RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 PODNQ7Z5L7 613 aa14.92□□□□□ -0.02
SCARB1-204ENST00000535005 BOLA2Q9H3K6 86 aa14.92□□□□□ -0.02
SCARB1-204ENST00000535005 ZNF277Q9NRM2 450 aaPredicted RBP14.92□□□□□ -0.02
SCARB1-204ENST00000535005 DENND2AQ9ULE3 1009 aa14.92□□□□□ -0.02
SCARB1-204ENST00000535005 GSPT1P15170 499 aaKnown RBP14.91□□□□□ -0.02
SCARB1-204ENST00000535005 ARHGAP27Q6ZUM4 889 aa14.91□□□□□ -0.02
SCARB1-204ENST00000535005 SPATA5Q8NB90 893 aa14.91□□□□□ -0.02
SCARB1-204ENST00000535005 BECN1Q14457 450 aa14.9□□□□□ -0.02
SCARB1-204ENST00000535005 L1TD1Q5T7N2 865 aaKnown RBP14.9□□□□□ -0.02
SCARB1-204ENST00000535005 FAM205AQ6ZU69 1335 aa14.9□□□□□ -0.02
SCARB1-204ENST00000535005 AKAP11Q9UKA4 1901 aa14.9□□□□□ -0.02
SCARB1-204ENST00000535005 G3V3G9 751 aa14.89□□□□□ -0.03
SCARB1-204ENST00000535005 GRIN3BO60391 1043 aa14.89□□□□□ -0.03
SCARB1-204ENST00000535005 ZAP70P43403 619 aa14.89□□□□□ -0.03
SCARB1-204ENST00000535005 DOK7Q18PE1 504 aa14.89□□□□□ -0.03
SCARB1-204ENST00000535005 DCAF8Q5TAQ9 597 aa14.89□□□□□ -0.03
SCARB1-204ENST00000535005 TICAM2Q86XR7 235 aa14.89□□□□□ -0.03
SCARB1-204ENST00000535005 LARGE2Q8N3Y3 721 aa14.89□□□□□ -0.03
SCARB1-204ENST00000535005 RASSF7Q02833 373 aa14.89□□□□□ -0.03
SCARB1-204ENST00000535005 SNRKQ9NRH2 765 aa14.89□□□□□ -0.03
SCARB1-204ENST00000535005 IQSEC3Q9UPP2 1182 aaPredicted RBP14.89□□□□□ -0.03
SCARB1-204ENST00000535005 ECE2O60344 883 aa14.88□□□□□ -0.03
SCARB1-204ENST00000535005 IGSF3O75054 1194 aa14.88□□□□□ -0.03
SCARB1-204ENST00000535005 FRAT2O75474 233 aaPredicted RBP14.88□□□□□ -0.03
SCARB1-204ENST00000535005 CYP2E1P05181 493 aaPredicted RBP14.88□□□□□ -0.03
SCARB1-204ENST00000535005 PRELPP51888 382 aa14.88□□□□□ -0.03
SCARB1-204ENST00000535005 GPR162Q16538 588 aa14.88□□□□□ -0.03
SCARB1-204ENST00000535005 PI16Q6UXB8 463 aa14.88□□□□□ -0.03
SCARB1-204ENST00000535005 WDR66Q8TBY9 1149 aa14.88□□□□□ -0.03
SCARB1-204ENST00000535005 EVI5LQ96CN4 794 aa14.88□□□□□ -0.03
SCARB1-204ENST00000535005 DNAJC2Q99543 621 aaKnown RBP14.88□□□□□ -0.03
SCARB1-204ENST00000535005 DBNDD1Q9H9R9 158 aa14.88□□□□□ -0.03
SCARB1-204ENST00000535005 PAG1Q9NWQ8 432 aa14.88□□□□□ -0.03
SCARB1-204ENST00000535005 GOLGB1Q14789 3259 aaKnown RBP14.88□□□□□ -0.03
SCARB1-204ENST00000535005 COL1A1P02452 1464 aaPredicted RBP14.88□□□□□ -0.03
SCARB1-204ENST00000535005 SALL1Q9NSC2 1324 aa14.88□□□□□ -0.03
SCARB1-204ENST00000535005 SDSP20132 328 aa14.87□□□□□ -0.03
SCARB1-204ENST00000535005 TTF1Q15361 905 aaPredicted RBP14.87□□□□□ -0.03
SCARB1-204ENST00000535005 NIM1KQ8IY84 436 aa14.87□□□□□ -0.03
SCARB1-204ENST00000535005 ZNRF3Q9ULT6 936 aa14.87□□□□□ -0.03
SCARB1-204ENST00000535005 COL4A5P29400 1685 aa14.87□□□□□ -0.03
SCARB1-204ENST00000535005 GOLIM4O00461 696 aa14.87□□□□□ -0.03
SCARB1-204ENST00000535005 LMNB1P20700 586 aa14.87□□□□□ -0.03
SCARB1-204ENST00000535005 CNTROBQ8N137 903 aa14.87□□□□□ -0.03
SCARB1-204ENST00000535005 JDP2Q8WYK2 163 aa14.87□□□□□ -0.03
SCARB1-204ENST00000535005 YDJCA8MPS7 323 aa14.86□□□□□ -0.03
SCARB1-204ENST00000535005 TRIM6-TRIM34B2RNG4 842 aa14.86□□□□□ -0.03
SCARB1-204ENST00000535005 FKBP1AP62942 108 aaKnown RBP14.86□□□□□ -0.03
SCARB1-204ENST00000535005 STRIP1Q5VSL9 837 aa14.86□□□□□ -0.03
SCARB1-204ENST00000535005 KBTBD3Q8NAB2 608 aa14.86□□□□□ -0.03
SCARB1-204ENST00000535005 TBC1D22AQ8WUA7 517 aa14.86□□□□□ -0.03
SCARB1-204ENST00000535005 EDC3Q96F86 508 aaKnown RBP14.86□□□□□ -0.03
SCARB1-204ENST00000535005 ANTXR1Q9H6X2 564 aa14.86□□□□□ -0.03
SCARB1-204ENST00000535005 NDUFB9Q9Y6M9 179 aa14.86□□□□□ -0.03
SCARB1-204ENST00000535005 MAP4K4O95819 1239 aaPredicted RBP14.85□□□□□ -0.03
SCARB1-204ENST00000535005 GTF2IP78347 998 aa14.85□□□□□ -0.03
SCARB1-204ENST00000535005 CHAF1AQ13111 956 aaPredicted RBP14.85□□□□□ -0.03
SCARB1-204ENST00000535005 TTLL5Q6EMB2 1281 aa14.85□□□□□ -0.03
SCARB1-204ENST00000535005 ZGPATQ8N5A5 531 aaKnown RBP14.85□□□□□ -0.03
SCARB1-204ENST00000535005 PIH1D3Q9NQM4 214 aaKnown RBP14.85□□□□□ -0.03
SCARB1-204ENST00000535005 CHD4Q14839 1912 aa14.85□□□□□ -0.03
SCARB1-204ENST00000535005 USP17L3A6NCW0 530 aa14.85□□□□□ -0.03
SCARB1-204ENST00000535005 USP17L4A6NCW7 530 aa14.85□□□□□ -0.03
SCARB1-204ENST00000535005 USP17L1Q7RTZ2 530 aa14.85□□□□□ -0.03
SCARB1-204ENST00000535005 RILPL2Q969X0 211 aa14.85□□□□□ -0.03
SCARB1-204ENST00000535005 SUGT1Q9Y2Z0 365 aa14.85□□□□□ -0.03
SCARB1-204ENST00000535005 RFX7Q2KHR2 1363 aa14.84□□□□□ -0.03
SCARB1-204ENST00000535005 FZD9O00144 591 aa14.84□□□□□ -0.03
SCARB1-204ENST00000535005 DACT2Q5SW24 774 aa14.84□□□□□ -0.03
SCARB1-204ENST00000535005 SPTY2D1Q68D10 685 aaPredicted RBP14.84□□□□□ -0.03
SCARB1-204ENST00000535005 TMED8Q6PL24 325 aaPredicted RBP14.84□□□□□ -0.03
SCARB1-204ENST00000535005 TBC1D9Q6ZT07 1266 aa14.84□□□□□ -0.03
SCARB1-204ENST00000535005 KCNQ5Q9NR82 932 aa14.84□□□□□ -0.03
SCARB1-204ENST00000535005 MYH13Q9UKX3 1938 aa14.83□□□□□ -0.04
SCARB1-204ENST00000535005 VIL1P09327 827 aaKnown RBP14.82□□□□□ -0.04
SCARB1-204ENST00000535005 CXCL9Q07325 125 aa14.82□□□□□ -0.04
SCARB1-204ENST00000535005 LRRFIP1Q32MZ4 808 aaKnown RBP14.82□□□□□ -0.04
SCARB1-204ENST00000535005 FSD1Q9BTV5 496 aa14.82□□□□□ -0.04
SCARB1-204ENST00000535005 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.82□□□□□ -0.04
SCARB1-204ENST00000535005 SCN9AQ15858 1988 aa14.82□□□□□ -0.04
SCARB1-204ENST00000535005 SBF1O95248 1867 aa14.82□□□□□ -0.04
SCARB1-204ENST00000535005 MAP3K12Q12852 859 aa14.82□□□□□ -0.04
SCARB1-204ENST00000535005 MFSD14BQ5SR56 506 aa14.82□□□□□ -0.04
SCARB1-204ENST00000535005 CERS5Q8N5B7 392 aa14.82□□□□□ -0.04
SCARB1-204ENST00000535005 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.82□□□□□ -0.041e-8■■■■□ 21.3
SCARB1-204ENST00000535005 LRP2BPQ9P2M1 347 aa14.82□□□□□ -0.04
SCARB1-204ENST00000535005 ABCF2Q9UG63 623 aa14.82□□□□□ -0.04
SCARB1-204ENST00000535005 JAG2Q9Y219 1238 aa14.82□□□□□ -0.04
SCARB1-204ENST00000535005 DICER1Q9UPY3 1922 aaKnown RBP14.81□□□□□ -0.04
SCARB1-204ENST00000535005 HIP1O00291 1037 aa14.81□□□□□ -0.04
SCARB1-204ENST00000535005 ZFYP08048 801 aaPredicted RBP14.81□□□□□ -0.04
SCARB1-204ENST00000535005 SLC4A3P48751 1232 aa14.81□□□□□ -0.04
SCARB1-204ENST00000535005 TNIP1Q15025 636 aa14.81□□□□□ -0.04
SCARB1-204ENST00000535005 CIAPIN1Q6FI81 312 aa14.81□□□□□ -0.04
SCARB1-204ENST00000535005 ZSCAN25Q6NSZ9 544 aa14.81□□□□□ -0.04
SCARB1-204ENST00000535005 MYO3BQ8WXR4 1341 aa14.81□□□□□ -0.04
SCARB1-204ENST00000535005 PSME4Q14997 1843 aa14.81□□□□□ -0.04
SCARB1-204ENST00000535005 CDC45O75419 566 aa14.8□□□□□ -0.04
SCARB1-204ENST00000535005 IDH1O75874 414 aaKnown RBP14.8□□□□□ -0.04
SCARB1-204ENST00000535005 RAD17O75943 681 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms