RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 PPP2R3BQ9Y5P8 575 aa19.63■□□□□ 0.73
RTN3-211ENST00000542238 A0A1B0GUL6 1792 aa19.62■□□□□ 0.73
RTN3-211ENST00000542238 FANCIQ9NVI1 1328 aa19.62■□□□□ 0.73
RTN3-211ENST00000542238 MANSC4A6NHS7 340 aaPredicted RBP19.62■□□□□ 0.73
RTN3-211ENST00000542238 PPP1R12BO60237 982 aaPredicted RBP19.62■□□□□ 0.73
RTN3-211ENST00000542238 CCDC184Q52MB2 194 aa19.62■□□□□ 0.73
RTN3-211ENST00000542238 VAMP4O75379 141 aa19.61■□□□□ 0.73
RTN3-211ENST00000542238 IL1R1P14778 569 aa19.61■□□□□ 0.73
RTN3-211ENST00000542238 SUPT20HL1Q3ZLR7 823 aa19.61■□□□□ 0.73
RTN3-211ENST00000542238 CERS5Q8N5B7 392 aa19.61■□□□□ 0.73
RTN3-211ENST00000542238 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.61■□□□□ 0.73
RTN3-211ENST00000542238 IRS2Q9Y4H2 1338 aa19.6■□□□□ 0.73
RTN3-211ENST00000542238 F8W031 263 aaPredicted RBP19.6■□□□□ 0.73
RTN3-211ENST00000542238 SNAP23O00161 211 aa19.6■□□□□ 0.73
RTN3-211ENST00000542238 ZBTB48P10074 688 aaPredicted RBP19.6■□□□□ 0.73
RTN3-211ENST00000542238 FKBP1AP62942 108 aaKnown RBP19.6■□□□□ 0.73
RTN3-211ENST00000542238 FOXO4P98177 505 aa19.6■□□□□ 0.73
RTN3-211ENST00000542238 MAP3K11Q16584 847 aa19.6■□□□□ 0.73
RTN3-211ENST00000542238 CFAP100Q494V2 611 aa19.6■□□□□ 0.73
RTN3-211ENST00000542238 TAF7LQ5H9L4 462 aa19.6■□□□□ 0.73
RTN3-211ENST00000542238 FZD1Q9UP38 647 aa19.6■□□□□ 0.73
RTN3-211ENST00000542238 UNCXA6NJT0 531 aa19.59■□□□□ 0.73
RTN3-211ENST00000542238 CCDC57Q2TAC2 916 aa19.59■□□□□ 0.73
RTN3-211ENST00000542238 PRPF38BQ5VTL8 546 aaKnown RBP19.59■□□□□ 0.73
RTN3-211ENST00000542238 WDR63Q8IWG1 891 aa19.59■□□□□ 0.73
RTN3-211ENST00000542238 PCDH10Q9P2E7 1040 aa19.59■□□□□ 0.73
RTN3-211ENST00000542238 SPDYE2BA6NHP3 402 aa19.58■□□□□ 0.72
RTN3-211ENST00000542238 PLIN1O60240 522 aa19.58■□□□□ 0.72
RTN3-211ENST00000542238 SPDYE6P0CI01 402 aa19.58■□□□□ 0.72
RTN3-211ENST00000542238 RBM5P52756 815 aaKnown RBP eCLIP19.58■□□□□ 0.72
RTN3-211ENST00000542238 BEND3Q5T5X7 828 aa19.58■□□□□ 0.72
RTN3-211ENST00000542238 LMBR1LQ6UX01 489 aa19.58■□□□□ 0.72
RTN3-211ENST00000542238 LDHAL6AQ6ZMR3 332 aa19.58■□□□□ 0.72
RTN3-211ENST00000542238 IFNL1Q8IU54 200 aa19.58■□□□□ 0.72
RTN3-211ENST00000542238 R3HDMLQ9H3Y0 253 aa19.58■□□□□ 0.72
RTN3-211ENST00000542238 VEZTQ9HBM0 779 aa19.58■□□□□ 0.72
RTN3-211ENST00000542238 CLRN2A0PK11 232 aa19.57■□□□□ 0.72
RTN3-211ENST00000542238 F6X3S4 739 aa19.57■□□□□ 0.72
RTN3-211ENST00000542238 IREB2P48200 963 aaKnown RBP19.57■□□□□ 0.72
RTN3-211ENST00000542238 EXOSC9Q06265 439 aaKnown RBP19.57■□□□□ 0.72
RTN3-211ENST00000542238 WNK4Q96J92 1243 aa19.57■□□□□ 0.72
RTN3-211ENST00000542238 PRMT6Q96LA8 375 aaPredicted RBP19.57■□□□□ 0.72
RTN3-211ENST00000542238 CNNM1Q9NRU3 951 aa19.57■□□□□ 0.72
RTN3-211ENST00000542238 SALL2Q9Y467 1007 aaPredicted RBP19.57■□□□□ 0.72
RTN3-211ENST00000542238 LAMB1P07942 1786 aa19.57■□□□□ 0.72
RTN3-211ENST00000542238 OTUD7BQ6GQQ9 843 aa19.56■□□□□ 0.72
RTN3-211ENST00000542238 CLMNQ96JQ2 1002 aa19.56■□□□□ 0.72
RTN3-211ENST00000542238 MRS2Q9HD23 443 aa19.56■□□□□ 0.72
RTN3-211ENST00000542238 C9orf78Q9NZ63 289 aaPredicted RBP19.56■□□□□ 0.72
RTN3-211ENST00000542238 JAG2Q9Y219 1238 aa19.56■□□□□ 0.72
RTN3-211ENST00000542238 PCDHAC2Q9Y5I4 1007 aa19.56■□□□□ 0.72
RTN3-211ENST00000542238 SSC5DA1L4H1 1573 aa19.55■□□□□ 0.72
RTN3-211ENST00000542238 GRM8O00222 908 aa19.55■□□□□ 0.72
RTN3-211ENST00000542238 NBPF12Q5TAG4 269 aaPredicted RBP19.55■□□□□ 0.72
RTN3-211ENST00000542238 ZNF594Q96JF6 807 aaPredicted RBP19.55■□□□□ 0.72
RTN3-211ENST00000542238 TNFAIP1Q13829 316 aa19.54■□□□□ 0.72
RTN3-211ENST00000542238 ANKRD13AQ8IZ07 590 aa19.54■□□□□ 0.72
RTN3-211ENST00000542238 TRIM17Q9Y577 477 aa19.54■□□□□ 0.72
RTN3-211ENST00000542238 IGF2BP3O00425 579 aaKnown RBP eCLIP19.53■□□□□ 0.72
RTN3-211ENST00000542238 RASA3Q14644 834 aa19.53■□□□□ 0.72
RTN3-211ENST00000542238 EPHA10Q5JZY3 1008 aa19.53■□□□□ 0.72
RTN3-211ENST00000542238 FAM205AQ6ZU69 1335 aa19.52■□□□□ 0.72
RTN3-211ENST00000542238 USP2O75604 605 aaPredicted RBP19.52■□□□□ 0.72
RTN3-211ENST00000542238 UBE4AQ14139 1066 aa19.52■□□□□ 0.72
RTN3-211ENST00000542238 MFSD14BQ5SR56 506 aa19.52■□□□□ 0.72
RTN3-211ENST00000542238 ERO1AQ96HE7 468 aa19.52■□□□□ 0.72
RTN3-211ENST00000542238 TTF2Q9UNY4 1162 aaKnown RBP19.52■□□□□ 0.72
RTN3-211ENST00000542238 ALDH1L1O75891 902 aa19.51■□□□□ 0.71
RTN3-211ENST00000542238 HIBADHP31937 336 aaKnown RBP19.51■□□□□ 0.71
RTN3-211ENST00000542238 INTS3Q68E01 1043 aaKnown RBP19.51■□□□□ 0.71
RTN3-211ENST00000542238 SLC4A10Q6U841 1118 aa19.51■□□□□ 0.71
RTN3-211ENST00000542238 OTOP1Q7RTM1 612 aa19.51■□□□□ 0.71
RTN3-211ENST00000542238 TDRD7Q8NHU6 1098 aaKnown RBP19.51■□□□□ 0.71
RTN3-211ENST00000542238 SERPINA10Q9UK55 444 aa19.51■□□□□ 0.71
RTN3-211ENST00000542238 SPDYE2Q495Y8 402 aa19.5■□□□□ 0.71
RTN3-211ENST00000542238 SRCIN1Q9C0H9 1055 aa19.5■□□□□ 0.71
RTN3-211ENST00000542238 ZNF70Q9UC06 446 aaPredicted RBP19.5■□□□□ 0.71
RTN3-211ENST00000542238 AOX1Q06278 1338 aa19.5■□□□□ 0.71
RTN3-211ENST00000542238 ARAP2Q8WZ64 1704 aa19.49■□□□□ 0.71
RTN3-211ENST00000542238 GYG1P46976 350 aa19.49■□□□□ 0.71
RTN3-211ENST00000542238 CRHR2Q13324 411 aa19.49■□□□□ 0.71
RTN3-211ENST00000542238 TDRD3Q9H7E2 651 aaKnown RBP19.49■□□□□ 0.71
RTN3-211ENST00000542238 OTOFQ9HC10 1997 aa19.49■□□□□ 0.71
RTN3-211ENST00000542238 ANP32CO43423 234 aa19.48■□□□□ 0.71
RTN3-211ENST00000542238 TNNI2P48788 182 aa19.48■□□□□ 0.71
RTN3-211ENST00000542238 VPS37DQ86XT2 251 aa19.48■□□□□ 0.71
RTN3-211ENST00000542238 DZIP1LQ8IYY4 767 aaKnown RBP19.48■□□□□ 0.71
RTN3-211ENST00000542238 FAM84BQ96KN1 310 aaPredicted RBP19.48■□□□□ 0.71
RTN3-211ENST00000542238 ELP3Q9H9T3 547 aa19.48■□□□□ 0.71
RTN3-211ENST00000542238 GJA5P36382 358 aa19.47■□□□□ 0.71
RTN3-211ENST00000542238 CD99L2Q8TCZ2 262 aa19.47■□□□□ 0.71
RTN3-211ENST00000542238 OPTNQ96CV9 577 aa19.47■□□□□ 0.71
RTN3-211ENST00000542238 EFCC1Q9HA90 598 aa19.47■□□□□ 0.71
RTN3-211ENST00000542238 PTPN22Q9Y2R2 807 aa19.47■□□□□ 0.71
RTN3-211ENST00000542238 MROH5Q6ZUA9 1318 aa19.47■□□□□ 0.71
RTN3-211ENST00000542238 TESPA1A2RU30 521 aaPredicted RBP19.46■□□□□ 0.71
RTN3-211ENST00000542238 SP3Q02447 781 aa19.46■□□□□ 0.71
RTN3-211ENST00000542238 PTPN18Q99952 460 aa19.46■□□□□ 0.71
RTN3-211ENST00000542238 PUS3Q9BZE2 481 aaKnown RBP19.46■□□□□ 0.71
RTN3-211ENST00000542238 SPINK5Q9NQ38 1064 aaPredicted RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms