RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 SPATA31A7Q8IWB4 1347 aa21.09■□□□□ 0.97
GNE-204ENST00000539208 PHLPP1O60346 1717 aa21.09■□□□□ 0.97
GNE-204ENST00000539208 LOC102724428A0A0B4J2F2 783 aa21.09■□□□□ 0.97
GNE-204ENST00000539208 SIK1P57059 783 aa21.09■□□□□ 0.97
GNE-204ENST00000539208 TPRNQ4KMQ1 711 aa21.09■□□□□ 0.97
GNE-204ENST00000539208 SLC9C2Q5TAH2 1124 aa21.09■□□□□ 0.97
GNE-204ENST00000539208 ATL3Q6DD88 541 aa21.09■□□□□ 0.97
GNE-204ENST00000539208 BARGINQ6ZT62 677 aa21.09■□□□□ 0.97
GNE-204ENST00000539208 LTBP4Q8N2S1 1624 aa21.08■□□□□ 0.97
GNE-204ENST00000539208 GOLGA6L4A6NEF3 574 aa21.08■□□□□ 0.97
GNE-204ENST00000539208 ZNF213O14771 459 aa21.08■□□□□ 0.97
GNE-204ENST00000539208 CAMTA2O94983 1202 aa21.08■□□□□ 0.97
GNE-204ENST00000539208 ADAMTS2O95450 1211 aa21.08■□□□□ 0.97
GNE-204ENST00000539208 NCOA7Q8NI08 942 aa21.08■□□□□ 0.97
GNE-204ENST00000539208 PIH1D3Q9NQM4 214 aaKnown RBP21.08■□□□□ 0.97
GNE-204ENST00000539208 RTL9Q8NET4 1388 aa21.08■□□□□ 0.97
GNE-204ENST00000539208 DDX60Q8IY21 1712 aaKnown RBP21.07■□□□□ 0.96
GNE-204ENST00000539208 HCLS1P14317 486 aaPredicted RBP21.07■□□□□ 0.96
GNE-204ENST00000539208 PHKA1P46020 1223 aa21.07■□□□□ 0.96
GNE-204ENST00000539208 CCT2P78371 535 aaKnown RBP21.07■□□□□ 0.96
GNE-204ENST00000539208 CHST3Q7LGC8 479 aa21.07■□□□□ 0.96
GNE-204ENST00000539208 DDX19AQ9NUU7 478 aaKnown RBP21.07■□□□□ 0.96
GNE-204ENST00000539208 LIG1P18858 919 aa21.07■□□□□ 0.96
GNE-204ENST00000539208 NUP62CLQ9H1M0 184 aa21.07■□□□□ 0.96
GNE-204ENST00000539208 PRC1O43663 620 aa21.06■□□□□ 0.96
GNE-204ENST00000539208 CCDC192P0DO97 292 aa21.06■□□□□ 0.96
GNE-204ENST00000539208 ADD1P35611 737 aaKnown RBP21.06■□□□□ 0.96
GNE-204ENST00000539208 HAND2P61296 217 aa21.06■□□□□ 0.96
GNE-204ENST00000539208 NCOA5Q9HCD5 579 aaKnown RBP21.06■□□□□ 0.96
GNE-204ENST00000539208 SLC5A1P13866 664 aa21.06■□□□□ 0.96
GNE-204ENST00000539208 ITPK1Q13572 414 aa21.06■□□□□ 0.96
GNE-204ENST00000539208 MAP3K11Q16584 847 aa21.06■□□□□ 0.96
GNE-204ENST00000539208 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.06■□□□□ 0.96
GNE-204ENST00000539208 ZKSCAN5Q9Y2L8 839 aa21.06■□□□□ 0.96
GNE-204ENST00000539208 MYH15Q9Y2K3 1946 aa21.05■□□□□ 0.96
GNE-204ENST00000539208 DHX16O60231 1041 aaKnown RBP21.05■□□□□ 0.96
GNE-204ENST00000539208 RALYLQ86SE5 291 aaKnown RBP21.05■□□□□ 0.96
GNE-204ENST00000539208 SMARCC1Q92922 1105 aaPredicted RBP21.05■□□□□ 0.96
GNE-204ENST00000539208 ACSBG1Q96GR2 724 aa21.05■□□□□ 0.96
GNE-204ENST00000539208 PGBD1Q96JS3 809 aa21.05■□□□□ 0.96
GNE-204ENST00000539208 TCRBV5S4A2TA0A5A2 114 aa21.04■□□□□ 0.96
GNE-204ENST00000539208 ZNF500O60304 480 aaPredicted RBP21.04■□□□□ 0.96
GNE-204ENST00000539208 PDE6AP16499 860 aa21.04■□□□□ 0.96
GNE-204ENST00000539208 RBM43Q6ZSC3 357 aaKnown RBP21.04■□□□□ 0.96
GNE-204ENST00000539208 LAMB2P55268 1798 aa21.04■□□□□ 0.96
GNE-204ENST00000539208 ZNF532Q9HCE3 1301 aa21.04■□□□□ 0.96
GNE-204ENST00000539208 IDH1O75874 414 aaKnown RBP21.04■□□□□ 0.96
GNE-204ENST00000539208 ANTXR2P58335 489 aa21.04■□□□□ 0.96
GNE-204ENST00000539208 CCDC152Q4G0S7 254 aa21.04■□□□□ 0.96
GNE-204ENST00000539208 MPHOSPH8Q99549 860 aa21.04■□□□□ 0.96
GNE-204ENST00000539208 DACT1Q9NYF0 836 aa21.04■□□□□ 0.96
GNE-204ENST00000539208 RCOR1Q9UKL0 485 aa21.04■□□□□ 0.96
GNE-204ENST00000539208 CARMIL3Q8ND23 1372 aa21.04■□□□□ 0.96
GNE-204ENST00000539208 NTSR2O95665 410 aa21.03■□□□□ 0.96
GNE-204ENST00000539208 ALX1Q15699 326 aa21.03■□□□□ 0.96
GNE-204ENST00000539208 SPATA5Q8NB90 893 aa21.03■□□□□ 0.96
GNE-204ENST00000539208 RGS22Q8NE09 1264 aa21.03■□□□□ 0.96
GNE-204ENST00000539208 CLSTN2Q9H4D0 955 aa21.03■□□□□ 0.96
GNE-204ENST00000539208 NAP1L2Q9ULW6 460 aaPredicted RBP21.03■□□□□ 0.96
GNE-204ENST00000539208 ZNF831Q5JPB2 1677 aa21.03■□□□□ 0.96
GNE-204ENST00000539208 ZMYM6O95789 1325 aa21.03■□□□□ 0.96
GNE-204ENST00000539208 KDM4AO75164 1064 aa21.03■□□□□ 0.96
GNE-204ENST00000539208 FDPSP14324 419 aaKnown RBP21.03■□□□□ 0.96
GNE-204ENST00000539208 MYH14Q7Z406 1995 aaKnown RBP21.02■□□□□ 0.96
GNE-204ENST00000539208 HELBQ8NG08 1087 aaPredicted RBP21.02■□□□□ 0.96
GNE-204ENST00000539208 ZNF396Q96N95 335 aaPredicted RBP21.02■□□□□ 0.96
GNE-204ENST00000539208 NBPF3Q9H094 633 aa21.02■□□□□ 0.96
GNE-204ENST00000539208 GPHNQ9NQX3 736 aaPredicted RBP21.02■□□□□ 0.96
GNE-204ENST00000539208 DOCK2Q92608 1830 aa21.02■□□□□ 0.96
GNE-204ENST00000539208 TRDNQ13061 729 aa21.02■□□□□ 0.95
GNE-204ENST00000539208 TNMDQ9H2S6 317 aa21.02■□□□□ 0.95
GNE-204ENST00000539208 HPS5Q9UPZ3 1129 aa21.02■□□□□ 0.95
GNE-204ENST00000539208 MYO5AQ9Y4I1 1855 aaKnown RBP21.02■□□□□ 0.95
GNE-204ENST00000539208 KLF18A0A0U1RQI7 1052 aa21.01■□□□□ 0.95
GNE-204ENST00000539208 STRBPQ96SI9 672 aaKnown RBP21.01■□□□□ 0.95
GNE-204ENST00000539208 SEC31BQ9NQW1 1179 aa21.01■□□□□ 0.95
GNE-204ENST00000539208 USP25Q9UHP3 1055 aa21.01■□□□□ 0.95
GNE-204ENST00000539208 WWC3Q9ULE0 1092 aa21.01■□□□□ 0.95
GNE-204ENST00000539208 NIP7Q9Y221 180 aaKnown RBP eCLIP21■□□□□ 0.95
GNE-204ENST00000539208 ADCY5O95622 1261 aa21■□□□□ 0.95
GNE-204ENST00000539208 IGHMBP2P38935 993 aaKnown RBP21■□□□□ 0.95
GNE-204ENST00000539208 MAP3K12Q12852 859 aa21■□□□□ 0.95
GNE-204ENST00000539208 CLEC4GQ6UXB4 293 aa21■□□□□ 0.95
GNE-204ENST00000539208 BICD2Q8TD16 824 aa21■□□□□ 0.95
GNE-204ENST00000539208 ZNF652Q9Y2D9 606 aa21■□□□□ 0.95
GNE-204ENST00000539208 COL5A3P25940 1745 aaPredicted RBP21■□□□□ 0.95
GNE-204ENST00000539208 A0A0G2JS52 829 aa20.99■□□□□ 0.95
GNE-204ENST00000539208 RASGRF1Q13972 1273 aa20.99■□□□□ 0.95
GNE-204ENST00000539208 BCORQ6W2J9 1755 aa20.99■□□□□ 0.95
GNE-204ENST00000539208 GOLGA8BA8MQT2 603 aa20.99■□□□□ 0.95
GNE-204ENST00000539208 NR1I2O75469 434 aa20.99■□□□□ 0.95
GNE-204ENST00000539208 TYRO3Q06418 890 aa20.99■□□□□ 0.95
GNE-204ENST00000539208 CAMK4Q16566 473 aa20.99■□□□□ 0.95
GNE-204ENST00000539208 FAM200AQ8TCP9 573 aa20.99■□□□□ 0.95
GNE-204ENST00000539208 AIDAQ96BJ3 306 aa20.99■□□□□ 0.95
GNE-204ENST00000539208 PATL2C9JE40 543 aaKnown RBP20.98■□□□□ 0.95
GNE-204ENST00000539208 OFD1O75665 1012 aa20.98■□□□□ 0.95
GNE-204ENST00000539208 TBC1D10CQ8IV04 446 aa20.98■□□□□ 0.95
GNE-204ENST00000539208 ANGEL1Q9UNK9 670 aaKnown RBP20.98■□□□□ 0.95
GNE-204ENST00000539208 MRVI1Q9Y6F6 885 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms