RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 SOX1O00570 391 aaPredicted RBP9.25□□□□□ -0.93
SNHG1-224ENST00000545688 C19orf57Q0VDD7 668 aa9.25□□□□□ -0.93
SNHG1-224ENST00000545688 ORC1Q13415 861 aa9.25□□□□□ -0.93
SNHG1-224ENST00000545688 IKBKEQ14164 716 aa9.25□□□□□ -0.93
SNHG1-224ENST00000545688 CEP41Q9BYV8 373 aa9.25□□□□□ -0.93
SNHG1-224ENST00000545688 A0A1W2PP55 124 aa9.24□□□□□ -0.93
SNHG1-224ENST00000545688 ARL4DP49703 201 aa9.24□□□□□ -0.93
SNHG1-224ENST00000545688 PDE3BQ13370 1112 aa9.24□□□□□ -0.93
SNHG1-224ENST00000545688 SCO2A0A1W2PP80 73 aa9.23□□□□□ -0.93
SNHG1-224ENST00000545688 SOWAHDA6NJG2 315 aa9.23□□□□□ -0.93
SNHG1-224ENST00000545688 ARMC10Q8N2F6 343 aa9.23□□□□□ -0.93
SNHG1-224ENST00000545688 GPR182O15218 404 aa9.22□□□□□ -0.93
SNHG1-224ENST00000545688 IGHA2P01877 340 aa9.22□□□□□ -0.93
SNHG1-224ENST00000545688 NEFLP07196 543 aa9.22□□□□□ -0.93
SNHG1-224ENST00000545688 ESRRAP11474 423 aaPredicted RBP9.22□□□□□ -0.93
SNHG1-224ENST00000545688 CCNJLQ8IV13 435 aa9.22□□□□□ -0.93
SNHG1-224ENST00000545688 CITED4Q96RK1 184 aa9.22□□□□□ -0.93
SNHG1-224ENST00000545688 TCF12Q99081 682 aa9.22□□□□□ -0.93
SNHG1-224ENST00000545688 CPNE3O75131 537 aaKnown RBP9.21□□□□□ -0.94
SNHG1-224ENST00000545688 FSTP19883 344 aa9.21□□□□□ -0.94
SNHG1-224ENST00000545688 FAM46AQ96IP4 442 aaKnown RBP9.21□□□□□ -0.94
SNHG1-224ENST00000545688 RUSC1Q9BVN2 902 aa9.21□□□□□ -0.94
SNHG1-224ENST00000545688 NIF3L1Q9GZT8 377 aa9.21□□□□□ -0.94
SNHG1-224ENST00000545688 RNF208Q9H0X6 261 aa9.21□□□□□ -0.94
SNHG1-224ENST00000545688 LIN7BQ9HAP6 207 aa9.21□□□□□ -0.94
SNHG1-224ENST00000545688 GNEQ9Y223 722 aaKnown RBP9.21□□□□□ -0.94
SNHG1-224ENST00000545688 RAXQ9Y2V3 346 aa9.21□□□□□ -0.94
SNHG1-224ENST00000545688 A0A096LPE4 126 aa9.2□□□□□ -0.94
SNHG1-224ENST00000545688 A0A1W2PPZ6 126 aa9.2□□□□□ -0.94
SNHG1-224ENST00000545688 BRD1O95696 1058 aa9.2□□□□□ -0.94
SNHG1-224ENST00000545688 GRIA4P48058 902 aa9.2□□□□□ -0.94
SNHG1-224ENST00000545688 SPRED3Q2MJR0 410 aa9.2□□□□□ -0.94
SNHG1-224ENST00000545688 UVSSAQ2YD98 709 aa9.2□□□□□ -0.94
SNHG1-224ENST00000545688 TMC1Q8TDI8 760 aa9.2□□□□□ -0.94
SNHG1-224ENST00000545688 UTP4Q969X6 686 aaKnown RBP9.2□□□□□ -0.94
SNHG1-224ENST00000545688 USP26Q9BXU7 913 aa9.2□□□□□ -0.94
SNHG1-224ENST00000545688 NPHS2Q9NP85 383 aa9.2□□□□□ -0.94
SNHG1-224ENST00000545688 DHX15O43143 795 aaKnown RBP9.19□□□□□ -0.94
SNHG1-224ENST00000545688 PREPP48147 710 aa9.19□□□□□ -0.94
SNHG1-224ENST00000545688 SOX17Q9H6I2 414 aaPredicted RBP9.19□□□□□ -0.94
SNHG1-224ENST00000545688 KIAA0319Q5VV43 1072 aa9.18□□□□□ -0.94
SNHG1-224ENST00000545688 ANKRD34AQ69YU3 496 aa9.18□□□□□ -0.94
SNHG1-224ENST00000545688 RBCK1Q9BYM8 510 aa9.18□□□□□ -0.94
SNHG1-224ENST00000545688 LOC100289279A0A1B0GTE1 492 aa9.17□□□□□ -0.94
SNHG1-224ENST00000545688 EIF1AYO14602 144 aaKnown RBP9.17□□□□□ -0.94
SNHG1-224ENST00000545688 GSTM4Q03013 218 aa9.17□□□□□ -0.94
SNHG1-224ENST00000545688 PCDH1Q08174 1060 aa9.17□□□□□ -0.94
SNHG1-224ENST00000545688 ARTNQ5T4W7 220 aa9.17□□□□□ -0.94
SNHG1-224ENST00000545688 FDX2Q6P4F2 183 aa9.17□□□□□ -0.94
SNHG1-224ENST00000545688 MYRFLQ96LU7 910 aa9.17□□□□□ -0.94
SNHG1-224ENST00000545688 DMRTB1Q96MA1 342 aa9.17□□□□□ -0.94
SNHG1-224ENST00000545688 EHD4Q9H223 541 aa9.17□□□□□ -0.94
SNHG1-224ENST00000545688 CLEC4MQ9H2X3 399 aaPredicted RBP9.17□□□□□ -0.94
SNHG1-224ENST00000545688 STOML1Q9UBI4 398 aa9.17□□□□□ -0.94
SNHG1-224ENST00000545688 BIN2Q9UBW5 565 aaPredicted RBP9.17□□□□□ -0.94
SNHG1-224ENST00000545688 MEGF11A6BM72 1044 aa9.16□□□□□ -0.94
SNHG1-224ENST00000545688 SART1O43290 800 aaKnown RBP9.16□□□□□ -0.94
SNHG1-224ENST00000545688 DLGAP3O95886 979 aa9.16□□□□□ -0.94
SNHG1-224ENST00000545688 ZNF423Q2M1K9 1284 aa9.16□□□□□ -0.94
SNHG1-224ENST00000545688 CCDC74AQ96AQ1 378 aa9.16□□□□□ -0.94
SNHG1-224ENST00000545688 DNAJC25Q9H1X3 360 aa9.16□□□□□ -0.94
SNHG1-224ENST00000545688 ZFP64Q9NPA5 681 aa9.16□□□□□ -0.94
SNHG1-224ENST00000545688 LRP8Q14114 963 aa9.15□□□□□ -0.94
SNHG1-224ENST00000545688 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.15□□□□□ -0.94
SNHG1-224ENST00000545688 ALKBH8Q96BT7 664 aaKnown RBP9.15□□□□□ -0.94
SNHG1-224ENST00000545688 TMPRSS13Q9BYE2 586 aa9.15□□□□□ -0.94
SNHG1-224ENST00000545688 NRSN2Q9GZP1 204 aa9.15□□□□□ -0.94
SNHG1-224ENST00000545688 RNF112Q9ULX5 631 aa9.15□□□□□ -0.94
SNHG1-224ENST00000545688 TMC7Q7Z402 723 aa9.14□□□□□ -0.95
SNHG1-224ENST00000545688 TRIM42Q8IWZ5 723 aa9.14□□□□□ -0.95
SNHG1-224ENST00000545688 FAM20CQ8IXL6 584 aa9.14□□□□□ -0.95
SNHG1-224ENST00000545688 CSRNP1Q96S65 589 aa9.14□□□□□ -0.95
SNHG1-224ENST00000545688 C7orf69Q9H7B7 122 aa9.14□□□□□ -0.95
SNHG1-224ENST00000545688 HMX2A2RU54 273 aa9.13□□□□□ -0.95
SNHG1-224ENST00000545688 IGLV1-40P01703 118 aa9.13□□□□□ -0.95
SNHG1-224ENST00000545688 BMP3P12645 472 aa9.13□□□□□ -0.95
SNHG1-224ENST00000545688 NUTM2GQ5VZR2 741 aa9.13□□□□□ -0.95
SNHG1-224ENST00000545688 SLC51AQ86UW1 340 aa9.13□□□□□ -0.95
SNHG1-224ENST00000545688 ZNF576Q9H609 170 aa9.13□□□□□ -0.95
SNHG1-224ENST00000545688 DCTN4Q9UJW0 460 aa9.13□□□□□ -0.95
SNHG1-224ENST00000545688 GSC2O15499 205 aa9.12□□□□□ -0.95
SNHG1-224ENST00000545688 HYAL3O43820 417 aaPredicted RBP9.12□□□□□ -0.95
SNHG1-224ENST00000545688 GAS2O43903 313 aaKnown RBP9.12□□□□□ -0.95
SNHG1-224ENST00000545688 GADD45BO75293 160 aaPredicted RBP9.12□□□□□ -0.95
SNHG1-224ENST00000545688 SMG8Q8ND04 991 aaKnown RBP9.12□□□□□ -0.95
SNHG1-224ENST00000545688 ABCB6Q9NP58 842 aa9.12□□□□□ -0.95
SNHG1-224ENST00000545688 CTSBP07858 339 aa9.11□□□□□ -0.95
SNHG1-224ENST00000545688 ITPKAP23677 461 aa9.11□□□□□ -0.95
SNHG1-224ENST00000545688 BEND4Q6ZU67 534 aa9.11□□□□□ -0.95
SNHG1-224ENST00000545688 C12orf50Q8NA57 414 aaPredicted RBP9.11□□□□□ -0.95
SNHG1-224ENST00000545688 EPS8L3Q8TE67 593 aaKnown RBP9.11□□□□□ -0.95
SNHG1-224ENST00000545688 KCNF1Q9H3M0 494 aa9.11□□□□□ -0.95
SNHG1-224ENST00000545688 SUGCTQ9HAC7 445 aa9.11□□□□□ -0.95
SNHG1-224ENST00000545688 CYP4F12Q9HCS2 524 aa9.11□□□□□ -0.95
SNHG1-224ENST00000545688 TIAF1O95411 115 aa9.1□□□□□ -0.95
SNHG1-224ENST00000545688 B3GALT4O96024 378 aa9.1□□□□□ -0.95
SNHG1-224ENST00000545688 MAPK1P28482 360 aa9.1□□□□□ -0.95
SNHG1-224ENST00000545688 NFIAQ12857 509 aa9.1□□□□□ -0.95
SNHG1-224ENST00000545688 EXOSC6Q5RKV6 272 aaKnown RBP9.1□□□□□ -0.95
SNHG1-224ENST00000545688 PRPF40BQ6NWY9 871 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms