RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 QTRT2Q9H974 415 aaKnown RBP5.89□□□□□ -1.47
SNHG1-208ENST00000538266 KLK14Q9P0G3 267 aa5.89□□□□□ -1.47
SNHG1-208ENST00000538266 LRFN2Q9ULH4 789 aa5.89□□□□□ -1.47
SNHG1-208ENST00000538266 PCDHGC4Q9Y5F7 938 aa5.89□□□□□ -1.47
SNHG1-208ENST00000538266 ACEP12821 1306 aa5.89□□□□□ -1.47
SNHG1-208ENST00000538266 KIF7Q2M1P5 1343 aa5.89□□□□□ -1.47
SNHG1-208ENST00000538266 POLR3AO14802 1390 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-208ENST00000538266 MYOM1P52179 1685 aa5.88□□□□□ -1.47
SNHG1-208ENST00000538266 GPR25O00155 361 aa5.88□□□□□ -1.47
SNHG1-208ENST00000538266 BRD1O95696 1058 aa5.88□□□□□ -1.47
SNHG1-208ENST00000538266 THBS1P07996 1170 aa5.88□□□□□ -1.47
SNHG1-208ENST00000538266 DGKZQ13574 1117 aa5.88□□□□□ -1.47
SNHG1-208ENST00000538266 TREML4Q6UXN2 200 aa5.88□□□□□ -1.47
SNHG1-208ENST00000538266 ZNF280CQ8ND82 737 aa5.88□□□□□ -1.47
SNHG1-208ENST00000538266 IFT43Q96FT9 208 aa5.88□□□□□ -1.47
SNHG1-208ENST00000538266 MYO19Q96H55 970 aa5.88□□□□□ -1.47
SNHG1-208ENST00000538266 TRERF1Q96PN7 1200 aa5.88□□□□□ -1.47
SNHG1-208ENST00000538266 SLC12A5Q9H2X9 1139 aa5.88□□□□□ -1.47
SNHG1-208ENST00000538266 MTMR7Q9Y216 660 aa5.88□□□□□ -1.47
SNHG1-208ENST00000538266 GPC6Q9Y625 555 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-208ENST00000538266 ERBB4Q15303 1308 aa5.88□□□□□ -1.47
SNHG1-208ENST00000538266 KTN1Q86UP2 1357 aaKnown RBP5.88□□□□□ -1.47
SNHG1-208ENST00000538266 CCDC7Q96M83 1385 aa5.88□□□□□ -1.47
SNHG1-208ENST00000538266 USP6P35125 1406 aa5.88□□□□□ -1.47
SNHG1-208ENST00000538266 ATXN7O15265 892 aaPredicted RBP5.87□□□□□ -1.47
SNHG1-208ENST00000538266 BRD2P25440 801 aaKnown RBP5.87□□□□□ -1.47
SNHG1-208ENST00000538266 UBAP2LQ14157 1087 aaKnown RBP5.87□□□□□ -1.47
SNHG1-208ENST00000538266 HIF1AQ16665 826 aa5.87□□□□□ -1.47
SNHG1-208ENST00000538266 KRT28Q7Z3Y7 464 aa5.87□□□□□ -1.47
SNHG1-208ENST00000538266 GTF3C2Q8WUA4 911 aaPredicted RBP5.87□□□□□ -1.47
SNHG1-208ENST00000538266 DDX17Q92841 729 aaKnown RBP5.87□□□□□ -1.47
SNHG1-208ENST00000538266 LRRC59Q96AG4 307 aaKnown RBP5.87□□□□□ -1.47
SNHG1-208ENST00000538266 HSH2DQ96JZ2 352 aa5.87□□□□□ -1.47
SNHG1-208ENST00000538266 CFHR5Q9BXR6 569 aa5.87□□□□□ -1.47
SNHG1-208ENST00000538266 PHF24Q9UPV7 400 aa5.87□□□□□ -1.47
SNHG1-208ENST00000538266 WASHC2AQ641Q2 1341 aa5.87□□□□□ -1.47
SNHG1-208ENST00000538266 A0A1W2PP64 1363 aa5.87□□□□□ -1.47
SNHG1-208ENST00000538266 BRD4O60885 1362 aaPredicted RBP5.87□□□□□ -1.47
SNHG1-208ENST00000538266 ANKRD36BQ8N2N9 1353 aa5.87□□□□□ -1.47
SNHG1-208ENST00000538266 TNS3Q68CZ2 1445 aa5.87□□□□□ -1.47
SNHG1-208ENST00000538266 PXDNQ92626 1479 aa5.87□□□□□ -1.47
SNHG1-208ENST00000538266 COL16A1Q07092 1604 aaPredicted RBP5.87□□□□□ -1.47
SNHG1-208ENST00000538266 MON2Q7Z3U7 1717 aa5.87□□□□□ -1.47
SNHG1-208ENST00000538266 AKAP12Q02952 1782 aa5.87□□□□□ -1.47
SNHG1-208ENST00000538266 CPSF1Q10570 1443 aaKnown RBP5.86□□□□□ -1.47
SNHG1-208ENST00000538266 EDC4Q6P2E9 1401 aaKnown RBP5.86□□□□□ -1.47
SNHG1-208ENST00000538266 SBNO1A3KN83 1393 aa5.86□□□□□ -1.47
SNHG1-208ENST00000538266 ARHGEF10O15013 1369 aa5.86□□□□□ -1.47
SNHG1-208ENST00000538266 KHNYNO15037 678 aaKnown RBP5.86□□□□□ -1.47
SNHG1-208ENST00000538266 BNIP3LO60238 219 aa5.86□□□□□ -1.47
SNHG1-208ENST00000538266 HSPA1LP34931 641 aa5.86□□□□□ -1.47
SNHG1-208ENST00000538266 HOMEZQ8IX15 550 aa5.86□□□□□ -1.47
SNHG1-208ENST00000538266 CEP63Q96MT8 703 aa5.86□□□□□ -1.47
SNHG1-208ENST00000538266 BCS1LQ9Y276 419 aa5.86□□□□□ -1.47
SNHG1-208ENST00000538266 TRPM3Q9HCF6 1732 aaPredicted RBP5.85□□□□□ -1.47
SNHG1-208ENST00000538266 NRKQ7Z2Y5 1582 aa5.85□□□□□ -1.47
SNHG1-208ENST00000538266 CD163L1Q9NR16 1453 aa5.85□□□□□ -1.47
SNHG1-208ENST00000538266 NSD3Q9BZ95 1437 aa5.85□□□□□ -1.47
SNHG1-208ENST00000538266 JCADQ9P266 1359 aa5.85□□□□□ -1.47
SNHG1-208ENST00000538266 CGNL1Q0VF96 1302 aa5.85□□□□□ -1.47
SNHG1-208ENST00000538266 SPATA31A3Q5VYP0 1347 aa5.85□□□□□ -1.47
SNHG1-208ENST00000538266 TTC21AQ8NDW8 1320 aa5.85□□□□□ -1.47
SNHG1-208ENST00000538266 MICAL2O94851 1124 aa5.85□□□□□ -1.47
SNHG1-208ENST00000538266 ABL1P00519 1130 aa5.85□□□□□ -1.47
SNHG1-208ENST00000538266 VSIG8P0DPA2 414 aa5.85□□□□□ -1.47
SNHG1-208ENST00000538266 MAPTP10636 758 aaKnown RBP5.85□□□□□ -1.47
SNHG1-208ENST00000538266 TNP2Q05952 138 aa5.85□□□□□ -1.47
SNHG1-208ENST00000538266 SAMD5Q5TGI4 173 aa5.85□□□□□ -1.47
SNHG1-208ENST00000538266 DIEXFQ68CQ4 756 aaKnown RBP5.85□□□□□ -1.47
SNHG1-208ENST00000538266 BTLAQ7Z6A9 289 aa5.85□□□□□ -1.47
SNHG1-208ENST00000538266 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.85□□□□□ -1.47
SNHG1-208ENST00000538266 ABTB2Q8N961 1025 aa5.85□□□□□ -1.47
SNHG1-208ENST00000538266 ABHD17AQ96GS6 310 aa5.85□□□□□ -1.47
SNHG1-208ENST00000538266 COL25A1Q9BXS0 654 aaPredicted RBP5.85□□□□□ -1.47
SNHG1-208ENST00000538266 STIM2Q9P246 746 aa5.85□□□□□ -1.47
SNHG1-208ENST00000538266 KNSTRNQ9Y448 316 aa5.85□□□□□ -1.47
SNHG1-208ENST00000538266 DCDC2BA2VCK2 349 aa5.84□□□□□ -1.47
SNHG1-208ENST00000538266 TGFBR3LH3BV60 316 aa5.84□□□□□ -1.47
SNHG1-208ENST00000538266 GMPRP36959 345 aa5.84□□□□□ -1.47
SNHG1-208ENST00000538266 FKBP4Q02790 459 aaKnown RBP eCLIP5.84□□□□□ -1.47
SNHG1-208ENST00000538266 NLRP13Q86W25 1043 aa5.84□□□□□ -1.47
SNHG1-208ENST00000538266 AEBP1Q8IUX7 1158 aa5.84□□□□□ -1.47
SNHG1-208ENST00000538266 PANK3Q9H999 370 aa5.84□□□□□ -1.47
SNHG1-208ENST00000538266 ANO2Q9NQ90 1003 aa5.84□□□□□ -1.47
SNHG1-208ENST00000538266 NDFIP2Q9NV92 336 aa5.84□□□□□ -1.47
SNHG1-208ENST00000538266 DMGDHQ9UI17 866 aaKnown RBP5.84□□□□□ -1.47
SNHG1-208ENST00000538266 ATXN7L1Q9ULK2 861 aaPredicted RBP5.84□□□□□ -1.47
SNHG1-208ENST00000538266 SHPRHQ149N8 1683 aa5.84□□□□□ -1.47
SNHG1-208ENST00000538266 ALS2Q96Q42 1657 aa5.84□□□□□ -1.47
SNHG1-208ENST00000538266 KIF20BQ96Q89 1820 aa5.83□□□□□ -1.48
SNHG1-208ENST00000538266 PNPLA6Q8IY17 1366 aa5.83□□□□□ -1.48
SNHG1-208ENST00000538266 SPATA31A6Q5VVP1 1343 aa5.83□□□□□ -1.48
SNHG1-208ENST00000538266 TTC21BQ7Z4L5 1316 aa5.83□□□□□ -1.48
SNHG1-208ENST00000538266 PIK3C2AO00443 1686 aa5.83□□□□□ -1.48
SNHG1-208ENST00000538266 TNFRSF10BO14763 440 aa5.83□□□□□ -1.48
SNHG1-208ENST00000538266 FAM157BP0CG42 384 aa5.83□□□□□ -1.48
SNHG1-208ENST00000538266 MX2P20592 715 aa5.83□□□□□ -1.48
SNHG1-208ENST00000538266 SERPINB4P48594 390 aa5.83□□□□□ -1.48
SNHG1-208ENST00000538266 CTBSQ01459 385 aa5.83□□□□□ -1.48
SNHG1-208ENST00000538266 SFSWAPQ12872 951 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 225.8 ms