RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	USP21	Q9UK80	565 aa		9.27	□□□□□ -0.93
PICALM-223	ENST00000534412	KCNH4	Q9UQ05	1017 aa		9.27	□□□□□ -0.93
PICALM-223	ENST00000534412	SPHKAP	Q2M3C7	1700 aa		9.26	□□□□□ -0.93
PICALM-223	ENST00000534412	ELOA3C	A0A087WX78	387 aa	Predicted RBP	9.26	□□□□□ -0.93
PICALM-223	ENST00000534412	ELOA3D	A6NLF2	546 aa	Predicted RBP	9.26	□□□□□ -0.93
PICALM-223	ENST00000534412	MSTN	O14793	375 aa		9.26	□□□□□ -0.93
PICALM-223	ENST00000534412	IGFBP4	P22692	258 aa		9.26	□□□□□ -0.93
PICALM-223	ENST00000534412	DGKG	P49619	791 aa		9.26	□□□□□ -0.93
PICALM-223	ENST00000534412	SPEM2	Q0P670	501 aa		9.26	□□□□□ -0.93
PICALM-223	ENST00000534412	ELOA3B	Q3SY89	546 aa		9.26	□□□□□ -0.93
PICALM-223	ENST00000534412	LINC00114	Q6XXX2	140 aa		9.26	□□□□□ -0.93
PICALM-223	ENST00000534412	ZNF280C	Q8ND82	737 aa		9.26	□□□□□ -0.93
PICALM-223	ENST00000534412	ELOA3	Q8NG57	546 aa		9.26	□□□□□ -0.93
PICALM-223	ENST00000534412	FAM200A	Q8TCP9	573 aa		9.26	□□□□□ -0.93
PICALM-223	ENST00000534412	VTI1A	Q96AJ9	217 aa		9.26	□□□□□ -0.93
PICALM-223	ENST00000534412	BCL9L	Q86UU0	1499 aa		9.26	□□□□□ -0.93
PICALM-223	ENST00000534412	ROBO2	Q9HCK4	1378 aa		9.25	□□□□□ -0.93
PICALM-223	ENST00000534412	SIN3B	O75182	1162 aa		9.25	□□□□□ -0.93
PICALM-223	ENST00000534412	LGR5	O75473	907 aa		9.25	□□□□□ -0.93
PICALM-223	ENST00000534412	RTN1	Q16799	776 aa		9.25	□□□□□ -0.93
PICALM-223	ENST00000534412	CFAP70	Q5T0N1	1121 aa		9.25	□□□□□ -0.93
PICALM-223	ENST00000534412	PXDN	Q92626	1479 aa		9.24	□□□□□ -0.93
PICALM-223	ENST00000534412	TYRO3	Q06418	890 aa		9.24	□□□□□ -0.93
PICALM-223	ENST00000534412	BTLA	Q7Z6A9	289 aa		9.24	□□□□□ -0.93
PICALM-223	ENST00000534412	ORAI2	Q96SN7	254 aa		9.24	□□□□□ -0.93
PICALM-223	ENST00000534412	CDC42BPG	Q6DT37	1551 aa		9.24	□□□□□ -0.93
PICALM-223	ENST00000534412	CLTCL1	P53675	1640 aa		9.23	□□□□□ -0.93
PICALM-223	ENST00000534412	HFM1	A2PYH4	1435 aa		9.23	□□□□□ -0.93
PICALM-223	ENST00000534412	HOXB4	P17483	251 aa	Predicted RBP	9.23	□□□□□ -0.93
PICALM-223	ENST00000534412	KCNQ4	P56696	695 aa		9.23	□□□□□ -0.93
PICALM-223	ENST00000534412	CDCA8	Q53HL2	280 aa		9.23	□□□□□ -0.93
PICALM-223	ENST00000534412	ZNF326	Q5BKZ1	582 aa	Known RBP	9.23	□□□□□ -0.93
PICALM-223	ENST00000534412	SLC30A3	Q99726	388 aa		9.23	□□□□□ -0.93
PICALM-223	ENST00000534412	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	9.23	□□□□□ -0.93	2e-6	■■■■■ 36.6
PICALM-223	ENST00000534412	SUV39H2	Q9H5I1	410 aa		9.22	□□□□□ -0.93
PICALM-223	ENST00000534412	NPHP3	Q7Z494	1330 aa		9.22	□□□□□ -0.93
PICALM-223	ENST00000534412	BLM	P54132	1417 aa	Predicted RBP	9.22	□□□□□ -0.93
PICALM-223	ENST00000534412	ADARB2-AS1	A8MUL3	147 aa		9.21	□□□□□ -0.94
PICALM-223	ENST00000534412	COL8A1	P27658	744 aa		9.21	□□□□□ -0.94
PICALM-223	ENST00000534412	RAB44	Q7Z6P3	723 aa	Predicted RBP	9.21	□□□□□ -0.94
PICALM-223	ENST00000534412	TNFRSF25	Q93038	417 aa		9.21	□□□□□ -0.94
PICALM-223	ENST00000534412	ARX	Q96QS3	562 aa		9.21	□□□□□ -0.94
PICALM-223	ENST00000534412	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	9.21	□□□□□ -0.94
PICALM-223	ENST00000534412	SLIT2	O94813	1529 aa		9.21	□□□□□ -0.94
PICALM-223	ENST00000534412	KRBA1	A5PL33	1030 aa		9.2	□□□□□ -0.94
PICALM-223	ENST00000534412	SPDYE3	A6NKU9	549 aa		9.2	□□□□□ -0.94
PICALM-223	ENST00000534412	TGFBR3L	H3BV60	316 aa		9.2	□□□□□ -0.94
PICALM-223	ENST00000534412	FOXO3	O43524	673 aa		9.2	□□□□□ -0.94
PICALM-223	ENST00000534412	EPB42	P16452	691 aa		9.2	□□□□□ -0.94
PICALM-223	ENST00000534412	IER5	Q5VY09	327 aa		9.2	□□□□□ -0.94
PICALM-223	ENST00000534412	BHMT	Q93088	406 aa		9.2	□□□□□ -0.94
PICALM-223	ENST00000534412	PNMA5	Q96PV4	448 aa		9.2	□□□□□ -0.94
PICALM-223	ENST00000534412	SPOCK3	Q9BQ16	436 aa		9.2	□□□□□ -0.94
PICALM-223	ENST00000534412	GLI3	P10071	1580 aa		9.2	□□□□□ -0.94
PICALM-223	ENST00000534412	LRP5	O75197	1615 aa		9.2	□□□□□ -0.94
PICALM-223	ENST00000534412	EFCC1	Q9HA90	598 aa		9.19	□□□□□ -0.94
PICALM-223	ENST00000534412	NOVA2	Q9UNW9	492 aa	Known RBP	9.19	□□□□□ -0.94
PICALM-223	ENST00000534412	TECPR2	O15040	1411 aa		9.19	□□□□□ -0.94
PICALM-223	ENST00000534412	RALGAPB	Q86X10	1494 aa		9.19	□□□□□ -0.94
PICALM-223	ENST00000534412	WEE1	P30291	646 aa		9.18	□□□□□ -0.94
PICALM-223	ENST00000534412	ADH7	P40394	386 aa		9.18	□□□□□ -0.94
PICALM-223	ENST00000534412	TBC1D8B	Q0IIM8	1120 aa		9.18	□□□□□ -0.94
PICALM-223	ENST00000534412	ZMYND15	Q9H091	742 aa		9.18	□□□□□ -0.94
PICALM-223	ENST00000534412	MARF1	Q9Y4F3	1742 aa	Known RBP	9.18	□□□□□ -0.94
PICALM-223	ENST00000534412	LRPPRC	P42704	1394 aa	Known RBP	9.17	□□□□□ -0.94
PICALM-223	ENST00000534412	RPGRIP1L	Q68CZ1	1315 aa		9.17	□□□□□ -0.94
PICALM-223	ENST00000534412	SUZ12	Q15022	739 aa	Known RBP	9.17	□□□□□ -0.94
PICALM-223	ENST00000534412	UNC5CL	Q8IV45	518 aa		9.17	□□□□□ -0.94
PICALM-223	ENST00000534412	PLVAP	Q9BX97	442 aa		9.17	□□□□□ -0.94
PICALM-223	ENST00000534412	UBE2O	Q9C0C9	1292 aa	Known RBP	9.17	□□□□□ -0.94
PICALM-223	ENST00000534412	IGFLR1	Q9H665	355 aa		9.17	□□□□□ -0.94
PICALM-223	ENST00000534412		M0R082	166 aa		9.16	□□□□□ -0.94
PICALM-223	ENST00000534412	DGKZ	Q13574	1117 aa		9.16	□□□□□ -0.94
PICALM-223	ENST00000534412	ZNF417	Q8TAU3	575 aa		9.16	□□□□□ -0.94
PICALM-223	ENST00000534412	ZNF587	Q96SQ5	575 aa	Predicted RBP	9.16	□□□□□ -0.94
PICALM-223	ENST00000534412	KLK14	Q9P0G3	267 aa		9.16	□□□□□ -0.94
PICALM-223	ENST00000534412	USP32	Q8NFA0	1604 aa		9.16	□□□□□ -0.94
PICALM-223	ENST00000534412	CCDC144A	A2RUR9	1427 aa		9.15	□□□□□ -0.94
PICALM-223	ENST00000534412	NAIP	Q13075	1403 aa		9.15	□□□□□ -0.94
PICALM-223	ENST00000534412	SPATA31A3	Q5VYP0	1347 aa		9.15	□□□□□ -0.94
PICALM-223	ENST00000534412	ITGB2	P05107	769 aa		9.15	□□□□□ -0.94
PICALM-223	ENST00000534412	CCIN	Q13939	588 aa		9.15	□□□□□ -0.94
PICALM-223	ENST00000534412	SWI5	Q1ZZU3	235 aa		9.15	□□□□□ -0.94
PICALM-223	ENST00000534412	C11orf91	Q3C1V1	193 aa		9.15	□□□□□ -0.94
PICALM-223	ENST00000534412	PRRT3	Q5FWE3	981 aa		9.15	□□□□□ -0.94
PICALM-223	ENST00000534412	TRIM11	Q96F44	468 aa		9.15	□□□□□ -0.94
PICALM-223	ENST00000534412	MDFI	Q99750	246 aa		9.15	□□□□□ -0.94
PICALM-223	ENST00000534412	KIF1B	O60333	1816 aa		9.15	□□□□□ -0.95
PICALM-223	ENST00000534412	ACIN1	Q9UKV3	1341 aa	Known RBP	9.14	□□□□□ -0.95
PICALM-223	ENST00000534412	IDH3A	P50213	366 aa		9.14	□□□□□ -0.95
PICALM-223	ENST00000534412	XPC	Q01831	940 aa	Predicted RBP	9.14	□□□□□ -0.95
PICALM-223	ENST00000534412	DEFB132	Q7Z7B7	95 aa		9.14	□□□□□ -0.95
PICALM-223	ENST00000534412	CCDC97	Q96F63	343 aa	Predicted RBP	9.14	□□□□□ -0.95
PICALM-223	ENST00000534412	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	9.14	□□□□□ -0.95
PICALM-223	ENST00000534412	PROC	P04070	461 aa		9.13	□□□□□ -0.95
PICALM-223	ENST00000534412	SPATA31C1	P0DKV0	1188 aa		9.13	□□□□□ -0.95
PICALM-223	ENST00000534412	ITGAE	P38570	1179 aa		9.13	□□□□□ -0.95
PICALM-223	ENST00000534412	ARSD	P51689	593 aa		9.13	□□□□□ -0.95
PICALM-223	ENST00000534412	ELOA	Q14241	798 aa	Known RBP	9.13	□□□□□ -0.95
PICALM-223	ENST00000534412	VPS72	Q15906	364 aa		9.13	□□□□□ -0.95

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