RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 HPS5Q9UPZ3 1129 aa11.33□□□□□ -0.6
SMAD3-203ENST00000537194 WTIPA6NIX2 430 aaPredicted RBP11.32□□□□□ -0.6
SMAD3-203ENST00000537194 F8W031 263 aaPredicted RBP11.32□□□□□ -0.6
SMAD3-203ENST00000537194 ANP32CO43423 234 aa11.32□□□□□ -0.6
SMAD3-203ENST00000537194 TNFAIP1Q13829 316 aa11.32□□□□□ -0.6
SMAD3-203ENST00000537194 SPRYD7Q5W111 196 aa11.32□□□□□ -0.6
SMAD3-203ENST00000537194 LDHAL6AQ6ZMR3 332 aa11.32□□□□□ -0.6
SMAD3-203ENST00000537194 VEZTQ9HBM0 779 aa11.32□□□□□ -0.6
SMAD3-203ENST00000537194 ECM29Q5VYK3 1845 aa11.31□□□□□ -0.6
SMAD3-203ENST00000537194 PLIN1O60240 522 aa11.31□□□□□ -0.6
SMAD3-203ENST00000537194 TAF5LO75529 589 aa11.31□□□□□ -0.6
SMAD3-203ENST00000537194 ZBTB48P10074 688 aaPredicted RBP11.31□□□□□ -0.6
SMAD3-203ENST00000537194 FKBP1AP62942 108 aaKnown RBP11.31□□□□□ -0.6
SMAD3-203ENST00000537194 CFAP100Q494V2 611 aa11.31□□□□□ -0.6
SMAD3-203ENST00000537194 C15orf52Q6ZUT6 534 aaKnown RBP11.31□□□□□ -0.6
SMAD3-203ENST00000537194 MTMR14Q8NCE2 650 aa11.31□□□□□ -0.6
SMAD3-203ENST00000537194 HELBQ8NG08 1087 aaPredicted RBP11.31□□□□□ -0.6
SMAD3-203ENST00000537194 PCDH10Q9P2E7 1040 aa11.31□□□□□ -0.6
SMAD3-203ENST00000537194 SALL2Q9Y467 1007 aaPredicted RBP11.31□□□□□ -0.6
SMAD3-203ENST00000537194 FANCIQ9NVI1 1328 aa11.31□□□□□ -0.6
SMAD3-203ENST00000537194 WDHD1O75717 1129 aaPredicted RBP11.3□□□□□ -0.6
SMAD3-203ENST00000537194 IL1R1P14778 569 aa11.3□□□□□ -0.6
SMAD3-203ENST00000537194 KLRK1P26718 216 aa11.3□□□□□ -0.6
SMAD3-203ENST00000537194 CASP7P55210 303 aa11.3□□□□□ -0.6
SMAD3-203ENST00000537194 ARHGEF6Q15052 776 aa11.3□□□□□ -0.6
SMAD3-203ENST00000537194 LDLRAD1Q5T700 205 aa11.3□□□□□ -0.6
SMAD3-203ENST00000537194 PRPF38BQ5VTL8 546 aaKnown RBP11.3□□□□□ -0.6
SMAD3-203ENST00000537194 LMBR1LQ6UX01 489 aa11.3□□□□□ -0.6
SMAD3-203ENST00000537194 VPS37DQ86XT2 251 aa11.3□□□□□ -0.6
SMAD3-203ENST00000537194 CFHR5Q9BXR6 569 aa11.3□□□□□ -0.6
SMAD3-203ENST00000537194 KIAA0100Q14667 2235 aaKnown RBP11.29□□□□□ -0.6
SMAD3-203ENST00000537194 CLRN2A0PK11 232 aa11.29□□□□□ -0.6
SMAD3-203ENST00000537194 SPDYE2BA6NHP3 402 aa11.29□□□□□ -0.6
SMAD3-203ENST00000537194 GRM8O00222 908 aa11.29□□□□□ -0.6
SMAD3-203ENST00000537194 VAMP4O75379 141 aa11.29□□□□□ -0.6
SMAD3-203ENST00000537194 FRAT2O75474 233 aaPredicted RBP11.29□□□□□ -0.6
SMAD3-203ENST00000537194 SPDYE6P0CI01 402 aa11.29□□□□□ -0.6
SMAD3-203ENST00000537194 TNNI2P48788 182 aa11.29□□□□□ -0.6
SMAD3-203ENST00000537194 EXOSC9Q06265 439 aaKnown RBP11.29□□□□□ -0.6
SMAD3-203ENST00000537194 SLC4A10Q6U841 1118 aa11.29□□□□□ -0.6
SMAD3-203ENST00000537194 IFNL1Q8IU54 200 aa11.29□□□□□ -0.6
SMAD3-203ENST00000537194 ERO1AQ96HE7 468 aa11.29□□□□□ -0.6
SMAD3-203ENST00000537194 ZBED3Q96IU2 234 aaPredicted RBP11.29□□□□□ -0.6
SMAD3-203ENST00000537194 WNK4Q96J92 1243 aa11.29□□□□□ -0.6
SMAD3-203ENST00000537194 TRIM17Q9Y577 477 aa11.29□□□□□ -0.6
SMAD3-203ENST00000537194 F6X3S4 739 aa11.28□□□□□ -0.6
SMAD3-203ENST00000537194 ALDH1L1O75891 902 aa11.28□□□□□ -0.6
SMAD3-203ENST00000537194 HIBADHP31937 336 aaKnown RBP11.28□□□□□ -0.6
SMAD3-203ENST00000537194 UBE4AQ14139 1066 aa11.28□□□□□ -0.6
SMAD3-203ENST00000537194 MAP3K11Q16584 847 aa11.28□□□□□ -0.6
SMAD3-203ENST00000537194 BEND3Q5T5X7 828 aa11.28□□□□□ -0.6
SMAD3-203ENST00000537194 INTS3Q68E01 1043 aaKnown RBP11.28□□□□□ -0.6
SMAD3-203ENST00000537194 ANKRD13AQ8IZ07 590 aa11.28□□□□□ -0.6
SMAD3-203ENST00000537194 SRCIN1Q9C0H9 1055 aa11.28□□□□□ -0.6
SMAD3-203ENST00000537194 ZNF646O15015 1829 aaPredicted RBP11.28□□□□□ -0.6
SMAD3-203ENST00000537194 FOXO4P98177 505 aa11.27□□□□□ -0.61
SMAD3-203ENST00000537194 RASA3Q14644 834 aa11.27□□□□□ -0.61
SMAD3-203ENST00000537194 MFSD14BQ5SR56 506 aa11.27□□□□□ -0.61
SMAD3-203ENST00000537194 GCC1Q96CN9 775 aa11.27□□□□□ -0.61
SMAD3-203ENST00000537194 HOOK2Q96ED9 719 aa11.27□□□□□ -0.61
SMAD3-203ENST00000537194 PRMT6Q96LA8 375 aaPredicted RBP11.27□□□□□ -0.61
SMAD3-203ENST00000537194 TMOD2Q9NZR1 351 aa11.27□□□□□ -0.61
SMAD3-203ENST00000537194 TTF2Q9UNY4 1162 aaKnown RBP11.27□□□□□ -0.61
SMAD3-203ENST00000537194 SNAP23O00161 211 aa11.26□□□□□ -0.61
SMAD3-203ENST00000537194 CAVIN4Q5BKX8 364 aa11.26□□□□□ -0.61
SMAD3-203ENST00000537194 NBPF12Q5TAG4 269 aaPredicted RBP11.26□□□□□ -0.61
SMAD3-203ENST00000537194 CERS5Q8N5B7 392 aa11.26□□□□□ -0.61
SMAD3-203ENST00000537194 TBC1D22AQ8WUA7 517 aa11.26□□□□□ -0.61
SMAD3-203ENST00000537194 ZNF594Q96JF6 807 aaPredicted RBP11.26□□□□□ -0.61
SMAD3-203ENST00000537194 CLMNQ96JQ2 1002 aa11.26□□□□□ -0.61
SMAD3-203ENST00000537194 SERPINA10Q9UK55 444 aa11.26□□□□□ -0.61
SMAD3-203ENST00000537194 JAG2Q9Y219 1238 aa11.26□□□□□ -0.61
SMAD3-203ENST00000537194 CSADQ9Y600 493 aa11.26□□□□□ -0.61
SMAD3-203ENST00000537194 MROH5Q6ZUA9 1318 aa11.26□□□□□ -0.61
SMAD3-203ENST00000537194 CCDC184Q52MB2 194 aa11.25□□□□□ -0.61
SMAD3-203ENST00000537194 EFCC1Q9HA90 598 aa11.25□□□□□ -0.61
SMAD3-203ENST00000537194 ZNF70Q9UC06 446 aaPredicted RBP11.25□□□□□ -0.61
SMAD3-203ENST00000537194 FAM205AQ6ZU69 1335 aa11.25□□□□□ -0.61
SMAD3-203ENST00000537194 A0A1B0GUL6 1792 aa11.24□□□□□ -0.61
SMAD3-203ENST00000537194 USP2O75604 605 aaPredicted RBP11.24□□□□□ -0.61
SMAD3-203ENST00000537194 GTF2A2P52657 109 aa11.24□□□□□ -0.61
SMAD3-203ENST00000537194 SP3Q02447 781 aa11.24□□□□□ -0.61
SMAD3-203ENST00000537194 SPDYE2Q495Y8 402 aa11.24□□□□□ -0.61
SMAD3-203ENST00000537194 METTL24Q5JXM2 366 aa11.24□□□□□ -0.61
SMAD3-203ENST00000537194 OTOP1Q7RTM1 612 aa11.24□□□□□ -0.61
SMAD3-203ENST00000537194 NBPF11Q86T75 865 aa11.24□□□□□ -0.61
SMAD3-203ENST00000537194 DZIP1LQ8IYY4 767 aaKnown RBP11.24□□□□□ -0.61
SMAD3-203ENST00000537194 TDRD7Q8NHU6 1098 aaKnown RBP11.24□□□□□ -0.61
SMAD3-203ENST00000537194 TMEM106CQ9BVX2 250 aa11.24□□□□□ -0.61
SMAD3-203ENST00000537194 ZFYVE28Q9HCC9 887 aa11.24□□□□□ -0.61
SMAD3-203ENST00000537194 FZD1Q9UP38 647 aa11.24□□□□□ -0.61
SMAD3-203ENST00000537194 AK9Q5TCS8 1911 aa11.24□□□□□ -0.61
SMAD3-203ENST00000537194 MAST3O60307 1309 aa11.24□□□□□ -0.61
SMAD3-203ENST00000537194 TCP10L2B9ZVM9 353 aa11.23□□□□□ -0.61
SMAD3-203ENST00000537194 IGF2BP3O00425 579 aaKnown RBP eCLIP11.23□□□□□ -0.61
SMAD3-203ENST00000537194 ZEB1P37275 1124 aaPredicted RBP11.23□□□□□ -0.61
SMAD3-203ENST00000537194 GYG1P46976 350 aa11.23□□□□□ -0.61
SMAD3-203ENST00000537194 MAP3K9P80192 1104 aa11.23□□□□□ -0.61
SMAD3-203ENST00000537194 CHAF1AQ13111 956 aaPredicted RBP11.23□□□□□ -0.61
SMAD3-203ENST00000537194 CRHR2Q13324 411 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms