RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-215ENST00000537296 FAM84BQ96KN1 310 aaPredicted RBP13.54□□□□□ -0.24
LDHA-215ENST00000537296 YTHDC1Q96MU7 727 aaKnown RBP13.54□□□□□ -0.24
LDHA-215ENST00000537296 PGAP2Q9UHJ9 254 aa13.54□□□□□ -0.24
LDHA-215ENST00000537296 PNMA6EA0A0J9YXQ4 647 aa13.53□□□□□ -0.24
LDHA-215ENST00000537296 SRGAP3O43295 1099 aa13.53□□□□□ -0.24
LDHA-215ENST00000537296 USP17L8P0C7I0 530 aa13.53□□□□□ -0.24
LDHA-215ENST00000537296 ZNF280AP59817 542 aaPredicted RBP13.53□□□□□ -0.24
LDHA-215ENST00000537296 ZNF804AQ7Z570 1209 aa13.53□□□□□ -0.24
LDHA-215ENST00000537296 ITPRIPQ8IWB1 547 aa13.53□□□□□ -0.24
LDHA-215ENST00000537296 RCAN3Q9UKA8 241 aa13.53□□□□□ -0.24
LDHA-215ENST00000537296 IQSEC3Q9UPP2 1182 aaPredicted RBP13.53□□□□□ -0.24
LDHA-215ENST00000537296 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.53□□□□□ -0.24
LDHA-215ENST00000537296 GNAI2P04899 355 aa13.52□□□□□ -0.25
LDHA-215ENST00000537296 FGFR2P21802 821 aa13.52□□□□□ -0.25
LDHA-215ENST00000537296 MTX1Q13505 466 aa13.52□□□□□ -0.25
LDHA-215ENST00000537296 KIAA0825Q8IV33 1275 aa13.52□□□□□ -0.25
LDHA-215ENST00000537296 SCAF8Q9UPN6 1271 aaKnown RBP13.52□□□□□ -0.25
LDHA-215ENST00000537296 MYH13Q9UKX3 1938 aa13.52□□□□□ -0.25
LDHA-215ENST00000537296 ARAP2Q8WZ64 1704 aa13.51□□□□□ -0.25
LDHA-215ENST00000537296 ZBTB7BO15156 539 aaPredicted RBP13.51□□□□□ -0.25
LDHA-215ENST00000537296 HIBADHP31937 336 aaKnown RBP13.51□□□□□ -0.25
LDHA-215ENST00000537296 TDRD7Q8NHU6 1098 aaKnown RBP13.51□□□□□ -0.25
LDHA-215ENST00000537296 MYOZ2Q9NPC6 264 aa13.51□□□□□ -0.25
LDHA-215ENST00000537296 COPRSQ9NQ92 184 aa13.51□□□□□ -0.25
LDHA-215ENST00000537296 ADM5C9JUS6 153 aa13.5□□□□□ -0.25
LDHA-215ENST00000537296 CIAO1O76071 339 aa13.5□□□□□ -0.25
LDHA-215ENST00000537296 BCAMP50895 628 aa13.5□□□□□ -0.25
LDHA-215ENST00000537296 PUM3Q15397 648 aaKnown RBP13.5□□□□□ -0.25
LDHA-215ENST00000537296 CST9Q5W186 159 aa13.5□□□□□ -0.25
LDHA-215ENST00000537296 FBXO33Q7Z6M2 555 aa13.5□□□□□ -0.25
LDHA-215ENST00000537296 ZC3H15Q8WU90 426 aaKnown RBP13.5□□□□□ -0.25
LDHA-215ENST00000537296 CREBZFQ9NS37 354 aa13.5□□□□□ -0.25
LDHA-215ENST00000537296 GGA3Q9NZ52 723 aa13.5□□□□□ -0.25
LDHA-215ENST00000537296 HDAC5Q9UQL6 1122 aa13.5□□□□□ -0.25
LDHA-215ENST00000537296 PCDHAC2Q9Y5I4 1007 aa13.5□□□□□ -0.25
LDHA-215ENST00000537296 TMEM88BA6NKF7 163 aa13.49□□□□□ -0.25
LDHA-215ENST00000537296 F8W031 263 aaPredicted RBP13.49□□□□□ -0.25
LDHA-215ENST00000537296 SASH1O94885 1247 aa13.49□□□□□ -0.25
LDHA-215ENST00000537296 SCARF1Q14162 830 aa13.49□□□□□ -0.25
LDHA-215ENST00000537296 NBPF9Q3BBW0 867 aa13.49□□□□□ -0.25
LDHA-215ENST00000537296 C20orf194Q5TEA3 1177 aa13.49□□□□□ -0.25
LDHA-215ENST00000537296 USP48Q86UV5 1035 aa13.49□□□□□ -0.25
LDHA-215ENST00000537296 KLRG1Q96E93 195 aa13.49□□□□□ -0.25
LDHA-215ENST00000537296 MKRN1Q9UHC7 482 aaKnown RBP13.49□□□□□ -0.25
LDHA-215ENST00000537296 MYO3BQ8WXR4 1341 aa13.49□□□□□ -0.25
LDHA-215ENST00000537296 IL15P40933 162 aaPredicted RBP13.49□□□□□ -0.25
LDHA-215ENST00000537296 GRIK5Q16478 980 aa13.49□□□□□ -0.25
LDHA-215ENST00000537296 ANGEL2Q5VTE6 544 aaKnown RBP13.49□□□□□ -0.25
LDHA-215ENST00000537296 COL1A1P02452 1464 aaPredicted RBP13.49□□□□□ -0.25
LDHA-215ENST00000537296 AOX1Q06278 1338 aa13.48□□□□□ -0.25
LDHA-215ENST00000537296 FAM205AQ6ZU69 1335 aa13.48□□□□□ -0.25
LDHA-215ENST00000537296 ECM29Q5VYK3 1845 aa13.48□□□□□ -0.25
LDHA-215ENST00000537296 TFCP2Q12800 502 aa13.48□□□□□ -0.25
LDHA-215ENST00000537296 ATP2B3Q16720 1220 aa13.48□□□□□ -0.25
LDHA-215ENST00000537296 CDC37L1Q7L3B6 337 aa13.48□□□□□ -0.25
LDHA-215ENST00000537296 KRT26Q7Z3Y9 468 aa13.48□□□□□ -0.25
LDHA-215ENST00000537296 LPIN2Q92539 896 aa13.48□□□□□ -0.25
LDHA-215ENST00000537296 ZNF408Q9H9D4 720 aa13.48□□□□□ -0.25
LDHA-215ENST00000537296 CEP126Q9P2H0 1117 aa13.48□□□□□ -0.25
LDHA-215ENST00000537296 COG6Q9Y2V7 657 aa13.48□□□□□ -0.25
LDHA-215ENST00000537296 WNT10BO00744 389 aa13.47□□□□□ -0.25
LDHA-215ENST00000537296 CENPBP07199 599 aaPredicted RBP13.47□□□□□ -0.25
LDHA-215ENST00000537296 IFIT1P09914 478 aaKnown RBP13.47□□□□□ -0.25
LDHA-215ENST00000537296 ADORA1P30542 326 aa13.47□□□□□ -0.25
LDHA-215ENST00000537296 CHAF1AQ13111 956 aaPredicted RBP13.47□□□□□ -0.25
LDHA-215ENST00000537296 CAVIN4Q5BKX8 364 aa13.47□□□□□ -0.25
LDHA-215ENST00000537296 VPS37DQ86XT2 251 aa13.47□□□□□ -0.25
LDHA-215ENST00000537296 OGFOD1Q8N543 542 aa13.47□□□□□ -0.25
LDHA-215ENST00000537296 DCPSQ96C86 337 aaKnown RBP13.47□□□□□ -0.25
LDHA-215ENST00000537296 CELF2O95319 508 aaKnown RBP13.46□□□□□ -0.25
LDHA-215ENST00000537296 SLC5A1P13866 664 aa13.46□□□□□ -0.25
LDHA-215ENST00000537296 TIMM10P62072 90 aa13.46□□□□□ -0.25
LDHA-215ENST00000537296 ATP8B2P98198 1209 aa13.46□□□□□ -0.25
LDHA-215ENST00000537296 MFSD14BQ5SR56 506 aa13.46□□□□□ -0.25
LDHA-215ENST00000537296 ZBED3Q96IU2 234 aaPredicted RBP13.46□□□□□ -0.25
LDHA-215ENST00000537296 FKBP1AP62942 108 aaKnown RBP13.45□□□□□ -0.26
LDHA-215ENST00000537296 MVPQ14764 893 aaKnown RBP13.45□□□□□ -0.26
LDHA-215ENST00000537296 PRAMEF18Q5VWM3 479 aa13.45□□□□□ -0.26
LDHA-215ENST00000537296 SSH3Q8TE77 659 aa13.45□□□□□ -0.26
LDHA-215ENST00000537296 ABT1Q9ULW3 272 aaKnown RBP13.45□□□□□ -0.26
LDHA-215ENST00000537296 CNTNAP1P78357 1384 aa13.45□□□□□ -0.26
LDHA-215ENST00000537296 FRAT2O75474 233 aaPredicted RBP13.44□□□□□ -0.26
LDHA-215ENST00000537296 PHKA1P46020 1223 aa13.44□□□□□ -0.26
LDHA-215ENST00000537296 CEP85Q6P2H3 762 aa13.44□□□□□ -0.26
LDHA-215ENST00000537296 A0A1B0GUL7 405 aa13.44□□□□□ -0.26
LDHA-215ENST00000537296 VEGFBP49765 207 aa13.44□□□□□ -0.26
LDHA-215ENST00000537296 CFAP100Q494V2 611 aa13.44□□□□□ -0.26
LDHA-215ENST00000537296 SULF1Q8IWU6 871 aa13.44□□□□□ -0.26
LDHA-215ENST00000537296 JMYQ8N9B5 988 aa13.44□□□□□ -0.26
LDHA-215ENST00000537296 PRMT6Q96LA8 375 aaPredicted RBP13.44□□□□□ -0.26
LDHA-215ENST00000537296 HDAC9Q9UKV0 1011 aa13.44□□□□□ -0.26
LDHA-215ENST00000537296 TTF2Q9UNY4 1162 aaKnown RBP13.44□□□□□ -0.26
LDHA-215ENST00000537296 RASSF10A6NK89 507 aa13.43□□□□□ -0.26
LDHA-215ENST00000537296 DLGAP5Q15398 846 aa13.43□□□□□ -0.26
LDHA-215ENST00000537296 CDCA5Q96FF9 252 aa13.43□□□□□ -0.26
LDHA-215ENST00000537296 TLL2Q9Y6L7 1015 aa13.43□□□□□ -0.26
LDHA-215ENST00000537296 PITPNM2Q9BZ72 1349 aa13.42□□□□□ -0.26
LDHA-215ENST00000537296 CLRN2A0PK11 232 aa13.42□□□□□ -0.26
LDHA-215ENST00000537296 SURF6O75683 361 aaKnown RBP13.42□□□□□ -0.26
LDHA-215ENST00000537296 G3BP1Q13283 466 aaKnown RBP eCLIP13.42□□□□□ -0.268e-16■■■■■ 27.1
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms