RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 SREBF2Q12772 1141 aa19.25■□□□□ 0.67
UBE3B-211ENST00000539843 UBE4AQ14139 1066 aa19.25■□□□□ 0.67
UBE3B-211ENST00000539843 EPHA10Q5JZY3 1008 aa19.25■□□□□ 0.67
UBE3B-211ENST00000539843 PRAMEF18Q5VWM3 479 aa19.25■□□□□ 0.67
UBE3B-211ENST00000539843 PPP1R12BO60237 982 aaPredicted RBP19.24■□□□□ 0.67
UBE3B-211ENST00000539843 MTMR14Q8NCE2 650 aa19.24■□□□□ 0.67
UBE3B-211ENST00000539843 ZNF521Q96K83 1311 aa19.24■□□□□ 0.67
UBE3B-211ENST00000539843 SNAP23O00161 211 aa19.23■□□□□ 0.67
UBE3B-211ENST00000539843 HIBADHP31937 336 aaKnown RBP19.23■□□□□ 0.67
UBE3B-211ENST00000539843 TNFAIP1Q13829 316 aa19.23■□□□□ 0.67
UBE3B-211ENST00000539843 SUPT20HL1Q3ZLR7 823 aa19.23■□□□□ 0.67
UBE3B-211ENST00000539843 CFAP100Q494V2 611 aa19.23■□□□□ 0.67
UBE3B-211ENST00000539843 SUCLG2Q96I99 432 aa19.23■□□□□ 0.67
UBE3B-211ENST00000539843 DEFB129Q9H1M3 183 aa19.23■□□□□ 0.67
UBE3B-211ENST00000539843 VEZTQ9HBM0 779 aa19.23■□□□□ 0.67
UBE3B-211ENST00000539843 FRAT2O75474 233 aaPredicted RBP19.22■□□□□ 0.67
UBE3B-211ENST00000539843 PRKG1Q13976 671 aa19.22■□□□□ 0.67
UBE3B-211ENST00000539843 CAVIN4Q5BKX8 364 aa19.22■□□□□ 0.67
UBE3B-211ENST00000539843 MOB2Q70IA6 237 aa19.22■□□□□ 0.67
UBE3B-211ENST00000539843 MRPL50Q8N5N7 158 aaKnown RBP19.22■□□□□ 0.67
UBE3B-211ENST00000539843 ZBED3Q96IU2 234 aaPredicted RBP19.22■□□□□ 0.67
UBE3B-211ENST00000539843 ANGEL1Q9UNK9 670 aaKnown RBP19.22■□□□□ 0.67
UBE3B-211ENST00000539843 UTYO14607 1347 aa19.22■□□□□ 0.67
UBE3B-211ENST00000539843 IRS2Q9Y4H2 1338 aa19.22■□□□□ 0.67
UBE3B-211ENST00000539843 SPDYE2BA6NHP3 402 aa19.21■□□□□ 0.67
UBE3B-211ENST00000539843 NBPF7P0C2Y1 421 aaPredicted RBP19.21■□□□□ 0.67
UBE3B-211ENST00000539843 SPDYE6P0CI01 402 aa19.21■□□□□ 0.67
UBE3B-211ENST00000539843 METTL24Q5JXM2 366 aa19.21■□□□□ 0.67
UBE3B-211ENST00000539843 MFSD14BQ5SR56 506 aa19.21■□□□□ 0.67
UBE3B-211ENST00000539843 CERS5Q8N5B7 392 aa19.21■□□□□ 0.67
UBE3B-211ENST00000539843 BICC1Q9H694 974 aaKnown RBP19.21■□□□□ 0.67
UBE3B-211ENST00000539843 MLLT1Q03111 559 aaPredicted RBP19.2■□□□□ 0.66
UBE3B-211ENST00000539843 JAG2Q9Y219 1238 aa19.2■□□□□ 0.66
UBE3B-211ENST00000539843 FAM205AQ6ZU69 1335 aa19.2■□□□□ 0.66
UBE3B-211ENST00000539843 AKAP11Q9UKA4 1901 aa19.19■□□□□ 0.66
UBE3B-211ENST00000539843 ALDH1L2Q3SY69 923 aa19.19■□□□□ 0.66
UBE3B-211ENST00000539843 RABL6Q3YEC7 729 aaPredicted RBP19.19■□□□□ 0.66
UBE3B-211ENST00000539843 CTU1Q7Z7A3 348 aaKnown RBP19.19■□□□□ 0.66
UBE3B-211ENST00000539843 TBC1D22AQ8WUA7 517 aa19.19■□□□□ 0.66
UBE3B-211ENST00000539843 TTF2Q9UNY4 1162 aaKnown RBP19.19■□□□□ 0.66
UBE3B-211ENST00000539843 HDAC5Q9UQL6 1122 aa19.19■□□□□ 0.66
UBE3B-211ENST00000539843 CASP8AP2Q9UKL3 1982 aa19.19■□□□□ 0.66
UBE3B-211ENST00000539843 CLRN2A0PK11 232 aa19.18■□□□□ 0.66
UBE3B-211ENST00000539843 UNCXA6NJT0 531 aa19.18■□□□□ 0.66
UBE3B-211ENST00000539843 ALDH1A1P00352 501 aa19.18■□□□□ 0.66
UBE3B-211ENST00000539843 GYG1P46976 350 aa19.18■□□□□ 0.66
UBE3B-211ENST00000539843 IREB2P48200 963 aaKnown RBP19.18■□□□□ 0.66
UBE3B-211ENST00000539843 PTPN12Q05209 780 aaKnown RBP19.18■□□□□ 0.66
UBE3B-211ENST00000539843 MKRN3Q13064 507 aaKnown RBP19.18■□□□□ 0.66
UBE3B-211ENST00000539843 TDRD7Q8NHU6 1098 aaKnown RBP19.18■□□□□ 0.66
UBE3B-211ENST00000539843 SSH1Q8WYL5 1049 aa19.18■□□□□ 0.66
UBE3B-211ENST00000539843 SLC10A4Q96EP9 437 aa19.18■□□□□ 0.66
UBE3B-211ENST00000539843 SMC4Q9NTJ3 1288 aa19.18■□□□□ 0.66
UBE3B-211ENST00000539843 SERPINA10Q9UK55 444 aa19.18■□□□□ 0.66
UBE3B-211ENST00000539843 ZNF646O15015 1829 aaPredicted RBP19.18■□□□□ 0.66
UBE3B-211ENST00000539843 TM4SF4P48230 202 aa19.17■□□□□ 0.66
UBE3B-211ENST00000539843 TNNI2P48788 182 aa19.17■□□□□ 0.66
UBE3B-211ENST00000539843 INHBEP58166 350 aa19.17■□□□□ 0.66
UBE3B-211ENST00000539843 SLFN5Q08AF3 891 aa19.17■□□□□ 0.66
UBE3B-211ENST00000539843 PUS3Q9BZE2 481 aaKnown RBP19.17■□□□□ 0.66
UBE3B-211ENST00000539843 RIPOR2Q9Y4F9 1068 aa19.17■□□□□ 0.66
UBE3B-211ENST00000539843 MANSC4A6NHS7 340 aaPredicted RBP19.16■□□□□ 0.66
UBE3B-211ENST00000539843 IFIT1P09914 478 aaKnown RBP19.16■□□□□ 0.66
UBE3B-211ENST00000539843 CT47B1P0C2W7 299 aaPredicted RBP19.16■□□□□ 0.66
UBE3B-211ENST00000539843 PKN2Q16513 984 aaKnown RBP19.16■□□□□ 0.66
UBE3B-211ENST00000539843 KAZALD1Q96I82 304 aa19.16■□□□□ 0.66
UBE3B-211ENST00000539843 FAM84BQ96KN1 310 aaPredicted RBP19.16■□□□□ 0.66
UBE3B-211ENST00000539843 PRMT6Q96LA8 375 aaPredicted RBP19.16■□□□□ 0.66
UBE3B-211ENST00000539843 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.16■□□□□ 0.66
UBE3B-211ENST00000539843 A0A1B0GUL6 1792 aa19.16■□□□□ 0.66
UBE3B-211ENST00000539843 PDE8BO95263 885 aa19.15■□□□□ 0.66
UBE3B-211ENST00000539843 ZBTB48P10074 688 aaPredicted RBP19.15■□□□□ 0.66
UBE3B-211ENST00000539843 MAP3K11Q16584 847 aa19.15■□□□□ 0.66
UBE3B-211ENST00000539843 LDLRAD1Q5T700 205 aa19.15■□□□□ 0.66
UBE3B-211ENST00000539843 SPRYD7Q5W111 196 aa19.15■□□□□ 0.66
UBE3B-211ENST00000539843 TBC1D8O95759 1140 aa19.14■□□□□ 0.65
UBE3B-211ENST00000539843 CHAF1AQ13111 956 aaPredicted RBP19.14■□□□□ 0.65
UBE3B-211ENST00000539843 RASA3Q14644 834 aa19.14■□□□□ 0.65
UBE3B-211ENST00000539843 PUM3Q15397 648 aaKnown RBP19.14■□□□□ 0.65
UBE3B-211ENST00000539843 NOM1Q5C9Z4 860 aaKnown RBP19.14■□□□□ 0.65
UBE3B-211ENST00000539843 OTUD7BQ6GQQ9 843 aa19.14■□□□□ 0.65
UBE3B-211ENST00000539843 ANKRD44Q8N8A2 993 aa19.14■□□□□ 0.65
UBE3B-211ENST00000539843 TMOD2Q9NZR1 351 aa19.14■□□□□ 0.65
UBE3B-211ENST00000539843 MAST3O60307 1309 aa19.14■□□□□ 0.65
UBE3B-211ENST00000539843 SPDYE2Q495Y8 402 aa19.13■□□□□ 0.65
UBE3B-211ENST00000539843 LRRC24Q50LG9 513 aa19.13■□□□□ 0.65
UBE3B-211ENST00000539843 ANKRD13AQ8IZ07 590 aa19.13■□□□□ 0.65
UBE3B-211ENST00000539843 KIF16BQ96L93 1317 aa19.12■□□□□ 0.65
UBE3B-211ENST00000539843 GPR25O00155 361 aa19.12■□□□□ 0.65
UBE3B-211ENST00000539843 UBTFL1P0CB47 393 aaPredicted RBP19.12■□□□□ 0.65
UBE3B-211ENST00000539843 SLC5A1P13866 664 aa19.12■□□□□ 0.65
UBE3B-211ENST00000539843 CRKP46108 304 aa19.12■□□□□ 0.65
UBE3B-211ENST00000539843 RGS19P49795 217 aa19.12■□□□□ 0.65
UBE3B-211ENST00000539843 HDLBPQ00341 1268 aaKnown RBP19.12■□□□□ 0.65
UBE3B-211ENST00000539843 FBXO33Q7Z6M2 555 aa19.12■□□□□ 0.65
UBE3B-211ENST00000539843 DZIP1LQ8IYY4 767 aaKnown RBP19.12■□□□□ 0.65
UBE3B-211ENST00000539843 ZNF296Q8WUU4 475 aaPredicted RBP19.12■□□□□ 0.65
UBE3B-211ENST00000539843 TEKT1Q969V4 418 aa19.12■□□□□ 0.65
UBE3B-211ENST00000539843 API5Q9BZZ5 524 aaKnown RBP19.12■□□□□ 0.65
UBE3B-211ENST00000539843 USP44Q9H0E7 712 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms