RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 IQSEC3Q9UPP2 1182 aaPredicted RBP20.36■□□□□ 0.85
PCDHB17P-201ENST00000539533 MYO5AQ9Y4I1 1855 aaKnown RBP20.36■□□□□ 0.85
PCDHB17P-201ENST00000539533 PPP1R9BQ96SB3 815 aa20.35■□□□□ 0.85
PCDHB17P-201ENST00000539533 PUS7LQ9H0K6 701 aaKnown RBP20.35■□□□□ 0.85
PCDHB17P-201ENST00000539533 SLC9C2Q5TAH2 1124 aa20.35■□□□□ 0.85
PCDHB17P-201ENST00000539533 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.35■□□□□ 0.85
PCDHB17P-201ENST00000539533 EN1Q05925 392 aaPredicted RBP20.34■□□□□ 0.85
PCDHB17P-201ENST00000539533 GRAPQ13588 217 aa20.34■□□□□ 0.85
PCDHB17P-201ENST00000539533 COL9A3Q14050 684 aaPredicted RBP20.34■□□□□ 0.85
PCDHB17P-201ENST00000539533 RNF20Q5VTR2 975 aa20.34■□□□□ 0.85
PCDHB17P-201ENST00000539533 GRAPLQ8TC17 118 aaPredicted RBP20.34■□□□□ 0.85
PCDHB17P-201ENST00000539533 TMX3Q96JJ7 454 aa20.34■□□□□ 0.85
PCDHB17P-201ENST00000539533 HSPD1P10809 573 aaKnown RBP20.34■□□□□ 0.85
PCDHB17P-201ENST00000539533 KLRK1P26718 216 aa20.34■□□□□ 0.85
PCDHB17P-201ENST00000539533 EZH2Q15910 746 aaKnown RBP20.34■□□□□ 0.85
PCDHB17P-201ENST00000539533 APPBP2Q92624 585 aa20.34■□□□□ 0.85
PCDHB17P-201ENST00000539533 TTC14Q96N46 770 aa20.34■□□□□ 0.85
PCDHB17P-201ENST00000539533 ADD2P35612 726 aa20.33■□□□□ 0.85
PCDHB17P-201ENST00000539533 MCM2P49736 904 aa20.33■□□□□ 0.85
PCDHB17P-201ENST00000539533 MCTP1Q6DN14 999 aa20.33■□□□□ 0.85
PCDHB17P-201ENST00000539533 NLGN1Q8N2Q7 840 aa20.33■□□□□ 0.85
PCDHB17P-201ENST00000539533 RPGRQ92834 1020 aaKnown RBP20.33■□□□□ 0.85
PCDHB17P-201ENST00000539533 WWC3Q9ULE0 1092 aa20.33■□□□□ 0.85
PCDHB17P-201ENST00000539533 U3KPZ7 1027 aaPredicted RBP20.33■□□□□ 0.85
PCDHB17P-201ENST00000539533 PNPLA7Q6ZV29 1317 aa20.33■□□□□ 0.84
PCDHB17P-201ENST00000539533 CRY2Q49AN0 593 aa20.32■□□□□ 0.84
PCDHB17P-201ENST00000539533 FAM84BQ96KN1 310 aaPredicted RBP20.32■□□□□ 0.84
PCDHB17P-201ENST00000539533 TM6SF1Q9BZW5 370 aa20.32■□□□□ 0.84
PCDHB17P-201ENST00000539533 ANKRD2Q9GZV1 360 aa20.32■□□□□ 0.84
PCDHB17P-201ENST00000539533 ZSWIM6Q9HCJ5 1215 aa20.32■□□□□ 0.84
PCDHB17P-201ENST00000539533 MYH7P12883 1935 aa20.32■□□□□ 0.84
PCDHB17P-201ENST00000539533 DSCC1Q9BVC3 393 aa20.32■□□□□ 0.84
PCDHB17P-201ENST00000539533 ZNF804BA4D1E1 1349 aa20.32■□□□□ 0.84
PCDHB17P-201ENST00000539533 CYP21A2P08686 494 aa20.31■□□□□ 0.84
PCDHB17P-201ENST00000539533 ZSCAN25Q6NSZ9 544 aa20.31■□□□□ 0.84
PCDHB17P-201ENST00000539533 FLAD1Q8NFF5 587 aa20.31■□□□□ 0.84
PCDHB17P-201ENST00000539533 ANP32BQ92688 251 aaKnown RBP20.31■□□□□ 0.84
PCDHB17P-201ENST00000539533 LARP6Q9BRS8 491 aaKnown RBP20.31■□□□□ 0.84
PCDHB17P-201ENST00000539533 AK2P54819 239 aa20.31■□□□□ 0.84
PCDHB17P-201ENST00000539533 ZNF445P59923 1031 aa20.31■□□□□ 0.84
PCDHB17P-201ENST00000539533 CAVIN4Q5BKX8 364 aa20.31■□□□□ 0.84
PCDHB17P-201ENST00000539533 CAMKK2Q96RR4 588 aa20.31■□□□□ 0.84
PCDHB17P-201ENST00000539533 CYP46A1Q9Y6A2 500 aa20.31■□□□□ 0.84
PCDHB17P-201ENST00000539533 ZNF532Q9HCE3 1301 aa20.31■□□□□ 0.84
PCDHB17P-201ENST00000539533 PDE6AP16499 860 aa20.3■□□□□ 0.84
PCDHB17P-201ENST00000539533 TSGA10IPQ3SY00 556 aa20.3■□□□□ 0.84
PCDHB17P-201ENST00000539533 RUFY3Q7L099 469 aa20.3■□□□□ 0.84
PCDHB17P-201ENST00000539533 VPS37DQ86XT2 251 aa20.3■□□□□ 0.84
PCDHB17P-201ENST00000539533 ZGPATQ8N5A5 531 aaKnown RBP20.3■□□□□ 0.84
PCDHB17P-201ENST00000539533 CWC22Q9HCG8 908 aaKnown RBP20.3■□□□□ 0.84
PCDHB17P-201ENST00000539533 LMBRD1Q9NUN5 540 aa20.3■□□□□ 0.84
PCDHB17P-201ENST00000539533 RPAP1Q9BWH6 1393 aaPredicted RBP20.3■□□□□ 0.84
PCDHB17P-201ENST00000539533 A0A0G2JLW4 131 aa20.3■□□□□ 0.84
PCDHB17P-201ENST00000539533 TPM2P07951 284 aa20.3■□□□□ 0.84
PCDHB17P-201ENST00000539533 PKP1Q13835 747 aa20.3■□□□□ 0.84
PCDHB17P-201ENST00000539533 FOXP2O15409 715 aa20.29■□□□□ 0.84
PCDHB17P-201ENST00000539533 GPAA1O43292 621 aa20.29■□□□□ 0.84
PCDHB17P-201ENST00000539533 UBE3CQ15386 1083 aa20.29■□□□□ 0.84
PCDHB17P-201ENST00000539533 MSL1Q68DK7 614 aa20.29■□□□□ 0.84
PCDHB17P-201ENST00000539533 PDRG1Q9NUG6 133 aa20.29■□□□□ 0.84
PCDHB17P-201ENST00000539533 GNL3LQ9NVN8 582 aaKnown RBP20.29■□□□□ 0.84
PCDHB17P-201ENST00000539533 TCRBV5S4A2TA0A5A2 114 aa20.29■□□□□ 0.84
PCDHB17P-201ENST00000539533 FBXO33Q7Z6M2 555 aa20.29■□□□□ 0.84
PCDHB17P-201ENST00000539533 TXNRD3Q86VQ6 643 aa20.29■□□□□ 0.84
PCDHB17P-201ENST00000539533 ANKIB1Q9P2G1 1089 aa20.29■□□□□ 0.84
PCDHB17P-201ENST00000539533 PSMA5P28066 241 aa20.28■□□□□ 0.84
PCDHB17P-201ENST00000539533 MAP3K12Q12852 859 aa20.28■□□□□ 0.84
PCDHB17P-201ENST00000539533 CAVIN1Q6NZI2 390 aaKnown RBP20.28■□□□□ 0.84
PCDHB17P-201ENST00000539533 MAGEB6Q8N7X4 407 aa20.28■□□□□ 0.84
PCDHB17P-201ENST00000539533 RBM17Q96I25 401 aaKnown RBP20.28■□□□□ 0.84
PCDHB17P-201ENST00000539533 RGPD3A6NKT7 1758 aaPredicted RBP20.28■□□□□ 0.84
PCDHB17P-201ENST00000539533 RGPD4Q7Z3J3 1758 aa20.28■□□□□ 0.84
PCDHB17P-201ENST00000539533 MMP10P09238 476 aa20.28■□□□□ 0.84
PCDHB17P-201ENST00000539533 NCLP19338 710 aaKnown RBP20.28■□□□□ 0.84
PCDHB17P-201ENST00000539533 ZSCAN23Q3MJ62 389 aa20.28■□□□□ 0.84
PCDHB17P-201ENST00000539533 TTLL5Q6EMB2 1281 aa20.28■□□□□ 0.84
PCDHB17P-201ENST00000539533 COL1A1P02452 1464 aaPredicted RBP20.27■□□□□ 0.84
PCDHB17P-201ENST00000539533 KLRG2A4D1S0 409 aaPredicted RBP20.27■□□□□ 0.84
PCDHB17P-201ENST00000539533 ZSCAN30Q86W11 494 aa20.27■□□□□ 0.84
PCDHB17P-201ENST00000539533 TCEANC2Q96MN5 208 aa20.27■□□□□ 0.84
PCDHB17P-201ENST00000539533 CUL4AQ13619 759 aa20.27■□□□□ 0.83
PCDHB17P-201ENST00000539533 BLOC1S2Q6QNY1 142 aa20.27■□□□□ 0.83
PCDHB17P-201ENST00000539533 HIBADHP31937 336 aaKnown RBP20.26■□□□□ 0.83
PCDHB17P-201ENST00000539533 SLC15A2Q16348 729 aa20.26■□□□□ 0.83
PCDHB17P-201ENST00000539533 DOCK2Q92608 1830 aa20.26■□□□□ 0.83
PCDHB17P-201ENST00000539533 LRP2BPQ9P2M1 347 aa20.26■□□□□ 0.83
PCDHB17P-201ENST00000539533 ABCF2Q9UG63 623 aa20.26■□□□□ 0.83
PCDHB17P-201ENST00000539533 HOXA10P31260 410 aaPredicted RBP20.26■□□□□ 0.83
PCDHB17P-201ENST00000539533 STOX1Q6ZVD7 989 aa20.26■□□□□ 0.83
PCDHB17P-201ENST00000539533 LIMCH1Q9UPQ0 1083 aa20.26■□□□□ 0.83
PCDHB17P-201ENST00000539533 FGAP02671 866 aa20.25■□□□□ 0.83
PCDHB17P-201ENST00000539533 RPS6KB1P23443 525 aa20.25■□□□□ 0.83
PCDHB17P-201ENST00000539533 KRT32Q14532 448 aa20.25■□□□□ 0.83
PCDHB17P-201ENST00000539533 NEK1Q96PY6 1258 aa20.25■□□□□ 0.83
PCDHB17P-201ENST00000539533 BRIP1Q9BX63 1249 aa20.25■□□□□ 0.83
PCDHB17P-201ENST00000539533 IRS2Q9Y4H2 1338 aa20.24■□□□□ 0.83
PCDHB17P-201ENST00000539533 GPSM2P81274 684 aa20.24■□□□□ 0.83
PCDHB17P-201ENST00000539533 DENND2AQ9ULE3 1009 aa20.24■□□□□ 0.83
PCDHB17P-201ENST00000539533 PARP3Q9Y6F1 533 aa20.24■□□□□ 0.83
PCDHB17P-201ENST00000539533 XDHP47989 1333 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms