RNA–Protein interactions for RNA: ENST00000542815.7

ZEB1-208, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,217 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-208ENST00000542815 RFX7Q2KHR2 1363 aa6.36□□□□□ -1.39
ZEB1-208ENST00000542815 TRAF5O00463 557 aa6.36□□□□□ -1.39
ZEB1-208ENST00000542815 IPO8O15397 1037 aaKnown RBP6.36□□□□□ -1.39
ZEB1-208ENST00000542815 FKBP1CQ5VVH2 108 aa6.36□□□□□ -1.39
ZEB1-208ENST00000542815 TTLL11Q8NHH1 800 aa6.36□□□□□ -1.39
ZEB1-208ENST00000542815 MIS18AQ9NYP9 233 aa6.36□□□□□ -1.39
ZEB1-208ENST00000542815 SUGT1Q9Y2Z0 365 aa6.36□□□□□ -1.39
ZEB1-208ENST00000542815 NPHP1O15259 732 aa6.35□□□□□ -1.39
ZEB1-208ENST00000542815 IGKV5-2P06315 115 aa6.35□□□□□ -1.39
ZEB1-208ENST00000542815 GPTP24298 496 aa6.35□□□□□ -1.39
ZEB1-208ENST00000542815 ARMC5Q96C12 935 aa6.35□□□□□ -1.39
ZEB1-208ENST00000542815 DCPSQ96C86 337 aaKnown RBP6.35□□□□□ -1.39
ZEB1-208ENST00000542815 MYOZ2Q9NPC6 264 aa6.35□□□□□ -1.39
ZEB1-208ENST00000542815 SMC4Q9NTJ3 1288 aa6.35□□□□□ -1.39
ZEB1-208ENST00000542815 ABT1Q9ULW3 272 aaKnown RBP6.35□□□□□ -1.39
ZEB1-208ENST00000542815 PCDHB15Q9Y5E8 787 aa6.35□□□□□ -1.39
ZEB1-208ENST00000542815 ALPK3Q96L96 1907 aa6.35□□□□□ -1.39
ZEB1-208ENST00000542815 NEURL1BA8MQ27 555 aa6.35□□□□□ -1.39
ZEB1-208ENST00000542815 FRAT2O75474 233 aaPredicted RBP6.35□□□□□ -1.39
ZEB1-208ENST00000542815 SREBF2Q12772 1141 aa6.35□□□□□ -1.39
ZEB1-208ENST00000542815 MVPQ14764 893 aaKnown RBP6.35□□□□□ -1.39
ZEB1-208ENST00000542815 PRPF38BQ5VTL8 546 aaKnown RBP6.35□□□□□ -1.39
ZEB1-208ENST00000542815 INTS3Q68E01 1043 aaKnown RBP6.35□□□□□ -1.39
ZEB1-208ENST00000542815 CSRNP1Q96S65 589 aa6.35□□□□□ -1.39
ZEB1-208ENST00000542815 AOC2O75106 756 aa6.35□□□□□ -1.39
ZEB1-208ENST00000542815 GNRH1P01148 92 aa6.35□□□□□ -1.39
ZEB1-208ENST00000542815 GCC1Q96CN9 775 aa6.35□□□□□ -1.39
ZEB1-208ENST00000542815 THUMPD2Q9BTF0 503 aaKnown RBP6.35□□□□□ -1.39
ZEB1-208ENST00000542815 BRPF3Q9ULD4 1205 aa6.35□□□□□ -1.39
ZEB1-208ENST00000542815 CLEC11AQ9Y240 323 aa6.35□□□□□ -1.39
ZEB1-208ENST00000542815 GJA3Q9Y6H8 435 aa6.35□□□□□ -1.39
ZEB1-208ENST00000542815 CEP350Q5VT06 3117 aa6.34□□□□□ -1.39
ZEB1-208ENST00000542815 ADGRA2Q96PE1 1338 aa6.34□□□□□ -1.39
ZEB1-208ENST00000542815 RLBP1P12271 317 aa6.34□□□□□ -1.39
ZEB1-208ENST00000542815 FBXO46Q6PJ61 603 aaPredicted RBP6.34□□□□□ -1.39
ZEB1-208ENST00000542815 BBXQ8WY36 941 aaPredicted RBP6.34□□□□□ -1.39
ZEB1-208ENST00000542815 ZNF428Q96B54 188 aa6.34□□□□□ -1.39
ZEB1-208ENST00000542815 PRDM4Q9UKN5 801 aa6.34□□□□□ -1.39
ZEB1-208ENST00000542815 DDX19BQ9UMR2 479 aa6.34□□□□□ -1.39
ZEB1-208ENST00000542815 MINPP1Q9UNW1 487 aa6.34□□□□□ -1.39
ZEB1-208ENST00000542815 MANSC4A6NHS7 340 aaPredicted RBP6.34□□□□□ -1.39
ZEB1-208ENST00000542815 USP17L8P0C7I0 530 aa6.34□□□□□ -1.39
ZEB1-208ENST00000542815 HCLS1P14317 486 aaPredicted RBP6.34□□□□□ -1.39
ZEB1-208ENST00000542815 PRMT2P55345 433 aa6.34□□□□□ -1.39
ZEB1-208ENST00000542815 KIF23Q02241 960 aaPredicted RBP6.34□□□□□ -1.39
ZEB1-208ENST00000542815 ANKRD18AQ8IVF6 992 aa6.34□□□□□ -1.39
ZEB1-208ENST00000542815 IPO4Q8TEX9 1081 aaKnown RBP6.34□□□□□ -1.39
ZEB1-208ENST00000542815 BEGAINQ9BUH8 593 aa6.34□□□□□ -1.39
ZEB1-208ENST00000542815 BCCIPQ9P287 314 aaKnown RBP eCLIP6.34□□□□□ -1.39
ZEB1-208ENST00000542815 ALDH1L1O75891 902 aa6.33□□□□□ -1.4
ZEB1-208ENST00000542815 SEC24BO95487 1268 aa6.33□□□□□ -1.4
ZEB1-208ENST00000542815 EXOSC9Q06265 439 aaKnown RBP6.33□□□□□ -1.4
ZEB1-208ENST00000542815 RABL6Q3YEC7 729 aaPredicted RBP6.33□□□□□ -1.4
ZEB1-208ENST00000542815 KRT26Q7Z3Y9 468 aa6.33□□□□□ -1.4
ZEB1-208ENST00000542815 USP48Q86UV5 1035 aa6.33□□□□□ -1.4
ZEB1-208ENST00000542815 ITPRIPQ8IWB1 547 aa6.33□□□□□ -1.4
ZEB1-208ENST00000542815 LINS1Q8NG48 757 aa6.33□□□□□ -1.4
ZEB1-208ENST00000542815 ZNF219Q9P2Y4 722 aaPredicted RBP6.33□□□□□ -1.4
ZEB1-208ENST00000542815 PARP14Q460N5 1801 aa6.33□□□□□ -1.4
ZEB1-208ENST00000542815 CCT4P50991 539 aaKnown RBP6.33□□□□□ -1.4
ZEB1-208ENST00000542815 FOXO4P98177 505 aa6.33□□□□□ -1.4
ZEB1-208ENST00000542815 SCARF1Q14162 830 aa6.33□□□□□ -1.4
ZEB1-208ENST00000542815 SLC51AQ86UW1 340 aa6.33□□□□□ -1.4
ZEB1-208ENST00000542815 TSR2Q969E8 191 aaKnown RBP6.33□□□□□ -1.4
ZEB1-208ENST00000542815 SLKQ9H2G2 1235 aaPredicted RBP6.33□□□□□ -1.4
ZEB1-208ENST00000542815 SALL1Q9NSC2 1324 aa6.33□□□□□ -1.4
ZEB1-208ENST00000542815 MAP4K4O95819 1239 aaPredicted RBP6.33□□□□□ -1.4
ZEB1-208ENST00000542815 GCKRQ14397 625 aa6.33□□□□□ -1.4
ZEB1-208ENST00000542815 ATF7IPQ6VMQ6 1270 aa6.33□□□□□ -1.4
ZEB1-208ENST00000542815 HUNKP57058 714 aa6.32□□□□□ -1.4
ZEB1-208ENST00000542815 SPRYD7Q5W111 196 aa6.32□□□□□ -1.4
ZEB1-208ENST00000542815 ZC3H12CQ9C0D7 883 aaKnown RBP6.32□□□□□ -1.4
ZEB1-208ENST00000542815 GGA3Q9NZ52 723 aa6.32□□□□□ -1.4
ZEB1-208ENST00000542815 SERPINA10Q9UK55 444 aa6.32□□□□□ -1.4
ZEB1-208ENST00000542815 ZNF330Q9Y3S2 320 aaPredicted RBP6.32□□□□□ -1.4
ZEB1-208ENST00000542815 MYH2Q9UKX2 1941 aa6.32□□□□□ -1.4
ZEB1-208ENST00000542815 MAP3K10Q02779 954 aa6.32□□□□□ -1.4
ZEB1-208ENST00000542815 NOL9Q5SY16 702 aaKnown RBP6.32□□□□□ -1.4
ZEB1-208ENST00000542815 SULF1Q8IWU6 871 aa6.32□□□□□ -1.4
ZEB1-208ENST00000542815 TBC1D32Q96NH3 1257 aa6.32□□□□□ -1.4
ZEB1-208ENST00000542815 TNNQ9UQP3 1299 aa6.32□□□□□ -1.4
ZEB1-208ENST00000542815 SLC45A1Q9Y2W3 748 aa6.32□□□□□ -1.4
ZEB1-208ENST00000542815 ZSWIM8A7E2V4 1837 aa6.32□□□□□ -1.4
ZEB1-208ENST00000542815 TNRC18O15417 2968 aaPredicted RBP6.32□□□□□ -1.4
ZEB1-208ENST00000542815 SHTN1A0MZ66 631 aa6.31□□□□□ -1.4
ZEB1-208ENST00000542815 NPM3O75607 178 aaKnown RBP6.31□□□□□ -1.4
ZEB1-208ENST00000542815 RAD17O75943 681 aa6.31□□□□□ -1.4
ZEB1-208ENST00000542815 UFL1O94874 794 aa6.31□□□□□ -1.4
ZEB1-208ENST00000542815 EGFRP00533 1210 aa6.31□□□□□ -1.4
ZEB1-208ENST00000542815 SSH1Q8WYL5 1049 aa6.31□□□□□ -1.4
ZEB1-208ENST00000542815 FAM89AQ96GI7 184 aa6.31□□□□□ -1.4
ZEB1-208ENST00000542815 NOB1Q9ULX3 412 aaKnown RBP6.31□□□□□ -1.4
ZEB1-208ENST00000542815 ADM5C9JUS6 153 aa6.31□□□□□ -1.4
ZEB1-208ENST00000542815 TRIM27P14373 513 aa6.31□□□□□ -1.4
ZEB1-208ENST00000542815 NCLP19338 710 aaKnown RBP6.31□□□□□ -1.4
ZEB1-208ENST00000542815 HDAC1Q13547 482 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-208ENST00000542815 C8orf58Q8NAV2 365 aa6.31□□□□□ -1.4
ZEB1-208ENST00000542815 TDRD7Q8NHU6 1098 aaKnown RBP6.31□□□□□ -1.4
ZEB1-208ENST00000542815 HPS5Q9UPZ3 1129 aa6.31□□□□□ -1.4
ZEB1-208ENST00000542815 ATRNL1Q5VV63 1379 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms