RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 ZAP70P43403 619 aa7.69□□□□□ -1.18
PTPRO-208ENST00000542557 SCARF1Q14162 830 aa7.69□□□□□ -1.18
PTPRO-208ENST00000542557 TTF1Q15361 905 aaPredicted RBP7.69□□□□□ -1.18
PTPRO-208ENST00000542557 HLFQ16534 295 aa7.69□□□□□ -1.18
PTPRO-208ENST00000542557 MB21D2Q8IYB1 491 aaPredicted RBP7.69□□□□□ -1.18
PTPRO-208ENST00000542557 DDX11Q96FC9 970 aa7.69□□□□□ -1.18
PTPRO-208ENST00000542557 PGBD1Q96JS3 809 aa7.69□□□□□ -1.18
PTPRO-208ENST00000542557 GREM2Q9H772 168 aa7.69□□□□□ -1.18
PTPRO-208ENST00000542557 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.69□□□□□ -1.18
PTPRO-208ENST00000542557 LAMB2P55268 1798 aa7.69□□□□□ -1.18
PTPRO-208ENST00000542557 CARMIL3Q8ND23 1372 aa7.69□□□□□ -1.18
PTPRO-208ENST00000542557 ROBO1Q9Y6N7 1651 aa7.69□□□□□ -1.18
PTPRO-208ENST00000542557 NRAPQ86VF7 1730 aa7.69□□□□□ -1.18
PTPRO-208ENST00000542557 A0A0G2JLW4 131 aa7.69□□□□□ -1.18
PTPRO-208ENST00000542557 IRS4O14654 1257 aaPredicted RBP7.69□□□□□ -1.18
PTPRO-208ENST00000542557 PDE8AO60658 829 aa7.69□□□□□ -1.18
PTPRO-208ENST00000542557 CAVIN2O95810 425 aa7.69□□□□□ -1.18
PTPRO-208ENST00000542557 ADD1P35611 737 aaKnown RBP7.69□□□□□ -1.18
PTPRO-208ENST00000542557 TYRO3Q06418 890 aa7.69□□□□□ -1.18
PTPRO-208ENST00000542557 KIAA2012Q0VF49 1180 aa7.69□□□□□ -1.18
PTPRO-208ENST00000542557 WASHC4Q2M389 1173 aa7.69□□□□□ -1.18
PTPRO-208ENST00000542557 LDHAL6AQ6ZMR3 332 aa7.69□□□□□ -1.18
PTPRO-208ENST00000542557 TFIP11Q9UBB9 837 aaKnown RBP7.69□□□□□ -1.18
PTPRO-208ENST00000542557 RCOR1Q9UKL0 485 aa7.69□□□□□ -1.18
PTPRO-208ENST00000542557 ZBTB1Q9Y2K1 713 aa7.69□□□□□ -1.18
PTPRO-208ENST00000542557 MRVI1Q9Y6F6 885 aa7.69□□□□□ -1.18
PTPRO-208ENST00000542557 DOCK2Q92608 1830 aa7.69□□□□□ -1.18
PTPRO-208ENST00000542557 GPAA1O43292 621 aa7.68□□□□□ -1.18
PTPRO-208ENST00000542557 TPM3P06753 285 aa7.68□□□□□ -1.18
PTPRO-208ENST00000542557 ARID4AP29374 1257 aaPredicted RBP7.68□□□□□ -1.18
PTPRO-208ENST00000542557 ADD2P35612 726 aa7.68□□□□□ -1.18
PTPRO-208ENST00000542557 MCAMP43121 646 aa7.68□□□□□ -1.18
PTPRO-208ENST00000542557 TTLL5Q6EMB2 1281 aa7.68□□□□□ -1.18
PTPRO-208ENST00000542557 BICD2Q8TD16 824 aa7.68□□□□□ -1.18
PTPRO-208ENST00000542557 ZNF396Q96N95 335 aaPredicted RBP7.68□□□□□ -1.18
PTPRO-208ENST00000542557 C4AP0C0L4 1744 aa7.68□□□□□ -1.18
PTPRO-208ENST00000542557 C4BP0C0L5 1744 aa7.68□□□□□ -1.18
PTPRO-208ENST00000542557 PHLPP1O60346 1717 aa7.68□□□□□ -1.18
PTPRO-208ENST00000542557 KDM4FA0A1W2PPD8 638 aa7.68□□□□□ -1.18
PTPRO-208ENST00000542557 DHX16O60231 1041 aaKnown RBP7.68□□□□□ -1.18
PTPRO-208ENST00000542557 FGAP02671 866 aa7.68□□□□□ -1.18
PTPRO-208ENST00000542557 UQCRFS1P1P0C7P4 283 aa7.68□□□□□ -1.18
PTPRO-208ENST00000542557 GPTP24298 496 aa7.68□□□□□ -1.18
PTPRO-208ENST00000542557 UBE3CQ15386 1083 aa7.68□□□□□ -1.18
PTPRO-208ENST00000542557 ZNF34Q8IZ26 560 aa7.68□□□□□ -1.18
PTPRO-208ENST00000542557 NCOA7Q8NI08 942 aa7.68□□□□□ -1.18
PTPRO-208ENST00000542557 CCDC85AQ96PX6 553 aaPredicted RBP7.68□□□□□ -1.18
PTPRO-208ENST00000542557 CDCA7Q9BWT1 371 aaPredicted RBP7.68□□□□□ -1.18
PTPRO-208ENST00000542557 PUS7LQ9H0K6 701 aaKnown RBP7.68□□□□□ -1.18
PTPRO-208ENST00000542557 CNNM1Q9NRU3 951 aa7.68□□□□□ -1.18
PTPRO-208ENST00000542557 MROH5Q6ZUA9 1318 aa7.68□□□□□ -1.18
PTPRO-208ENST00000542557 SLIT2O94813 1529 aa7.68□□□□□ -1.18
PTPRO-208ENST00000542557 EXOC5O00471 708 aa7.68□□□□□ -1.18
PTPRO-208ENST00000542557 CTAGE5O15320 804 aa7.68□□□□□ -1.18
PTPRO-208ENST00000542557 PDE8BO95263 885 aa7.68□□□□□ -1.18
PTPRO-208ENST00000542557 PIBF1Q8WXW3 757 aa7.68□□□□□ -1.18
PTPRO-208ENST00000542557 ARID3AQ99856 593 aa7.68□□□□□ -1.18
PTPRO-208ENST00000542557 TRMT112Q9UI30 125 aaKnown RBP7.68□□□□□ -1.18
PTPRO-208ENST00000542557 ZMYM6O95789 1325 aa7.68□□□□□ -1.18
PTPRO-208ENST00000542557 TIAM2Q8IVF5 1701 aa7.67□□□□□ -1.18
PTPRO-208ENST00000542557 PRC1O43663 620 aa7.67□□□□□ -1.18
PTPRO-208ENST00000542557 NR1I2O75469 434 aa7.67□□□□□ -1.18
PTPRO-208ENST00000542557 CCT2P78371 535 aaKnown RBP7.67□□□□□ -1.18
PTPRO-208ENST00000542557 DZIP3Q86Y13 1208 aaKnown RBP7.67□□□□□ -1.18
PTPRO-208ENST00000542557 IFNLR1Q8IU57 520 aaPredicted RBP7.67□□□□□ -1.18
PTPRO-208ENST00000542557 SYNE4Q8N205 404 aa7.67□□□□□ -1.18
PTPRO-208ENST00000542557 NCOA5Q9HCD5 579 aaKnown RBP7.67□□□□□ -1.18
PTPRO-208ENST00000542557 UBN2Q6ZU65 1347 aa7.67□□□□□ -1.18
PTPRO-208ENST00000542557 RTL9Q8NET4 1388 aa7.67□□□□□ -1.18
PTPRO-208ENST00000542557 ZNF213O14771 459 aa7.67□□□□□ -1.18
PTPRO-208ENST00000542557 FDPSP14324 419 aaKnown RBP7.67□□□□□ -1.18
PTPRO-208ENST00000542557 FGFR2P21802 821 aa7.67□□□□□ -1.18
PTPRO-208ENST00000542557 VASPP50552 380 aaPredicted RBP7.67□□□□□ -1.18
PTPRO-208ENST00000542557 PUM3Q15397 648 aaKnown RBP7.67□□□□□ -1.18
PTPRO-208ENST00000542557 RALYLQ86SE5 291 aaKnown RBP7.67□□□□□ -1.18
PTPRO-208ENST00000542557 TDRD7Q8NHU6 1098 aaKnown RBP7.67□□□□□ -1.18
PTPRO-208ENST00000542557 LPIN2Q92539 896 aa7.67□□□□□ -1.18
PTPRO-208ENST00000542557 GOLGA6L6A8MZA4 724 aa7.66□□□□□ -1.18
PTPRO-208ENST00000542557 AP5Z1O43299 807 aa7.66□□□□□ -1.18
PTPRO-208ENST00000542557 EIF5P55010 431 aaKnown RBP7.66□□□□□ -1.18
PTPRO-208ENST00000542557 ANTXR2P58335 489 aa7.66□□□□□ -1.18
PTPRO-208ENST00000542557 CAMK4Q16566 473 aa7.66□□□□□ -1.18
PTPRO-208ENST00000542557 SASS6Q6UVJ0 657 aa7.66□□□□□ -1.18
PTPRO-208ENST00000542557 PI16Q6UXB8 463 aa7.66□□□□□ -1.18
PTPRO-208ENST00000542557 USP28Q96RU2 1077 aa7.66□□□□□ -1.18
PTPRO-208ENST00000542557 KLF18A0A0U1RQI7 1052 aa7.66□□□□□ -1.18
PTPRO-208ENST00000542557 GOLGA8BA8MQT2 603 aa7.66□□□□□ -1.18
PTPRO-208ENST00000542557 HAND2P61296 217 aa7.66□□□□□ -1.18
PTPRO-208ENST00000542557 ANO6Q4KMQ2 910 aa7.66□□□□□ -1.18
PTPRO-208ENST00000542557 CCDC102BQ68D86 513 aa7.66□□□□□ -1.18
PTPRO-208ENST00000542557 CHST3Q7LGC8 479 aa7.66□□□□□ -1.18
PTPRO-208ENST00000542557 ILDR1Q86SU0 546 aaPredicted RBP7.66□□□□□ -1.18
PTPRO-208ENST00000542557 CKAP2LQ8IYA6 745 aa7.66□□□□□ -1.18
PTPRO-208ENST00000542557 CBX8Q9HC52 389 aa7.66□□□□□ -1.18
PTPRO-208ENST00000542557 TBC1D2BQ9UPU7 963 aa7.66□□□□□ -1.18
PTPRO-208ENST00000542557 HPS5Q9UPZ3 1129 aa7.66□□□□□ -1.18
PTPRO-208ENST00000542557 THRAP3Q9Y2W1 955 aaKnown RBP7.66□□□□□ -1.18
PTPRO-208ENST00000542557 ZNF831Q5JPB2 1677 aa7.66□□□□□ -1.18
PTPRO-208ENST00000542557 MYO5AQ9Y4I1 1855 aaKnown RBP7.66□□□□□ -1.18
PTPRO-208ENST00000542557 BCORQ6W2J9 1755 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms