RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 ZIC5Q96T25 663 aa14.31□□□□□ -0.12
VTN-203ENST00000542029 RIPOR2Q9Y4F9 1068 aa14.31□□□□□ -0.12
VTN-203ENST00000542029 PPP2R3BQ9Y5P8 575 aa14.31□□□□□ -0.12
VTN-203ENST00000542029 VPS37DQ86XT2 251 aa14.3□□□□□ -0.12
VTN-203ENST00000542029 RASAL3Q86YV0 1011 aa14.3□□□□□ -0.12
VTN-203ENST00000542029 TRMT2AQ8IZ69 625 aaKnown RBP14.3□□□□□ -0.12
VTN-203ENST00000542029 CERS5Q8N5B7 392 aa14.3□□□□□ -0.12
VTN-203ENST00000542029 TDRD7Q8NHU6 1098 aaKnown RBP14.3□□□□□ -0.12
VTN-203ENST00000542029 USP44Q9H0E7 712 aa14.3□□□□□ -0.12
VTN-203ENST00000542029 TSKSQ9UJT2 592 aa14.3□□□□□ -0.12
VTN-203ENST00000542029 MYH3P11055 1940 aa14.3□□□□□ -0.12
VTN-203ENST00000542029 FAM205AQ6ZU69 1335 aa14.3□□□□□ -0.12
VTN-203ENST00000542029 CAVIN4Q5BKX8 364 aa14.29□□□□□ -0.12
VTN-203ENST00000542029 METTL24Q5JXM2 366 aa14.29□□□□□ -0.12
VTN-203ENST00000542029 ANKRD44Q8N8A2 993 aa14.29□□□□□ -0.12
VTN-203ENST00000542029 CDCA7LQ96GN5 454 aa14.29□□□□□ -0.12
VTN-203ENST00000542029 ABHD8Q96I13 439 aa14.29□□□□□ -0.12
VTN-203ENST00000542029 FAM84BQ96KN1 310 aaPredicted RBP14.29□□□□□ -0.12
VTN-203ENST00000542029 CSRNP1Q96S65 589 aa14.29□□□□□ -0.12
VTN-203ENST00000542029 SPDYE2BA6NHP3 402 aa14.28□□□□□ -0.12
VTN-203ENST00000542029 UBE2Q2LH0YL09 131 aa14.28□□□□□ -0.12
VTN-203ENST00000542029 SPDYE6P0CI01 402 aa14.28□□□□□ -0.12
VTN-203ENST00000542029 SUPT20HL1Q3ZLR7 823 aa14.28□□□□□ -0.12
VTN-203ENST00000542029 CFAP100Q494V2 611 aa14.28□□□□□ -0.12
VTN-203ENST00000542029 MFSD14BQ5SR56 506 aa14.28□□□□□ -0.12
VTN-203ENST00000542029 PRAMEF18Q5VWM3 479 aa14.28□□□□□ -0.12
VTN-203ENST00000542029 PUS3Q9BZE2 481 aaKnown RBP14.28□□□□□ -0.12
VTN-203ENST00000542029 API5Q9BZZ5 524 aaKnown RBP14.28□□□□□ -0.12
VTN-203ENST00000542029 DEFB129Q9H1M3 183 aa14.28□□□□□ -0.12
VTN-203ENST00000542029 RNF186Q9NXI6 227 aa14.28□□□□□ -0.12
VTN-203ENST00000542029 COL1A1P02452 1464 aaPredicted RBP14.27□□□□□ -0.12
VTN-203ENST00000542029 UNCXA6NJT0 531 aa14.27□□□□□ -0.13
VTN-203ENST00000542029 F8W031 263 aaPredicted RBP14.27□□□□□ -0.13
VTN-203ENST00000542029 PPP1R12BO60237 982 aaPredicted RBP14.27□□□□□ -0.13
VTN-203ENST00000542029 PDE8BO95263 885 aa14.27□□□□□ -0.13
VTN-203ENST00000542029 GYG1P46976 350 aa14.27□□□□□ -0.13
VTN-203ENST00000542029 RBM5P52756 815 aaKnown RBP eCLIP14.27□□□□□ -0.13
VTN-203ENST00000542029 TNFAIP1Q13829 316 aa14.27□□□□□ -0.13
VTN-203ENST00000542029 FBXO33Q7Z6M2 555 aa14.27□□□□□ -0.13
VTN-203ENST00000542029 TBC1D22AQ8WUA7 517 aa14.27□□□□□ -0.13
VTN-203ENST00000542029 SERPINA10Q9UK55 444 aa14.27□□□□□ -0.13
VTN-203ENST00000542029 FBXO3Q9UK99 471 aa14.27□□□□□ -0.13
VTN-203ENST00000542029 SCAF8Q9UPN6 1271 aaKnown RBP14.27□□□□□ -0.13
VTN-203ENST00000542029 KIF16BQ96L93 1317 aa14.26□□□□□ -0.13
VTN-203ENST00000542029 FRAT2O75474 233 aaPredicted RBP14.26□□□□□ -0.13
VTN-203ENST00000542029 TRPA1O75762 1119 aa14.26□□□□□ -0.13
VTN-203ENST00000542029 IFIT1P09914 478 aaKnown RBP14.26□□□□□ -0.13
VTN-203ENST00000542029 TTF2Q9UNY4 1162 aaKnown RBP14.26□□□□□ -0.13
VTN-203ENST00000542029 PAPPA2Q9BXP8 1791 aa14.25□□□□□ -0.13
VTN-203ENST00000542029 EYA2O00167 538 aa14.25□□□□□ -0.13
VTN-203ENST00000542029 UBTFL1P0CB47 393 aaPredicted RBP14.25□□□□□ -0.13
VTN-203ENST00000542029 HDLBPQ00341 1268 aaKnown RBP14.25□□□□□ -0.13
VTN-203ENST00000542029 SREBF2Q12772 1141 aa14.25□□□□□ -0.13
VTN-203ENST00000542029 PUM3Q15397 648 aaKnown RBP14.25□□□□□ -0.13
VTN-203ENST00000542029 MAP3K11Q16584 847 aa14.25□□□□□ -0.13
VTN-203ENST00000542029 LRRC24Q50LG9 513 aa14.25□□□□□ -0.13
VTN-203ENST00000542029 LDLRAD1Q5T700 205 aa14.25□□□□□ -0.13
VTN-203ENST00000542029 MOB2Q70IA6 237 aa14.25□□□□□ -0.13
VTN-203ENST00000542029 VGLL2Q8N8G2 317 aa14.25□□□□□ -0.13
VTN-203ENST00000542029 PRMT6Q96LA8 375 aaPredicted RBP14.25□□□□□ -0.13
VTN-203ENST00000542029 VEZTQ9HBM0 779 aa14.25□□□□□ -0.13
VTN-203ENST00000542029 JAG2Q9Y219 1238 aa14.25□□□□□ -0.13
VTN-203ENST00000542029 SUGT1Q9Y2Z0 365 aa14.25□□□□□ -0.13
VTN-203ENST00000542029 PSME4Q14997 1843 aa14.25□□□□□ -0.13
VTN-203ENST00000542029 PTPN12Q05209 780 aaKnown RBP14.24□□□□□ -0.13
VTN-203ENST00000542029 ARHGAP45Q92619 1136 aa14.24□□□□□ -0.13
VTN-203ENST00000542029 MRIQ9BWK5 157 aa14.24□□□□□ -0.13
VTN-203ENST00000542029 MCOLN1Q9GZU1 580 aa14.24□□□□□ -0.13
VTN-203ENST00000542029 NOB1Q9ULX3 412 aaKnown RBP14.24□□□□□ -0.13
VTN-203ENST00000542029 ANGEL1Q9UNK9 670 aaKnown RBP14.24□□□□□ -0.13
VTN-203ENST00000542029 CLRN2A0PK11 232 aa14.23□□□□□ -0.13
VTN-203ENST00000542029 SLC5A1P13866 664 aa14.23□□□□□ -0.13
VTN-203ENST00000542029 IREB2P48200 963 aaKnown RBP14.23□□□□□ -0.13
VTN-203ENST00000542029 TM4SF4P48230 202 aa14.23□□□□□ -0.13
VTN-203ENST00000542029 INHBEP58166 350 aa14.23□□□□□ -0.13
VTN-203ENST00000542029 DGKZQ13574 1117 aa14.23□□□□□ -0.13
VTN-203ENST00000542029 SPDYE2Q495Y8 402 aa14.23□□□□□ -0.13
VTN-203ENST00000542029 LPIN2Q92539 896 aa14.23□□□□□ -0.13
VTN-203ENST00000542029 SLC10A4Q96EP9 437 aa14.23□□□□□ -0.13
VTN-203ENST00000542029 MAST3O60307 1309 aa14.22□□□□□ -0.13
VTN-203ENST00000542029 IPO8O15397 1037 aaKnown RBP14.22□□□□□ -0.13
VTN-203ENST00000542029 CIAO1O76071 339 aa14.22□□□□□ -0.13
VTN-203ENST00000542029 ALDH1A1P00352 501 aa14.22□□□□□ -0.13
VTN-203ENST00000542029 FGFR2P21802 821 aa14.22□□□□□ -0.13
VTN-203ENST00000542029 RFX5P48382 616 aaPredicted RBP14.22□□□□□ -0.13
VTN-203ENST00000542029 TNNI2P48788 182 aa14.22□□□□□ -0.13
VTN-203ENST00000542029 RARSP54136 660 aaKnown RBP14.22□□□□□ -0.13
VTN-203ENST00000542029 PRKG1Q13976 671 aa14.22□□□□□ -0.13
VTN-203ENST00000542029 RASA3Q14644 834 aa14.22□□□□□ -0.13
VTN-203ENST00000542029 NOM1Q5C9Z4 860 aaKnown RBP14.22□□□□□ -0.13
VTN-203ENST00000542029 DZIP1LQ8IYY4 767 aaKnown RBP14.22□□□□□ -0.13
VTN-203ENST00000542029 ZNF70Q9UC06 446 aaPredicted RBP14.22□□□□□ -0.13
VTN-203ENST00000542029 POLR2AP24928 1970 aaKnown RBP14.22□□□□□ -0.13
VTN-203ENST00000542029 CCDC85CA6NKD9 419 aa14.21□□□□□ -0.13
VTN-203ENST00000542029 ZBTB48P10074 688 aaPredicted RBP14.21□□□□□ -0.13
VTN-203ENST00000542029 CRKP46108 304 aa14.21□□□□□ -0.13
VTN-203ENST00000542029 CHAF1AQ13111 956 aaPredicted RBP14.21□□□□□ -0.13
VTN-203ENST00000542029 SPRYD7Q5W111 196 aa14.21□□□□□ -0.13
VTN-203ENST00000542029 KLHDC4Q8TBB5 520 aa14.21□□□□□ -0.13
VTN-203ENST00000542029 WDR66Q8TBY9 1149 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms