RNA–Protein interactions for RNA: ENST00000539469.6

PDZRN4-203, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best) BASIC

Gene PDZRN4, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-203ENST00000539469 SSFA2P28290 1259 aa7.38□□□□□ -1.23
PDZRN4-203ENST00000539469 CLEC4GQ6UXB4 293 aa7.38□□□□□ -1.23
PDZRN4-203ENST00000539469 C16orf71Q8IYS4 520 aaPredicted RBP7.38□□□□□ -1.23
PDZRN4-203ENST00000539469 RBM46Q8TBY0 533 aaKnown RBP7.38□□□□□ -1.23
PDZRN4-203ENST00000539469 CCDC85AQ96PX6 553 aaPredicted RBP7.38□□□□□ -1.23
PDZRN4-203ENST00000539469 PNPLA7Q6ZV29 1317 aa7.38□□□□□ -1.23
PDZRN4-203ENST00000539469 COL11A2P13942 1736 aaPredicted RBP7.38□□□□□ -1.23
PDZRN4-203ENST00000539469 ZPR1O75312 459 aa7.38□□□□□ -1.23
PDZRN4-203ENST00000539469 GYS1P13807 737 aa7.38□□□□□ -1.23
PDZRN4-203ENST00000539469 RFC4P35249 363 aa7.38□□□□□ -1.23
PDZRN4-203ENST00000539469 MARSP56192 900 aaKnown RBP7.38□□□□□ -1.23
PDZRN4-203ENST00000539469 C3orf67Q6ZVT6 689 aa7.38□□□□□ -1.23
PDZRN4-203ENST00000539469 GRPEL1Q9HAV7 217 aa7.38□□□□□ -1.23
PDZRN4-203ENST00000539469 ZNF652Q9Y2D9 606 aa7.38□□□□□ -1.23
PDZRN4-203ENST00000539469 AK9Q5TCS8 1911 aa7.37□□□□□ -1.23
PDZRN4-203ENST00000539469 IRS4O14654 1257 aaPredicted RBP7.37□□□□□ -1.23
PDZRN4-203ENST00000539469 AP1G2O75843 785 aa7.37□□□□□ -1.23
PDZRN4-203ENST00000539469 HCLS1P14317 486 aaPredicted RBP7.37□□□□□ -1.23
PDZRN4-203ENST00000539469 ERCC5P28715 1186 aaPredicted RBP7.37□□□□□ -1.23
PDZRN4-203ENST00000539469 PTPN12Q05209 780 aaKnown RBP7.37□□□□□ -1.23
PDZRN4-203ENST00000539469 DSG2Q14126 1118 aa7.37□□□□□ -1.23
PDZRN4-203ENST00000539469 COL23A1Q86Y22 540 aaPredicted RBP7.37□□□□□ -1.23
PDZRN4-203ENST00000539469 DHX38Q92620 1227 aaKnown RBP7.37□□□□□ -1.23
PDZRN4-203ENST00000539469 PLA2G12BQ9BX93 195 aa7.37□□□□□ -1.23
PDZRN4-203ENST00000539469 FAM13BQ9NYF5 915 aa7.37□□□□□ -1.23
PDZRN4-203ENST00000539469 CACNA1SQ13698 1873 aa7.37□□□□□ -1.23
PDZRN4-203ENST00000539469 ARAP2Q8WZ64 1704 aa7.37□□□□□ -1.23
PDZRN4-203ENST00000539469 SURF6O75683 361 aaKnown RBP7.37□□□□□ -1.23
PDZRN4-203ENST00000539469 ERFEQ4G0M1 354 aa7.37□□□□□ -1.23
PDZRN4-203ENST00000539469 KIAA1211Q6ZU35 1233 aa7.37□□□□□ -1.23
PDZRN4-203ENST00000539469 CCDC24Q8N4L8 307 aa7.37□□□□□ -1.23
PDZRN4-203ENST00000539469 BANK1Q8NDB2 785 aa7.37□□□□□ -1.23
PDZRN4-203ENST00000539469 ZNF594Q96JF6 807 aaPredicted RBP7.37□□□□□ -1.23
PDZRN4-203ENST00000539469 UTP14AQ9BVJ6 771 aaKnown RBP7.37□□□□□ -1.23
PDZRN4-203ENST00000539469 SIL1Q9H173 461 aa7.37□□□□□ -1.23
PDZRN4-203ENST00000539469 IQSEC3Q9UPP2 1182 aaPredicted RBP7.37□□□□□ -1.23
PDZRN4-203ENST00000539469 NFIXQ14938 502 aa7.36□□□□□ -1.23
PDZRN4-203ENST00000539469 FOXD4L6Q3SYB3 417 aaPredicted RBP7.36□□□□□ -1.23
PDZRN4-203ENST00000539469 PARP10Q53GL7 1025 aa7.36□□□□□ -1.23
PDZRN4-203ENST00000539469 FOXD4L3Q6VB84 417 aaPredicted RBP7.36□□□□□ -1.23
PDZRN4-203ENST00000539469 GREM2Q9H772 168 aa7.36□□□□□ -1.23
PDZRN4-203ENST00000539469 TFCP2L1Q9NZI6 479 aa7.36□□□□□ -1.23
PDZRN4-203ENST00000539469 CHMP3Q9Y3E7 222 aa7.36□□□□□ -1.23
PDZRN4-203ENST00000539469 SH3TC1Q8TE82 1336 aa7.36□□□□□ -1.23
PDZRN4-203ENST00000539469 SALL3Q9BXA9 1300 aa7.36□□□□□ -1.23
PDZRN4-203ENST00000539469 CARMIL3Q8ND23 1372 aa7.36□□□□□ -1.23
PDZRN4-203ENST00000539469 FSD2A1L4K1 749 aa7.36□□□□□ -1.23
PDZRN4-203ENST00000539469 SASH1O94885 1247 aa7.36□□□□□ -1.23
PDZRN4-203ENST00000539469 CSF1RP07333 972 aa7.36□□□□□ -1.23
PDZRN4-203ENST00000539469 CTSWP56202 376 aa7.36□□□□□ -1.23
PDZRN4-203ENST00000539469 TMEM164Q5U3C3 297 aa7.36□□□□□ -1.23
PDZRN4-203ENST00000539469 TTLL11Q8NHH1 800 aa7.36□□□□□ -1.23
PDZRN4-203ENST00000539469 IL1RAPL2Q9NP60 686 aa7.36□□□□□ -1.23
PDZRN4-203ENST00000539469 RIC1Q4ADV7 1423 aa7.36□□□□□ -1.23
PDZRN4-203ENST00000539469 PTGDRQ13258 359 aa7.35□□□□□ -1.23
PDZRN4-203ENST00000539469 GAS2L3Q86XJ1 694 aa7.35□□□□□ -1.23
PDZRN4-203ENST00000539469 PDGFDQ9GZP0 370 aaPredicted RBP7.35□□□□□ -1.23
PDZRN4-203ENST00000539469 SPDYE16A6NNV3 312 aaPredicted RBP7.35□□□□□ -1.23
PDZRN4-203ENST00000539469 PDE8AO60658 829 aa7.35□□□□□ -1.23
PDZRN4-203ENST00000539469 MRE11P49959 708 aa7.35□□□□□ -1.23
PDZRN4-203ENST00000539469 DDR1Q08345 913 aa7.35□□□□□ -1.23
PDZRN4-203ENST00000539469 QPCTQ16769 361 aa7.35□□□□□ -1.23
PDZRN4-203ENST00000539469 GORABQ5T7V8 394 aa7.35□□□□□ -1.23
PDZRN4-203ENST00000539469 TSHZ3Q63HK5 1081 aa7.35□□□□□ -1.23
PDZRN4-203ENST00000539469 RHPN1Q8TCX5 695 aa7.35□□□□□ -1.23
PDZRN4-203ENST00000539469 TMUB1Q9BVT8 246 aa7.35□□□□□ -1.23
PDZRN4-203ENST00000539469 PUS3Q9BZE2 481 aaKnown RBP7.35□□□□□ -1.23
PDZRN4-203ENST00000539469 LRRCC1Q9C099 1032 aa7.35□□□□□ -1.23
PDZRN4-203ENST00000539469 COPRSQ9NQ92 184 aa7.35□□□□□ -1.23
PDZRN4-203ENST00000539469 HDAC5Q9UQL6 1122 aa7.35□□□□□ -1.23
PDZRN4-203ENST00000539469 BAG6P46379 1132 aa7.35□□□□□ -1.23
PDZRN4-203ENST00000539469 SLC15A2Q16348 729 aa7.35□□□□□ -1.23
PDZRN4-203ENST00000539469 LRRC24Q50LG9 513 aa7.35□□□□□ -1.23
PDZRN4-203ENST00000539469 ATG9AQ7Z3C6 839 aa7.35□□□□□ -1.23
PDZRN4-203ENST00000539469 NPAS4Q8IUM7 802 aa7.35□□□□□ -1.23
PDZRN4-203ENST00000539469 PLEKHM2Q8IWE5 1019 aa7.35□□□□□ -1.23
PDZRN4-203ENST00000539469 SETDB2Q96T68 719 aa7.35□□□□□ -1.23
PDZRN4-203ENST00000539469 TANGO6Q9C0B7 1094 aa7.35□□□□□ -1.23
PDZRN4-203ENST00000539469 TM4SF1P30408 202 aa7.34□□□□□ -1.23
PDZRN4-203ENST00000539469 SF3A1Q15459 793 aaKnown RBP7.34□□□□□ -1.23
PDZRN4-203ENST00000539469 SLC51AQ86UW1 340 aa7.34□□□□□ -1.23
PDZRN4-203ENST00000539469 TEX2Q8IWB9 1127 aa7.34□□□□□ -1.23
PDZRN4-203ENST00000539469 SEC31BQ9NQW1 1179 aa7.34□□□□□ -1.23
PDZRN4-203ENST00000539469 POLRMTO00411 1230 aaKnown RBP7.34□□□□□ -1.23
PDZRN4-203ENST00000539469 PITPNM1O00562 1244 aa7.34□□□□□ -1.23
PDZRN4-203ENST00000539469 GSPT1P15170 499 aaKnown RBP7.34□□□□□ -1.23
PDZRN4-203ENST00000539469 ITGA6P23229 1130 aa7.34□□□□□ -1.23
PDZRN4-203ENST00000539469 SF3B2Q13435 895 aaKnown RBP7.34□□□□□ -1.23
PDZRN4-203ENST00000539469 MSL1Q68DK7 614 aa7.34□□□□□ -1.23
PDZRN4-203ENST00000539469 NBPF5PQ86XG9 351 aaPredicted RBP7.34□□□□□ -1.23
PDZRN4-203ENST00000539469 UPF1Q92900 1129 aaKnown RBP eCLIP7.34□□□□□ -1.23
PDZRN4-203ENST00000539469 TLR7Q9NYK1 1049 aaKnown RBP7.34□□□□□ -1.23
PDZRN4-203ENST00000539469 PCDH10Q9P2E7 1040 aa7.34□□□□□ -1.23
PDZRN4-203ENST00000539469 PRR5LQ6MZQ0 368 aa7.33□□□□□ -1.24
PDZRN4-203ENST00000539469 KIF1BPQ96EK5 621 aa7.33□□□□□ -1.24
PDZRN4-203ENST00000539469 TBC1D32Q96NH3 1257 aa7.33□□□□□ -1.24
PDZRN4-203ENST00000539469 ZNF609O15014 1411 aa7.33□□□□□ -1.24
PDZRN4-203ENST00000539469 PARNO95453 639 aaKnown RBP7.33□□□□□ -1.24
PDZRN4-203ENST00000539469 TFCP2Q12800 502 aa7.33□□□□□ -1.24
PDZRN4-203ENST00000539469 OS9Q13438 667 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms