RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 BCAMP50895 628 aa23.92■■□□□ 1.42
DDX55-207ENST00000540763 SMC1BQ8NDV3 1235 aa23.92■■□□□ 1.42
DDX55-207ENST00000540763 GPRC5DQ9NZD1 345 aa23.92■■□□□ 1.42
DDX55-207ENST00000540763 HACL1Q9UJ83 578 aa23.92■■□□□ 1.42
DDX55-207ENST00000540763 GTF2IP78347 998 aa23.91■■□□□ 1.42
DDX55-207ENST00000540763 PDS5AQ29RF7 1337 aaKnown RBP23.9■■□□□ 1.42
DDX55-207ENST00000540763 ADORA1P30542 326 aa23.9■■□□□ 1.42
DDX55-207ENST00000540763 CCDC102BQ68D86 513 aa23.9■■□□□ 1.42
DDX55-207ENST00000540763 NEUROD6Q96NK8 337 aa23.9■■□□□ 1.42
DDX55-207ENST00000540763 GMLQ99445 158 aa23.9■■□□□ 1.42
DDX55-207ENST00000540763 AKAP11Q9UKA4 1901 aa23.89■■□□□ 1.42
DDX55-207ENST00000540763 PHKA1P46020 1223 aa23.89■■□□□ 1.41
DDX55-207ENST00000540763 HTRA3P83110 453 aa23.89■■□□□ 1.41
DDX55-207ENST00000540763 CLASRPQ8N2M8 674 aaKnown RBP23.89■■□□□ 1.41
DDX55-207ENST00000540763 TBC1D22AQ8WUA7 517 aa23.89■■□□□ 1.41
DDX55-207ENST00000540763 KLRG1Q96E93 195 aa23.89■■□□□ 1.41
DDX55-207ENST00000540763 FRAT2O75474 233 aaPredicted RBP23.88■■□□□ 1.41
DDX55-207ENST00000540763 EAF2Q96CJ1 260 aaPredicted RBP23.88■■□□□ 1.41
DDX55-207ENST00000540763 LRRCC1Q9C099 1032 aa23.88■■□□□ 1.41
DDX55-207ENST00000540763 TAF1DQ9H5J8 278 aaPredicted RBP23.88■■□□□ 1.41
DDX55-207ENST00000540763 DENND2AQ9ULE3 1009 aa23.88■■□□□ 1.41
DDX55-207ENST00000540763 ZBTB12Q9Y330 459 aaPredicted RBP23.88■■□□□ 1.41
DDX55-207ENST00000540763 COL1A1P02452 1464 aaPredicted RBP23.87■■□□□ 1.41
DDX55-207ENST00000540763 ECM29Q5VYK3 1845 aa23.87■■□□□ 1.41
DDX55-207ENST00000540763 ARID4AP29374 1257 aaPredicted RBP23.87■■□□□ 1.41
DDX55-207ENST00000540763 EPHX2P34913 555 aa23.87■■□□□ 1.41
DDX55-207ENST00000540763 IRX6P78412 446 aaPredicted RBP23.87■■□□□ 1.41
DDX55-207ENST00000540763 GORABQ5T7V8 394 aa23.87■■□□□ 1.41
DDX55-207ENST00000540763 PNMA8AQ86V59 439 aaPredicted RBP23.87■■□□□ 1.41
DDX55-207ENST00000540763 FBXW7Q969H0 707 aa23.87■■□□□ 1.41
DDX55-207ENST00000540763 ADARB2Q9NS39 739 aaKnown RBP23.87■■□□□ 1.41
DDX55-207ENST00000540763 CNOT7Q9UIV1 285 aaKnown RBP23.87■■□□□ 1.41
DDX55-207ENST00000540763 UQCRFS1P1P0C7P4 283 aa23.86■■□□□ 1.41
DDX55-207ENST00000540763 MICALL2Q8IY33 904 aa23.86■■□□□ 1.41
DDX55-207ENST00000540763 GCC1Q96CN9 775 aa23.86■■□□□ 1.41
DDX55-207ENST00000540763 ZNF512BQ96KM6 892 aaPredicted RBP23.86■■□□□ 1.41
DDX55-207ENST00000540763 RWDD1Q9H446 243 aaPredicted RBP23.86■■□□□ 1.41
DDX55-207ENST00000540763 SALL1Q9NSC2 1324 aa23.85■■□□□ 1.41
DDX55-207ENST00000540763 H7C1D1 291 aa23.85■■□□□ 1.41
DDX55-207ENST00000540763 EPS15P42566 896 aa23.85■■□□□ 1.41
DDX55-207ENST00000540763 ZNF280AP59817 542 aaPredicted RBP23.85■■□□□ 1.41
DDX55-207ENST00000540763 CCDC158Q5M9N0 1113 aa23.85■■□□□ 1.41
DDX55-207ENST00000540763 USP50Q70EL3 339 aaPredicted RBP23.85■■□□□ 1.41
DDX55-207ENST00000540763 AACSQ86V21 672 aa23.85■■□□□ 1.41
DDX55-207ENST00000540763 WDR66Q8TBY9 1149 aa23.85■■□□□ 1.41
DDX55-207ENST00000540763 DBNDD2Q9BQY9 259 aa23.85■■□□□ 1.41
DDX55-207ENST00000540763 IL1RAPL2Q9NP60 686 aa23.85■■□□□ 1.41
DDX55-207ENST00000540763 DBNLQ9UJU6 430 aaKnown RBP23.85■■□□□ 1.41
DDX55-207ENST00000540763 IQSEC3Q9UPP2 1182 aaPredicted RBP23.85■■□□□ 1.41
DDX55-207ENST00000540763 SUGT1Q9Y2Z0 365 aa23.85■■□□□ 1.41
DDX55-207ENST00000540763 USP17L8P0C7I0 530 aa23.84■■□□□ 1.41
DDX55-207ENST00000540763 MFSD14BQ5SR56 506 aa23.84■■□□□ 1.41
DDX55-207ENST00000540763 CERS5Q8N5B7 392 aa23.84■■□□□ 1.41
DDX55-207ENST00000540763 APBB1O00213 710 aa23.83■■□□□ 1.41
DDX55-207ENST00000540763 RASGRF1Q13972 1273 aa23.83■■□□□ 1.41
DDX55-207ENST00000540763 OGFOD1Q8N543 542 aa23.83■■□□□ 1.41
DDX55-207ENST00000540763 JMYQ8N9B5 988 aa23.83■■□□□ 1.41
DDX55-207ENST00000540763 CHAF1AQ13111 956 aaPredicted RBP23.82■■□□□ 1.4
DDX55-207ENST00000540763 MXD3Q9BW11 206 aa23.82■■□□□ 1.4
DDX55-207ENST00000540763 CCDC8Q9H0W5 538 aaPredicted RBP23.82■■□□□ 1.4
DDX55-207ENST00000540763 TLR7Q9NYK1 1049 aaKnown RBP23.82■■□□□ 1.4
DDX55-207ENST00000540763 HDAC9Q9UKV0 1011 aa23.82■■□□□ 1.4
DDX55-207ENST00000540763 MAST2Q6P0Q8 1798 aa23.82■■□□□ 1.4
DDX55-207ENST00000540763 IFIT2P09913 472 aaKnown RBP23.81■■□□□ 1.4
DDX55-207ENST00000540763 TTC39AQ5SRH9 613 aa23.81■■□□□ 1.4
DDX55-207ENST00000540763 ZGPATQ8N5A5 531 aaKnown RBP23.81■■□□□ 1.4
DDX55-207ENST00000540763 DOCK2Q92608 1830 aa23.8■■□□□ 1.4
DDX55-207ENST00000540763 LDHDQ86WU2 507 aa23.8■■□□□ 1.4
DDX55-207ENST00000540763 KIAA0825Q8IV33 1275 aa23.8■■□□□ 1.4
DDX55-207ENST00000540763 SMC5Q8IY18 1101 aa23.8■■□□□ 1.4
DDX55-207ENST00000540763 JAG2Q9Y219 1238 aa23.8■■□□□ 1.4
DDX55-207ENST00000540763 MAST3O60307 1309 aa23.8■■□□□ 1.4
DDX55-207ENST00000540763 SHTN1A0MZ66 631 aa23.79■■□□□ 1.4
DDX55-207ENST00000540763 SPATA5Q8NB90 893 aa23.79■■□□□ 1.4
DDX55-207ENST00000540763 IGSF3O75054 1194 aa23.78■■□□□ 1.4
DDX55-207ENST00000540763 MCAMP43121 646 aa23.78■■□□□ 1.4
DDX55-207ENST00000540763 KIF4BQ2VIQ3 1234 aa23.78■■□□□ 1.4
DDX55-207ENST00000540763 ZC3H15Q8WU90 426 aaKnown RBP23.78■■□□□ 1.4
DDX55-207ENST00000540763 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.78■■□□□ 1.4
DDX55-207ENST00000540763 MYOZ2Q9NPC6 264 aa23.78■■□□□ 1.4
DDX55-207ENST00000540763 HMG20BQ9P0W2 317 aa23.78■■□□□ 1.4
DDX55-207ENST00000540763 MYH2Q9UKX2 1941 aa23.77■■□□□ 1.4
DDX55-207ENST00000540763 HDLBPQ00341 1268 aaKnown RBP23.77■■□□□ 1.4
DDX55-207ENST00000540763 MTMR14Q8NCE2 650 aa23.77■■□□□ 1.4
DDX55-207ENST00000540763 TRPM4Q8TD43 1214 aa23.77■■□□□ 1.4
DDX55-207ENST00000540763 MRIQ9BWK5 157 aa23.77■■□□□ 1.4
DDX55-207ENST00000540763 MYO5AQ9Y4I1 1855 aaKnown RBP23.77■■□□□ 1.4
DDX55-207ENST00000540763 NEFLP07196 543 aa23.76■■□□□ 1.39
DDX55-207ENST00000540763 EAPPQ56P03 285 aaPredicted RBP23.76■■□□□ 1.39
DDX55-207ENST00000540763 SAMD7Q7Z3H4 446 aa23.76■■□□□ 1.39
DDX55-207ENST00000540763 PGAP2Q9UHJ9 254 aa23.76■■□□□ 1.39
DDX55-207ENST00000540763 SERPINA10Q9UK55 444 aa23.76■■□□□ 1.39
DDX55-207ENST00000540763 POLR2AP24928 1970 aaKnown RBP23.75■■□□□ 1.39
DDX55-207ENST00000540763 SMARCA5O60264 1052 aaPredicted RBP23.75■■□□□ 1.39
DDX55-207ENST00000540763 IGHDP01880 384 aa23.75■■□□□ 1.39
DDX55-207ENST00000540763 SCARF1Q14162 830 aa23.75■■□□□ 1.39
DDX55-207ENST00000540763 TBC1D10BQ4KMP7 808 aaPredicted RBP23.75■■□□□ 1.39
DDX55-207ENST00000540763 SPTY2D1Q68D10 685 aaPredicted RBP23.75■■□□□ 1.39
DDX55-207ENST00000540763 ZBTB47Q9UFB7 747 aaPredicted RBP23.75■■□□□ 1.39
DDX55-207ENST00000540763 TTF2Q9UNY4 1162 aaKnown RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms