.49□□□□□ -0.25
DDB1-224ENST00000545894 ZNF165P49910 485 aa13.49□□□□□ -0.25
DDB1-224ENST00000545894 HLFQ16534 295 aa13.49□□□□□ -0.25
DDB1-224ENST00000545894 ATP2B3Q16720 1220 aa13.49□□□□□ -0.25
DDB1-224ENST00000545894 USPL1Q5W0Q7 1092 aa13.49□□□□□ -0.25
DDB1-224ENST00000545894 ZSCAN25Q6NSZ9 544 aa13.49□□□□□ -0.25
DDB1-224ENST00000545894 KIF6Q6ZMV9 814 aa13.49□□□□□ -0.25
DDB1-224ENST00000545894 PGBD1Q96JS3 809 aa13.49□□□□□ -0.25
DDB1-224ENST00000545894 PDGFDQ9GZP0 370 aaPredicted RBP13.49□□□□□ -0.25
DDB1-224ENST00000545894 SIL1Q9H173 461 aa13.49□□□□□ -0.25
DDB1-224ENST00000545894 NARFQ9UHQ1 456 aa13.49□□□□□ -0.25
DDB1-224ENST00000545894 LRMPQ12912 555 aa13.48□□□□□ -0.25
DDB1-224ENST00000545894 RESTQ13127 1097 aa13.48□□□□□ -0.25
DDB1-224ENST00000545894 FLAD1Q8NFF5 587 aa13.48□□□□□ -0.25
DDB1-224ENST00000545894 PLBD2Q8NHP8 589 aa13.48□□□□□ -0.25
DDB1-224ENST00000545894 GTF3C6Q969F1 213 aa13.48□□□□□ -0.25
DDB1-224ENST00000545894 RIC3Q7Z5B4 369 aa13.48□□□□□ -0.25
DDB1-224ENST00000545894 NRBP1Q9UHY1 535 aa13.48□□□□□ -0.25
DDB1-224ENST00000545894 ERVV-1B6SEH8 477 aa13.47□□□□□ -0.25
DDB1-224ENST00000545894 JAK2O60674 1132 aa13.47□□□□□ -0.25
DDB1-224ENST00000545894 ZPR1O75312 459 aa13.47□□□□□ -0.25
DDB1-224ENST00000545894 R3HDM1Q15032 1099 aaKnown RBP13.47□□□□□ -0.25
DDB1-224ENST00000545894 BRF1Q92994 677 aa13.47□□□□□ -0.25
DDB1-224ENST00000545894 NEK1Q96PY6 1258 aa13.47□□□□□ -0.25
DDB1-224ENST00000545894 DNAJC25Q9H1X3 360 aa13.47□□□□□ -0.25
DDB1-224ENST00000545894 ZSCAN16Q9H4T2 348 aaPredicted RBP13.47□□□□□ -0.25
DDB1-224ENST00000545894 SMTNL1A8MU46 457 aa13.47□□□□□ -0.25
DDB1-224ENST00000545894 CDC25BP30305 580 aa13.47□□□□□ -0.25
DDB1-224ENST00000545894 C16orf45Q96MC5 204 aaPredicted RBP13.47□□□□□ -0.25
DDB1-224ENST00000545894 CLIP2Q9UDT6 1046 aa13.47□□□□□ -0.25
DDB1-224ENST00000545894 CFAP45Q9UL16 551 aa13.47□□□□□ -0.25
DDB1-224ENST00000545894 H3BQV1 296 aa13.46□□□□□ -0.25
DDB1-224ENST00000545894 SYCP1Q15431 976 aa13.46□□□□□ -0.25
DDB1-224ENST00000545894 IFFO2Q5TF58 517 aa13.46□□□□□ -0.25
DDB1-224ENST00000545894 IGKV5-2P06315 115 aa13.46□□□□□ -0.26
DDB1-224ENST00000545894 GYS1P13807 737 aa13.46□□□□□ -0.26
DDB1-224ENST00000545894 GIGYF2Q6Y7W6 1299 aaKnown RBP13.46□□□□□ -0.26
DDB1-224ENST00000545894 KLHDC4Q8TBB5 520 aa13.46□□□□□ -0.26
DDB1-224ENST00000545894 GTPBP4Q9BZE4 634 aaKnown RBP13.46□□□□□ -0.26
DDB1-224ENST00000545894 PAXBP1Q9Y5B6 917 aa13.46□□□□□ -0.26
DDB1-224ENST00000545894 PSDA5PKW4 1024 aaPredicted RBP13.45□□□□□ -0.26
DDB1-224ENST00000545894 TNNT1P13805 278 aa13.45□□□□□ -0.26
DDB1-224ENST00000545894 HSP90B1P14625 803 aaKnown RBP13.45□□□□□ -0.26
DDB1-224ENST00000545894 ATP5JP18859 108 aa13.45□□□□□ -0.26
DDB1-224ENST00000545894 Q6ZUG5 572 aa13.45□□□□□ -0.26
DDB1-224ENST00000545894 CACTINQ8WUQ7 758 aaKnown RBP13.45□□□□□ -0.26
DDB1-224ENST00000545894 EDC3Q96F86 508 aaKnown RBP13.45□□□□□ -0.26
DDB1-224ENST00000545894 METTL22Q9BUU2 404 aaPredicted RBP13.45□□□□□ -0.26
DDB1-224ENST00000545894 U3KPZ7 1027 aaPredicted RBP13.45□□□□□ -0.26
DDB1-224ENST00000545894 C4AP0C0L4 1744 aa13.45□□□□□ -0.26
DDB1-224ENST00000545894 NCBP1Q09161 790 aaKnown RBP13.44□□□□□ -0.26
DDB1-224ENST00000545894 NEXNQ0ZGT2 675 aa13.44□□□□□ -0.26
DDB1-224ENST00000545894 SARM1Q6SZW1 724 aa13.44□□□□□ -0.26
DDB1-224ENST00000545894 MYD88Q99836 296 aa13.44□□□□□ -0.26
DDB1-224ENST00000545894 RFX7Q2KHR2 1363 aa13.44□□□□□ -0.26
DDB1-224ENST00000545894 NEURL1BA8MQ27 555 aa13.44□□□□□ -0.26
DDB1-224ENST00000545894 GOLGA6L19H0YKK7 550 aa13.44□□□□□ -0.26
DDB1-224ENST00000545894 CTAGE5O15320 804 aa13.44□□□□□ -0.26
DDB1-224ENST00000545894 U2AF2P26368 475 aaKnown RBP eCLIP13.44□□□□□ -0.26
DDB1-224ENST00000545894 TCIRG1Q13488 830 aa13.44□□□□□ -0.26
DDB1-224ENST00000545894 CLEC4GQ6UXB4 293 aa13.44□□□□□ -0.26
DDB1-224ENST00000545894 DDX11Q96FC9 970 aa13.44□□□□□ -0.26
DDB1-224ENST00000545894 FEZ1Q99689 392 aa13.44□□□□□ -0.26
DDB1-224ENST00000545894 SPDYE4A6NLX3 237 aa13.43□□□□□ -0.26
DDB1-224ENST00000545894 ATP5J2-PTCD1G3V325 749 aa13.43□□□□□ -0.26
DDB1-224ENST00000545894 GCKRQ14397 625 aa13.43□□□□□ -0.26
DDB1-224ENST00000545894 IQCB1Q15051 598 aa13.43□□□□□ -0.26
DDB1-224ENST00000545894 TPD52L1Q16890 204 aaPredicted RBP13.43□□□□□ -0.26
DDB1-224ENST00000545894 QSER1Q2KHR3 1735 aa13.43□□□□□ -0.26
DDB1-224ENST00000545894 CCDC144BQ3MJ40 725 aa13.43□□□□□ -0.26
DDB1-224ENST00000545894 TBC1D9BQ66K14 1250 aa13.43□□□□□ -0.26
DDB1-224ENST00000545894 CCDC144CPQ8IYA2 1237 aa13.43□□□□□ -0.26
DDB1-224ENST00000545894 LLPHQ9BRT6 129 aaKnown RBP13.43□□□□□ -0.26
DDB1-224ENST00000545894 COPRSQ9NQ92 184 aa13.43□□□□□ -0.26
DDB1-224ENST00000545894 DBNLQ9UJU6 430 aaKnown RBP13.43□□□□□ -0.26
DDB1-224ENST00000545894 STX1AQ16623 288 aa13.43□□□□□ -0.26
DDB1-224ENST00000545894 EPHA10Q5JZY3 1008 aa13.43□□□□□ -0.26
DDB1-224ENST00000545894 MSL1Q68DK7 614 aa13.43□□□□□ -0.26
DDB1-224ENST00000545894 ZNF34Q8IZ26 560 aa13.43□□□□□ -0.26
DDB1-224ENST00000545894 CCDC112Q8NEF3 446 aa13.43□□□□□ -0.26
DDB1-224ENST00000545894 SMARCC2Q8TAQ2 1214 aa13.43□□□□□ -0.26
DDB1-224ENST00000545894 MRFAP1L1Q96HT8 127 aa13.43□□□□□ -0.26
DDB1-224ENST00000545894 ZNF652Q9Y2D9 606 aa13.43□□□□□ -0.26
DDB1-224ENST00000545894 RGL2O15211 777 aa13.42□□□□□ -0.26
DDB1-224ENST00000545894 NEMFO60524 1076 aa13.42□□□□□ -0.26
DDB1-224ENST00000545894 GPTP24298 496 aa13.42□□□□□ -0.26
DDB1-224ENST00000545894 SCRN1Q12765 414 aa13.42□□□□□ -0.26
DDB1-224ENST00000545894 TNNI3KQ59H18 835 aa13.42□□□□□ -0.26
DDB1-224ENST00000545894 NAA16Q6N069 864 aaPredicted RBP13.42□□□□□ -0.26
DDB1-224ENST00000545894 BICDL1Q6ZP65 573 aa13.42□□□□□ -0.26
DDB1-224ENST00000545894 ISCA1Q9BUE6 129 aa13.42□□□□□ -0.26
DDB1-224ENST00000545894 ZHX1Q9UKY1 873 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms