RNA–Protein interactions for RNA: ENST00000537745.5

RAN-208, Transcript of RAN, member RAS oncogene family, human

TSL 1 (best)

Gene RAN, Length 1,065 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAN-208	ENST00000537745	MYD88	Q99836	296 aa		13.67	□□□□□ -0.22
RAN-208	ENST00000537745	CHL1	O00533	1208 aa		13.66	□□□□□ -0.22
RAN-208	ENST00000537745	ALDH1A1	P00352	501 aa		13.66	□□□□□ -0.22
RAN-208	ENST00000537745	EN2	P19622	333 aa	Predicted RBP	13.66	□□□□□ -0.22
RAN-208	ENST00000537745	FXR1	P51114	621 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
RAN-208	ENST00000537745	DACT2	Q5SW24	774 aa		13.66	□□□□□ -0.22
RAN-208	ENST00000537745	CCDC146	Q8IYE0	955 aa		13.66	□□□□□ -0.22
RAN-208	ENST00000537745	SLC10A4	Q96EP9	437 aa		13.66	□□□□□ -0.22
RAN-208	ENST00000537745	CFHR5	Q9BXR6	569 aa		13.66	□□□□□ -0.22
RAN-208	ENST00000537745	HYPK	Q9NX55	129 aa		13.66	□□□□□ -0.22
RAN-208	ENST00000537745	BRCA2	P51587	3418 aa		13.65	□□□□□ -0.22
RAN-208	ENST00000537745	PDE8A	O60658	829 aa		13.65	□□□□□ -0.22
RAN-208	ENST00000537745	HSP90B1	P14625	803 aa	Known RBP	13.65	□□□□□ -0.22
RAN-208	ENST00000537745	TRIM28	Q13263	835 aa	Known RBP	13.65	□□□□□ -0.22
RAN-208	ENST00000537745	SPNS2	Q8IVW8	549 aa		13.65	□□□□□ -0.22
RAN-208	ENST00000537745	CD99L2	Q8TCZ2	262 aa		13.65	□□□□□ -0.22
RAN-208	ENST00000537745	MANSC4	A6NHS7	340 aa	Predicted RBP	13.64	□□□□□ -0.23
RAN-208	ENST00000537745	VASP	P50552	380 aa	Predicted RBP	13.64	□□□□□ -0.23
RAN-208	ENST00000537745	GOLGA2	Q08379	1002 aa		13.64	□□□□□ -0.23
RAN-208	ENST00000537745	MMRN1	Q13201	1228 aa		13.64	□□□□□ -0.23
RAN-208	ENST00000537745	LDLRAD1	Q5T700	205 aa		13.64	□□□□□ -0.23
RAN-208	ENST00000537745	FBXO3	Q9UK99	471 aa		13.64	□□□□□ -0.23
RAN-208	ENST00000537745	PTPN22	Q9Y2R2	807 aa		13.64	□□□□□ -0.23
RAN-208	ENST00000537745	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
RAN-208	ENST00000537745	DUSP27	Q5VZP5	1158 aa		13.63	□□□□□ -0.23
RAN-208	ENST00000537745	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.63	□□□□□ -0.23
RAN-208	ENST00000537745	KIAA0825	Q8IV33	1275 aa		13.63	□□□□□ -0.23
RAN-208	ENST00000537745	ERO1A	Q96HE7	468 aa		13.63	□□□□□ -0.23
RAN-208	ENST00000537745	CLMN	Q96JQ2	1002 aa		13.63	□□□□□ -0.23
RAN-208	ENST00000537745	PHAX	Q9H814	394 aa	Known RBP	13.63	□□□□□ -0.23
RAN-208	ENST00000537745	MED23	Q9ULK4	1368 aa		13.62	□□□□□ -0.23
RAN-208	ENST00000537745	PCCA	P05165	728 aa	Predicted RBP	13.62	□□□□□ -0.23
RAN-208	ENST00000537745	INHBE	P58166	350 aa		13.62	□□□□□ -0.23
RAN-208	ENST00000537745	STRIP1	Q5VSL9	837 aa		13.62	□□□□□ -0.23
RAN-208	ENST00000537745	WNK4	Q96J92	1243 aa		13.62	□□□□□ -0.23
RAN-208	ENST00000537745	EFCC1	Q9HA90	598 aa		13.62	□□□□□ -0.23
RAN-208	ENST00000537745	CWC25	Q9NXE8	425 aa	Predicted RBP	13.62	□□□□□ -0.23
RAN-208	ENST00000537745	MYO3B	Q8WXR4	1341 aa		13.62	□□□□□ -0.23
RAN-208	ENST00000537745	MYC	P01106	439 aa	Predicted RBP	13.61	□□□□□ -0.23
RAN-208	ENST00000537745	HOXB7	P09629	217 aa		13.61	□□□□□ -0.23
RAN-208	ENST00000537745	CCT4	P50991	539 aa	Known RBP	13.61	□□□□□ -0.23
RAN-208	ENST00000537745	CRHR2	Q13324	411 aa		13.61	□□□□□ -0.23
RAN-208	ENST00000537745	TTLL5	Q6EMB2	1281 aa		13.61	□□□□□ -0.23
RAN-208	ENST00000537745	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.61	□□□□□ -0.23
RAN-208	ENST00000537745	TXNRD3	Q86VQ6	643 aa		13.61	□□□□□ -0.23
RAN-208	ENST00000537745	CCDC191	Q8NCU4	936 aa		13.61	□□□□□ -0.23
RAN-208	ENST00000537745	CDC5L	Q99459	802 aa	Known RBP	13.61	□□□□□ -0.23
RAN-208	ENST00000537745	DEFB129	Q9H1M3	183 aa		13.61	□□□□□ -0.23
RAN-208	ENST00000537745	MINPP1	Q9UNW1	487 aa		13.61	□□□□□ -0.23
RAN-208	ENST00000537745	SPEF2	Q9C093	1822 aa		13.61	□□□□□ -0.23
RAN-208	ENST00000537745	ELL2	O00472	640 aa	Predicted RBP	13.6	□□□□□ -0.23
RAN-208	ENST00000537745	CHRM1	P11229	460 aa	Predicted RBP	13.6	□□□□□ -0.23
RAN-208	ENST00000537745	GTF2I	P78347	998 aa		13.6	□□□□□ -0.23
RAN-208	ENST00000537745	ARMC5	Q96C12	935 aa		13.6	□□□□□ -0.23
RAN-208	ENST00000537745	COA1	Q9GZY4	146 aa		13.6	□□□□□ -0.23
RAN-208	ENST00000537745	KIAA0100	Q14667	2235 aa	Known RBP	13.6	□□□□□ -0.23
RAN-208	ENST00000537745	POTEB3	A0JP26	581 aa		13.59	□□□□□ -0.23
RAN-208	ENST00000537745	SNPH	O15079	494 aa		13.59	□□□□□ -0.23
RAN-208	ENST00000537745	PPP1R12B	O60237	982 aa	Predicted RBP	13.59	□□□□□ -0.23
RAN-208	ENST00000537745	ZBTB48	P10074	688 aa	Predicted RBP	13.59	□□□□□ -0.23
RAN-208	ENST00000537745	KLRK1	P26718	216 aa		13.59	□□□□□ -0.23
RAN-208	ENST00000537745	CTSW	P56202	376 aa		13.59	□□□□□ -0.23
RAN-208	ENST00000537745	CAP1	Q01518	475 aa		13.59	□□□□□ -0.23
RAN-208	ENST00000537745	SP3	Q02447	781 aa		13.59	□□□□□ -0.23
RAN-208	ENST00000537745	OTUD7B	Q6GQQ9	843 aa		13.59	□□□□□ -0.23
RAN-208	ENST00000537745	POTEB	Q6S5H4	581 aa		13.59	□□□□□ -0.23
RAN-208	ENST00000537745	GREM2	Q9H772	168 aa		13.59	□□□□□ -0.23
RAN-208	ENST00000537745	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.58	□□□□□ -0.23
RAN-208	ENST00000537745	ZNF646	O15015	1829 aa	Predicted RBP	13.58	□□□□□ -0.24
RAN-208	ENST00000537745	CLRN2	A0PK11	232 aa		13.58	□□□□□ -0.24
RAN-208	ENST00000537745		F8W031	263 aa	Predicted RBP	13.58	□□□□□ -0.24
RAN-208	ENST00000537745	GSE1	Q14687	1217 aa		13.58	□□□□□ -0.24
RAN-208	ENST00000537745	DLGAP5	Q15398	846 aa		13.58	□□□□□ -0.24
RAN-208	ENST00000537745	SLC4A8	Q2Y0W8	1093 aa		13.58	□□□□□ -0.24
RAN-208	ENST00000537745	MBIP	Q9NS73	344 aa		13.58	□□□□□ -0.24
RAN-208	ENST00000537745	BSDC1	Q9NW68	430 aa	Predicted RBP	13.58	□□□□□ -0.24
RAN-208	ENST00000537745	PCDHAC2	Q9Y5I4	1007 aa		13.58	□□□□□ -0.24
RAN-208	ENST00000537745	SZT2	Q5T011	3432 aa		13.57	□□□□□ -0.24
RAN-208	ENST00000537745	GJA5	P36382	358 aa		13.57	□□□□□ -0.24
RAN-208	ENST00000537745	SLC9C1	Q4G0N8	1177 aa		13.57	□□□□□ -0.24
RAN-208	ENST00000537745	TTLL11	Q8NHH1	800 aa		13.57	□□□□□ -0.24
RAN-208	ENST00000537745	ZBED3	Q96IU2	234 aa	Predicted RBP	13.57	□□□□□ -0.24
RAN-208	ENST00000537745	METTL22	Q9BUU2	404 aa	Predicted RBP	13.57	□□□□□ -0.24
RAN-208	ENST00000537745	VEZT	Q9HBM0	779 aa		13.57	□□□□□ -0.24
RAN-208	ENST00000537745		H0YGN5	161 aa		13.56	□□□□□ -0.24
RAN-208	ENST00000537745	KCNJ4	P48050	445 aa		13.56	□□□□□ -0.24
RAN-208	ENST00000537745	PSEN1	P49768	467 aa		13.56	□□□□□ -0.24
RAN-208	ENST00000537745	MMP14	P50281	582 aa		13.56	□□□□□ -0.24
RAN-208	ENST00000537745	MAP3K11	Q16584	847 aa		13.56	□□□□□ -0.24
RAN-208	ENST00000537745	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.56	□□□□□ -0.24
RAN-208	ENST00000537745	ZNF333	Q96JL9	665 aa		13.56	□□□□□ -0.24
RAN-208	ENST00000537745	PTPN18	Q99952	460 aa		13.56	□□□□□ -0.24
RAN-208	ENST00000537745	MAP3K2	Q9Y2U5	619 aa		13.56	□□□□□ -0.24
RAN-208	ENST00000537745	LEMD3	Q9Y2U8	911 aa		13.56	□□□□□ -0.24
RAN-208	ENST00000537745	PTCH2	Q9Y6C5	1203 aa		13.56	□□□□□ -0.24
RAN-208	ENST00000537745	SSC5D	A1L4H1	1573 aa		13.56	□□□□□ -0.24
RAN-208	ENST00000537745	ZNF804B	A4D1E1	1349 aa		13.56	□□□□□ -0.24
RAN-208	ENST00000537745	DDX58	O95786	925 aa	Known RBP	13.55	□□□□□ -0.24
RAN-208	ENST00000537745	IGHMBP2	P38935	993 aa	Known RBP	13.55	□□□□□ -0.24
RAN-208	ENST00000537745	IREB2	P48200	963 aa	Known RBP	13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms