RNA–Protein interactions for RNA: ENST00000545042.1

DDX55-213, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-213ENST00000545042 CELF2O95319 508 aaKnown RBP16.46■□□□□ 0.23
DDX55-213ENST00000545042 RLBP1P12271 317 aa16.46■□□□□ 0.23
DDX55-213ENST00000545042 FGFR2P21802 821 aa16.46■□□□□ 0.23
DDX55-213ENST00000545042 FMR1Q06787 632 aaKnown RBP eCLIP16.46■□□□□ 0.23
DDX55-213ENST00000545042 ATP2B3Q16720 1220 aa16.46■□□□□ 0.23
DDX55-213ENST00000545042 ANGEL2Q5VTE6 544 aaKnown RBP16.46■□□□□ 0.23
DDX55-213ENST00000545042 ZNF408Q9H9D4 720 aa16.46■□□□□ 0.23
DDX55-213ENST00000545042 MKRN1Q9UHC7 482 aaKnown RBP16.46■□□□□ 0.23
DDX55-213ENST00000545042 JAG2Q9Y219 1238 aa16.46■□□□□ 0.23
DDX55-213ENST00000545042 PITPNM2Q9BZ72 1349 aa16.45■□□□□ 0.22
DDX55-213ENST00000545042 ZNF646O15015 1829 aaPredicted RBP16.45■□□□□ 0.22
DDX55-213ENST00000545042 MFSD14BQ5SR56 506 aa16.45■□□□□ 0.22
DDX55-213ENST00000545042 CERS5Q8N5B7 392 aa16.45■□□□□ 0.22
DDX55-213ENST00000545042 PANK1Q8TE04 598 aa16.45■□□□□ 0.22
DDX55-213ENST00000545042 TRPM7Q96QT4 1865 aa16.45■□□□□ 0.22
DDX55-213ENST00000545042 CNTNAP1P78357 1384 aa16.44■□□□□ 0.22
DDX55-213ENST00000545042 F8W031 263 aaPredicted RBP16.44■□□□□ 0.22
DDX55-213ENST00000545042 ZBTB7BO15156 539 aaPredicted RBP16.44■□□□□ 0.22
DDX55-213ENST00000545042 BCAMP50895 628 aa16.44■□□□□ 0.22
DDX55-213ENST00000545042 CHAF1AQ13111 956 aaPredicted RBP16.44■□□□□ 0.22
DDX55-213ENST00000545042 G3BP1Q13283 466 aaKnown RBP eCLIP16.44■□□□□ 0.22
DDX55-213ENST00000545042 DLGAP5Q15398 846 aa16.44■□□□□ 0.22
DDX55-213ENST00000545042 DEFB115Q30KQ5 88 aa16.44■□□□□ 0.22
DDX55-213ENST00000545042 CST9Q5W186 159 aa16.44■□□□□ 0.22
DDX55-213ENST00000545042 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.44■□□□□ 0.22
DDX55-213ENST00000545042 TBC1D22AQ8WUA7 517 aa16.44■□□□□ 0.22
DDX55-213ENST00000545042 GNL3LQ9NVN8 582 aaKnown RBP16.44■□□□□ 0.22
DDX55-213ENST00000545042 IQSEC3Q9UPP2 1182 aaPredicted RBP16.44■□□□□ 0.22
DDX55-213ENST00000545042 AKAP2Q9Y2D5 859 aa16.44■□□□□ 0.22
DDX55-213ENST00000545042 ASTN2O75129 1339 aaPredicted RBP16.44■□□□□ 0.22
DDX55-213ENST00000545042 PNMA6EA0A0J9YXQ4 647 aa16.43■□□□□ 0.22
DDX55-213ENST00000545042 RASSF10A6NK89 507 aa16.43■□□□□ 0.22
DDX55-213ENST00000545042 ADM5C9JUS6 153 aa16.43■□□□□ 0.22
DDX55-213ENST00000545042 WNT10BO00744 389 aa16.43■□□□□ 0.22
DDX55-213ENST00000545042 NBPF9Q3BBW0 867 aa16.43■□□□□ 0.22
DDX55-213ENST00000545042 JMYQ8N9B5 988 aa16.43■□□□□ 0.22
DDX55-213ENST00000545042 MYO1BO43795 1136 aa16.42■□□□□ 0.22
DDX55-213ENST00000545042 RBM5P52756 815 aaKnown RBP eCLIP16.42■□□□□ 0.224e-6■■□□□ 12.4
DDX55-213ENST00000545042 ATP8B2P98198 1209 aa16.42■□□□□ 0.22
DDX55-213ENST00000545042 PAXIP1Q6ZW49 1069 aaPredicted RBP16.42■□□□□ 0.22
DDX55-213ENST00000545042 CHMP4BQ9H444 224 aaKnown RBP16.42■□□□□ 0.22
DDX55-213ENST00000545042 C1orf115Q9H7X2 142 aa16.42■□□□□ 0.22
DDX55-213ENST00000545042 TLL2Q9Y6L7 1015 aa16.42■□□□□ 0.22
DDX55-213ENST00000545042 POLR2AP24928 1970 aaKnown RBP16.41■□□□□ 0.22
DDX55-213ENST00000545042 TFCP2Q12800 502 aa16.41■□□□□ 0.22
DDX55-213ENST00000545042 OS9Q13438 667 aaPredicted RBP16.41■□□□□ 0.22
DDX55-213ENST00000545042 MVPQ14764 893 aaKnown RBP16.41■□□□□ 0.22
DDX55-213ENST00000545042 CFAP100Q494V2 611 aa16.41■□□□□ 0.22
DDX55-213ENST00000545042 APOBEC3FQ8IUX4 373 aaKnown RBP16.41■□□□□ 0.22
DDX55-213ENST00000545042 C2orf69Q8N8R5 385 aa16.41■□□□□ 0.22
DDX55-213ENST00000545042 MTMR14Q8NCE2 650 aa16.41■□□□□ 0.22
DDX55-213ENST00000545042 DDX19BQ9UMR2 479 aa16.41■□□□□ 0.22
DDX55-213ENST00000545042 TTF2Q9UNY4 1162 aaKnown RBP16.41■□□□□ 0.22
DDX55-213ENST00000545042 ECE1P42892 770 aa16.4■□□□□ 0.22
DDX55-213ENST00000545042 VEGFBP49765 207 aa16.4■□□□□ 0.22
DDX55-213ENST00000545042 POLA2Q14181 598 aa16.4■□□□□ 0.22
DDX55-213ENST00000545042 WDR66Q8TBY9 1149 aa16.4■□□□□ 0.22
DDX55-213ENST00000545042 SSH3Q8TE77 659 aa16.4■□□□□ 0.22
DDX55-213ENST00000545042 CDCA5Q96FF9 252 aa16.4■□□□□ 0.22
DDX55-213ENST00000545042 ZBED3Q96IU2 234 aaPredicted RBP16.4■□□□□ 0.22
DDX55-213ENST00000545042 YTHDC1Q96MU7 727 aaKnown RBP16.4■□□□□ 0.22
DDX55-213ENST00000545042 SEMA3EO15041 775 aa16.39■□□□□ 0.21
DDX55-213ENST00000545042 DLK2Q6UY11 383 aa16.39■□□□□ 0.21
DDX55-213ENST00000545042 SAPCD2Q86UD0 394 aa16.39■□□□□ 0.21
DDX55-213ENST00000545042 GBA2Q9HCG7 927 aaPredicted RBP16.39■□□□□ 0.21
DDX55-213ENST00000545042 SERPINA10Q9UK55 444 aa16.39■□□□□ 0.21
DDX55-213ENST00000545042 COG6Q9Y2V7 657 aa16.39■□□□□ 0.21
DDX55-213ENST00000545042 SUGT1Q9Y2Z0 365 aa16.39■□□□□ 0.21
DDX55-213ENST00000545042 A0A1B0GUL7 405 aa16.38■□□□□ 0.21
DDX55-213ENST00000545042 SPDYE2BA6NHP3 402 aa16.38■□□□□ 0.21
DDX55-213ENST00000545042 SURF6O75683 361 aaKnown RBP16.38■□□□□ 0.21
DDX55-213ENST00000545042 SPDYE6P0CI01 402 aa16.38■□□□□ 0.21
DDX55-213ENST00000545042 NF2P35240 595 aa16.38■□□□□ 0.21
DDX55-213ENST00000545042 TIMM10P62072 90 aa16.38■□□□□ 0.21
DDX55-213ENST00000545042 PDE3AQ14432 1141 aa16.38■□□□□ 0.21
DDX55-213ENST00000545042 GORABQ5T7V8 394 aa16.38■□□□□ 0.21
DDX55-213ENST00000545042 HHIPL1Q96JK4 782 aa16.38■□□□□ 0.21
DDX55-213ENST00000545042 NEUROD6Q96NK8 337 aa16.38■□□□□ 0.21
DDX55-213ENST00000545042 DENND2AQ9ULE3 1009 aa16.38■□□□□ 0.21
DDX55-213ENST00000545042 MAST3O60307 1309 aa16.38■□□□□ 0.21
DDX55-213ENST00000545042 ARAP2Q8WZ64 1704 aa16.37■□□□□ 0.21
DDX55-213ENST00000545042 ADORA1P30542 326 aa16.37■□□□□ 0.21
DDX55-213ENST00000545042 PHKA1P46020 1223 aa16.37■□□□□ 0.21
DDX55-213ENST00000545042 HUNKP57058 714 aa16.37■□□□□ 0.21
DDX55-213ENST00000545042 HDLBPQ00341 1268 aaKnown RBP16.37■□□□□ 0.21
DDX55-213ENST00000545042 GRM1Q13255 1194 aa16.37■□□□□ 0.21
DDX55-213ENST00000545042 CCDC102BQ68D86 513 aa16.37■□□□□ 0.21
DDX55-213ENST00000545042 XAGE2Q96GT9 111 aa16.37■□□□□ 0.21
DDX55-213ENST00000545042 CAPNS2Q96L46 248 aa16.37■□□□□ 0.21
DDX55-213ENST00000545042 WDR33Q9C0J8 1336 aaKnown RBP16.37■□□□□ 0.21
DDX55-213ENST00000545042 CRKP46108 304 aa16.36■□□□□ 0.21
DDX55-213ENST00000545042 FKBP1BP68106 108 aa16.36■□□□□ 0.21
DDX55-213ENST00000545042 CEP85Q6P2H3 762 aa16.36■□□□□ 0.21
DDX55-213ENST00000545042 TEKT1Q969V4 418 aa16.36■□□□□ 0.21
DDX55-213ENST00000545042 PRMT6Q96LA8 375 aaPredicted RBP16.36■□□□□ 0.21
DDX55-213ENST00000545042 VEZTQ9HBM0 779 aa16.36■□□□□ 0.21
DDX55-213ENST00000545042 SCAF8Q9UPN6 1271 aaKnown RBP16.36■□□□□ 0.21
DDX55-213ENST00000545042 MYH13Q9UKX3 1938 aa16.35■□□□□ 0.21
DDX55-213ENST00000545042 CLRN2A0PK11 232 aa16.35■□□□□ 0.21
DDX55-213ENST00000545042 CYP4F22Q6NT55 531 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms