RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 VPS37DQ86XT2 251 aa21.51■■□□□ 1.03
GPN3-202ENST00000537466 LPIN2Q92539 896 aa21.51■■□□□ 1.03
GPN3-202ENST00000537466 CREBZFQ9NS37 354 aa21.51■■□□□ 1.03
GPN3-202ENST00000537466 COG6Q9Y2V7 657 aa21.51■■□□□ 1.03
GPN3-202ENST00000537466 FAM205AQ6ZU69 1335 aa21.5■■□□□ 1.03
GPN3-202ENST00000537466 ATP8B2P98198 1209 aa21.5■■□□□ 1.03
GPN3-202ENST00000537466 SCARF1Q14162 830 aa21.5■■□□□ 1.03
GPN3-202ENST00000537466 MVPQ14764 893 aaKnown RBP21.5■■□□□ 1.03
GPN3-202ENST00000537466 ATP2B3Q16720 1220 aa21.5■■□□□ 1.03
GPN3-202ENST00000537466 DLK2Q6UY11 383 aa21.5■■□□□ 1.03
GPN3-202ENST00000537466 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.5■■□□□ 1.03
GPN3-202ENST00000537466 TMEM88BA6NKF7 163 aa21.49■■□□□ 1.03
GPN3-202ENST00000537466 FKBP1AP62942 108 aaKnown RBP21.49■■□□□ 1.03
GPN3-202ENST00000537466 POLA2Q14181 598 aa21.49■■□□□ 1.03
GPN3-202ENST00000537466 C20orf194Q5TEA3 1177 aa21.49■■□□□ 1.03
GPN3-202ENST00000537466 OGFOD1Q8N543 542 aa21.49■■□□□ 1.03
GPN3-202ENST00000537466 GGA3Q9NZ52 723 aa21.49■■□□□ 1.03
GPN3-202ENST00000537466 F8W031 263 aaPredicted RBP21.48■■□□□ 1.03
GPN3-202ENST00000537466 NBPF9Q3BBW0 867 aa21.48■■□□□ 1.03
GPN3-202ENST00000537466 CDC37L1Q7L3B6 337 aa21.48■■□□□ 1.03
GPN3-202ENST00000537466 USP48Q86UV5 1035 aa21.48■■□□□ 1.03
GPN3-202ENST00000537466 SSH3Q8TE77 659 aa21.48■■□□□ 1.03
GPN3-202ENST00000537466 TFCP2Q12800 502 aa21.47■■□□□ 1.03
GPN3-202ENST00000537466 MFSD14BQ5SR56 506 aa21.47■■□□□ 1.03
GPN3-202ENST00000537466 ANGEL2Q5VTE6 544 aaKnown RBP21.47■■□□□ 1.03
GPN3-202ENST00000537466 CST9Q5W186 159 aa21.47■■□□□ 1.03
GPN3-202ENST00000537466 DCPSQ96C86 337 aaKnown RBP21.47■■□□□ 1.03
GPN3-202ENST00000537466 ADM5C9JUS6 153 aa21.46■■□□□ 1.03
GPN3-202ENST00000537466 CHAF1AQ13111 956 aaPredicted RBP21.46■■□□□ 1.03
GPN3-202ENST00000537466 KRT26Q7Z3Y9 468 aa21.46■■□□□ 1.03
GPN3-202ENST00000537466 KLRG1Q96E93 195 aa21.46■■□□□ 1.03
GPN3-202ENST00000537466 HDAC9Q9UKV0 1011 aa21.46■■□□□ 1.03
GPN3-202ENST00000537466 COL1A1P02452 1464 aaPredicted RBP21.46■■□□□ 1.03
GPN3-202ENST00000537466 WNT10BO00744 389 aa21.45■■□□□ 1.03
GPN3-202ENST00000537466 FRAT2O75474 233 aaPredicted RBP21.45■■□□□ 1.03
GPN3-202ENST00000537466 ADORA1P30542 326 aa21.45■■□□□ 1.03
GPN3-202ENST00000537466 TIMM10P62072 90 aa21.45■■□□□ 1.03
GPN3-202ENST00000537466 CEP85Q6P2H3 762 aa21.45■■□□□ 1.03
GPN3-202ENST00000537466 DDX19BQ9UMR2 479 aa21.45■■□□□ 1.03
GPN3-202ENST00000537466 MMP14P50281 582 aa21.45■■□□□ 1.02
GPN3-202ENST00000537466 SCAF8Q9UPN6 1271 aaKnown RBP21.45■■□□□ 1.02
GPN3-202ENST00000537466 PCDHAC2Q9Y5I4 1007 aa21.45■■□□□ 1.02
GPN3-202ENST00000537466 G3BP1Q13283 466 aaKnown RBP eCLIP21.44■■□□□ 1.02
GPN3-202ENST00000537466 PDE3AQ14432 1141 aa21.44■■□□□ 1.02
GPN3-202ENST00000537466 GRIK5Q16478 980 aa21.44■■□□□ 1.02
GPN3-202ENST00000537466 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.44■■□□□ 1.02
GPN3-202ENST00000537466 ZBED3Q96IU2 234 aaPredicted RBP21.44■■□□□ 1.02
GPN3-202ENST00000537466 ZNF408Q9H9D4 720 aa21.44■■□□□ 1.02
GPN3-202ENST00000537466 MKRN1Q9UHC7 482 aaKnown RBP21.44■■□□□ 1.02
GPN3-202ENST00000537466 A0A1B0GUL7 405 aa21.43■■□□□ 1.02
GPN3-202ENST00000537466 CELF2O95319 508 aaKnown RBP21.43■■□□□ 1.02
GPN3-202ENST00000537466 PHKA1P46020 1223 aa21.43■■□□□ 1.02
GPN3-202ENST00000537466 ZBTB40Q9NUA8 1239 aa21.43■■□□□ 1.02
GPN3-202ENST00000537466 SULF1Q8IWU6 871 aa21.42■■□□□ 1.02
GPN3-202ENST00000537466 AKAP2Q9Y2D5 859 aa21.42■■□□□ 1.02
GPN3-202ENST00000537466 PITPNM2Q9BZ72 1349 aa21.42■■□□□ 1.02
GPN3-202ENST00000537466 CNTNAP1P78357 1384 aa21.42■■□□□ 1.02
GPN3-202ENST00000537466 SURF6O75683 361 aaKnown RBP21.41■■□□□ 1.02
GPN3-202ENST00000537466 DLGAP5Q15398 846 aa21.41■■□□□ 1.02
GPN3-202ENST00000537466 CFAP100Q494V2 611 aa21.41■■□□□ 1.02
GPN3-202ENST00000537466 ABT1Q9ULW3 272 aaKnown RBP21.41■■□□□ 1.02
GPN3-202ENST00000537466 TTF2Q9UNY4 1162 aaKnown RBP21.41■■□□□ 1.02
GPN3-202ENST00000537466 CCDC102BQ68D86 513 aa21.4■■□□□ 1.02
GPN3-202ENST00000537466 MTMR14Q8NCE2 650 aa21.4■■□□□ 1.02
GPN3-202ENST00000537466 TBC1D22AQ8WUA7 517 aa21.4■■□□□ 1.02
GPN3-202ENST00000537466 XAGE2Q96GT9 111 aa21.4■■□□□ 1.02
GPN3-202ENST00000537466 AOX1Q06278 1338 aa21.4■■□□□ 1.02
GPN3-202ENST00000537466 PRMT6Q96LA8 375 aaPredicted RBP21.39■■□□□ 1.02
GPN3-202ENST00000537466 NEUROD6Q96NK8 337 aa21.39■■□□□ 1.02
GPN3-202ENST00000537466 NOP58Q9Y2X3 529 aaKnown RBP21.39■■□□□ 1.02
GPN3-202ENST00000537466 PCNTO95613 3336 aa21.39■■□□□ 1.01
GPN3-202ENST00000537466 OS9Q13438 667 aaPredicted RBP21.39■■□□□ 1.01
GPN3-202ENST00000537466 CDCA5Q96FF9 252 aa21.39■■□□□ 1.01
GPN3-202ENST00000537466 TLL2Q9Y6L7 1015 aa21.39■■□□□ 1.01
GPN3-202ENST00000537466 SPDYE2BA6NHP3 402 aa21.38■■□□□ 1.01
GPN3-202ENST00000537466 RASSF10A6NK89 507 aa21.38■■□□□ 1.01
GPN3-202ENST00000537466 SPDYE6P0CI01 402 aa21.38■■□□□ 1.01
GPN3-202ENST00000537466 RBM5P52756 815 aaKnown RBP eCLIP21.38■■□□□ 1.01
GPN3-202ENST00000537466 JMYQ8N9B5 988 aa21.38■■□□□ 1.01
GPN3-202ENST00000537466 GNL3LQ9NVN8 582 aaKnown RBP21.38■■□□□ 1.01
GPN3-202ENST00000537466 DEFB115Q30KQ5 88 aa21.37■■□□□ 1.01
GPN3-202ENST00000537466 SIRT2Q8IXJ6 389 aa21.37■■□□□ 1.01
GPN3-202ENST00000537466 WDR66Q8TBY9 1149 aa21.37■■□□□ 1.01
GPN3-202ENST00000537466 SERPINA10Q9UK55 444 aa21.37■■□□□ 1.01
GPN3-202ENST00000537466 AKAP11Q9UKA4 1901 aa21.36■■□□□ 1.01
GPN3-202ENST00000537466 MYH2Q9UKX2 1941 aa21.36■■□□□ 1.01
GPN3-202ENST00000537466 CRKP46108 304 aa21.36■■□□□ 1.01
GPN3-202ENST00000537466 VEGFBP49765 207 aa21.36■■□□□ 1.01
GPN3-202ENST00000537466 PRAMEF18Q5VWM3 479 aa21.36■■□□□ 1.01
GPN3-202ENST00000537466 SAPCD2Q86UD0 394 aa21.36■■□□□ 1.01
GPN3-202ENST00000537466 DENND2AQ9ULE3 1009 aa21.36■■□□□ 1.01
GPN3-202ENST00000537466 EXOC6BQ9Y2D4 811 aa21.36■■□□□ 1.01
GPN3-202ENST00000537466 CLRN2A0PK11 232 aa21.35■■□□□ 1.01
GPN3-202ENST00000537466 SEMA3EO15041 775 aa21.35■■□□□ 1.01
GPN3-202ENST00000537466 RRP1P56182 461 aaKnown RBP21.35■■□□□ 1.01
GPN3-202ENST00000537466 RASGRF1Q13972 1273 aa21.35■■□□□ 1.01
GPN3-202ENST00000537466 TNNI3KQ59H18 835 aa21.35■■□□□ 1.01
GPN3-202ENST00000537466 RPAP2Q8IXW5 612 aaPredicted RBP21.35■■□□□ 1.01
GPN3-202ENST00000537466 CHMP4BQ9H444 224 aaKnown RBP21.35■■□□□ 1.01
GPN3-202ENST00000537466 GPR108Q9NPR9 543 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms