RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 HDAC5Q9UQL6 1122 aa25.38■■□□□ 1.65
DDB1-220ENST00000542337 POLR2AP24928 1970 aaKnown RBP25.38■■□□□ 1.65
DDB1-220ENST00000542337 TTLL12Q14166 644 aaPredicted RBP25.37■■□□□ 1.65
DDB1-220ENST00000542337 NOB1Q9ULX3 412 aaKnown RBP25.37■■□□□ 1.65
DDB1-220ENST00000542337 F8W031 263 aaPredicted RBP25.36■■□□□ 1.65
DDB1-220ENST00000542337 MYO1BO43795 1136 aa25.36■■□□□ 1.65
DDB1-220ENST00000542337 SCAF8Q9UPN6 1271 aaKnown RBP25.36■■□□□ 1.65
DDB1-220ENST00000542337 THSD7BQ9C0I4 1608 aa25.36■■□□□ 1.65
DDB1-220ENST00000542337 GYG1P46976 350 aa25.35■■□□□ 1.65
DDB1-220ENST00000542337 CAVIN4Q5BKX8 364 aa25.35■■□□□ 1.65
DDB1-220ENST00000542337 CERS5Q8N5B7 392 aa25.35■■□□□ 1.65
DDB1-220ENST00000542337 FAM155AB1AL88 458 aaPredicted RBP25.34■■□□□ 1.65
DDB1-220ENST00000542337 PRAMEF18Q5VWM3 479 aa25.34■■□□□ 1.65
DDB1-220ENST00000542337 MTMR14Q8NCE2 650 aa25.34■■□□□ 1.65
DDB1-220ENST00000542337 TDRD7Q8NHU6 1098 aaKnown RBP25.34■■□□□ 1.65
DDB1-220ENST00000542337 ZBED3Q96IU2 234 aaPredicted RBP25.34■■□□□ 1.65
DDB1-220ENST00000542337 FAM84BQ96KN1 310 aaPredicted RBP25.34■■□□□ 1.65
DDB1-220ENST00000542337 JAG2Q9Y219 1238 aa25.34■■□□□ 1.65
DDB1-220ENST00000542337 FRAT2O75474 233 aaPredicted RBP25.33■■□□□ 1.65
DDB1-220ENST00000542337 UBTFL1P0CB47 393 aaPredicted RBP25.33■■□□□ 1.65
DDB1-220ENST00000542337 RBM5P52756 815 aaKnown RBP eCLIP25.33■■□□□ 1.65
DDB1-220ENST00000542337 KIF23Q02241 960 aaPredicted RBP25.33■■□□□ 1.65
DDB1-220ENST00000542337 LRRC24Q50LG9 513 aa25.33■■□□□ 1.65
DDB1-220ENST00000542337 REM2Q8IYK8 340 aaPredicted RBP25.33■■□□□ 1.65
DDB1-220ENST00000542337 FAM205AQ6ZU69 1335 aa25.33■■□□□ 1.64
DDB1-220ENST00000542337 PDE8BO95263 885 aa25.32■■□□□ 1.64
DDB1-220ENST00000542337 SLC10A3P09131 477 aa25.32■■□□□ 1.64
DDB1-220ENST00000542337 CFAP100Q494V2 611 aa25.32■■□□□ 1.64
DDB1-220ENST00000542337 ZIC5Q96T25 663 aa25.32■■□□□ 1.64
DDB1-220ENST00000542337 TSKSQ9UJT2 592 aa25.32■■□□□ 1.64
DDB1-220ENST00000542337 UBE2Q2LH0YL09 131 aa25.31■■□□□ 1.64
DDB1-220ENST00000542337 RARSP54136 660 aaKnown RBP25.31■■□□□ 1.64
DDB1-220ENST00000542337 MFSD14BQ5SR56 506 aa25.31■■□□□ 1.64
DDB1-220ENST00000542337 ARMC9Q7Z3E5 817 aa25.31■■□□□ 1.64
DDB1-220ENST00000542337 KLHDC4Q8TBB5 520 aa25.3■■□□□ 1.64
DDB1-220ENST00000542337 KIF16BQ96L93 1317 aa25.3■■□□□ 1.64
DDB1-220ENST00000542337 IFIT1P09914 478 aaKnown RBP25.29■■□□□ 1.64
DDB1-220ENST00000542337 FBXO33Q7Z6M2 555 aa25.29■■□□□ 1.64
DDB1-220ENST00000542337 DEFB129Q9H1M3 183 aa25.29■■□□□ 1.64
DDB1-220ENST00000542337 SPDYE2BA6NHP3 402 aa25.28■■□□□ 1.64
DDB1-220ENST00000542337 EYA2O00167 538 aa25.28■■□□□ 1.64
DDB1-220ENST00000542337 SPDYE6P0CI01 402 aa25.28■■□□□ 1.64
DDB1-220ENST00000542337 PUM3Q15397 648 aaKnown RBP25.28■■□□□ 1.64
DDB1-220ENST00000542337 MOB2Q70IA6 237 aa25.28■■□□□ 1.64
DDB1-220ENST00000542337 RASAL3Q86YV0 1011 aa25.28■■□□□ 1.64
DDB1-220ENST00000542337 ARHGAP45Q92619 1136 aa25.28■■□□□ 1.64
DDB1-220ENST00000542337 TTF2Q9UNY4 1162 aaKnown RBP25.28■■□□□ 1.64
DDB1-220ENST00000542337 PPP2R3BQ9Y5P8 575 aa25.28■■□□□ 1.64
DDB1-220ENST00000542337 PAPPA2Q9BXP8 1791 aa25.27■■□□□ 1.64
DDB1-220ENST00000542337 IPO8O15397 1037 aaKnown RBP25.27■■□□□ 1.64
DDB1-220ENST00000542337 DIEXFQ68CQ4 756 aaKnown RBP25.27■■□□□ 1.64
DDB1-220ENST00000542337 TBC1D22AQ8WUA7 517 aa25.27■■□□□ 1.64
DDB1-220ENST00000542337 PRMT6Q96LA8 375 aaPredicted RBP25.27■■□□□ 1.64
DDB1-220ENST00000542337 VEZTQ9HBM0 779 aa25.27■■□□□ 1.64
DDB1-220ENST00000542337 SAGE1Q9NXZ1 904 aa25.27■■□□□ 1.64
DDB1-220ENST00000542337 CHAF1AQ13111 956 aaPredicted RBP25.26■■□□□ 1.63
DDB1-220ENST00000542337 SUPT20HL1Q3ZLR7 823 aa25.26■■□□□ 1.63
DDB1-220ENST00000542337 VGLL2Q8N8G2 317 aa25.26■■□□□ 1.63
DDB1-220ENST00000542337 SERPINA10Q9UK55 444 aa25.26■■□□□ 1.63
DDB1-220ENST00000542337 COL1A1P02452 1464 aaPredicted RBP25.26■■□□□ 1.63
DDB1-220ENST00000542337 A0A1B0GUL6 1792 aa25.26■■□□□ 1.63
DDB1-220ENST00000542337 ZNF646O15015 1829 aaPredicted RBP25.26■■□□□ 1.63
DDB1-220ENST00000542337 CLRN2A0PK11 232 aa25.25■■□□□ 1.63
DDB1-220ENST00000542337 SLC5A1P13866 664 aa25.25■■□□□ 1.63
DDB1-220ENST00000542337 PRKG1Q13976 671 aa25.25■■□□□ 1.63
DDB1-220ENST00000542337 CSRNP1Q96S65 589 aa25.25■■□□□ 1.63
DDB1-220ENST00000542337 FBXO3Q9UK99 471 aa25.25■■□□□ 1.63
DDB1-220ENST00000542337 IQSEC3Q9UPP2 1182 aaPredicted RBP25.25■■□□□ 1.63
DDB1-220ENST00000542337 PPP1R12BO60237 982 aaPredicted RBP25.24■■□□□ 1.63
DDB1-220ENST00000542337 RFX5P48382 616 aaPredicted RBP25.24■■□□□ 1.63
DDB1-220ENST00000542337 PTPN12Q05209 780 aaKnown RBP25.24■■□□□ 1.63
DDB1-220ENST00000542337 PCDHAC2Q9Y5I4 1007 aa25.24■■□□□ 1.63
DDB1-220ENST00000542337 TRPA1O75762 1119 aa25.23■■□□□ 1.63
DDB1-220ENST00000542337 BCAMP50895 628 aa25.23■■□□□ 1.63
DDB1-220ENST00000542337 TNFAIP1Q13829 316 aa25.23■■□□□ 1.63
DDB1-220ENST00000542337 MIER1Q8N108 512 aa25.23■■□□□ 1.63
DDB1-220ENST00000542337 LPIN2Q92539 896 aa25.23■■□□□ 1.63
DDB1-220ENST00000542337 RNF186Q9NXI6 227 aa25.23■■□□□ 1.63
DDB1-220ENST00000542337 CEP126Q9P2H0 1117 aa25.23■■□□□ 1.63
DDB1-220ENST00000542337 ANGEL1Q9UNK9 670 aaKnown RBP25.23■■□□□ 1.63
DDB1-220ENST00000542337 LRRFIP2Q9Y608 721 aaKnown RBP25.23■■□□□ 1.63
DDB1-220ENST00000542337 CIAO1O76071 339 aa25.22■■□□□ 1.63
DDB1-220ENST00000542337 GNAI3P08754 354 aa25.22■■□□□ 1.63
DDB1-220ENST00000542337 FGFR2P21802 821 aa25.21■■□□□ 1.63
DDB1-220ENST00000542337 INTS3Q68E01 1043 aaKnown RBP25.21■■□□□ 1.63
DDB1-220ENST00000542337 SIL1Q9H173 461 aa25.21■■□□□ 1.63
DDB1-220ENST00000542337 CRKP46108 304 aa25.2■■□□□ 1.62
DDB1-220ENST00000542337 HDLBPQ00341 1268 aaKnown RBP25.2■■□□□ 1.62
DDB1-220ENST00000542337 HNRNPUQ00839 825 aaKnown RBP eCLIP25.2■■□□□ 1.62
DDB1-220ENST00000542337 DZIP1LQ8IYY4 767 aaKnown RBP25.2■■□□□ 1.62
DDB1-220ENST00000542337 ABHD8Q96I13 439 aa25.2■■□□□ 1.62
DDB1-220ENST00000542337 ZNF70Q9UC06 446 aaPredicted RBP25.2■■□□□ 1.62
DDB1-220ENST00000542337 RASA3Q14644 834 aa25.19■■□□□ 1.62
DDB1-220ENST00000542337 SPDYE2Q495Y8 402 aa25.19■■□□□ 1.62
DDB1-220ENST00000542337 LDLRAD1Q5T700 205 aa25.19■■□□□ 1.62
DDB1-220ENST00000542337 FRAT1Q92837 279 aaPredicted RBP25.19■■□□□ 1.62
DDB1-220ENST00000542337 SLC10A4Q96EP9 437 aa25.19■■□□□ 1.62
DDB1-220ENST00000542337 MEIS3Q99687 375 aa25.19■■□□□ 1.62
DDB1-220ENST00000542337 TDRD3Q9H7E2 651 aaKnown RBP25.19■■□□□ 1.62
DDB1-220ENST00000542337 GNL3LQ9NVN8 582 aaKnown RBP25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms