RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 MBD4O95243 580 aa18.7■□□□□ 0.58
ATP2C1-224ENST00000533801 HMGB1P09429 215 aaKnown RBP18.7■□□□□ 0.58
ATP2C1-224ENST00000533801 PDIA3P30101 505 aaKnown RBP18.7■□□□□ 0.58
ATP2C1-224ENST00000533801 AIFM3Q96NN9 605 aa18.7■□□□□ 0.58
ATP2C1-224ENST00000533801 PPP1R9BQ96SB3 815 aa18.7■□□□□ 0.58
ATP2C1-224ENST00000533801 GPR108Q9NPR9 543 aa18.7■□□□□ 0.58
ATP2C1-224ENST00000533801 ORC3Q9UBD5 711 aaPredicted RBP18.7■□□□□ 0.58
ATP2C1-224ENST00000533801 PRKAB2O43741 272 aa18.7■□□□□ 0.58
ATP2C1-224ENST00000533801 TDO2P48775 406 aa18.7■□□□□ 0.58
ATP2C1-224ENST00000533801 RAI14Q9P0K7 980 aa18.7■□□□□ 0.58
ATP2C1-224ENST00000533801 PHKBQ93100 1093 aa18.69■□□□□ 0.58
ATP2C1-224ENST00000533801 SCAND2PQ9GZW5 306 aaPredicted RBP18.69■□□□□ 0.58
ATP2C1-224ENST00000533801 KCPQ6ZWJ8 1503 aa18.69■□□□□ 0.58
ATP2C1-224ENST00000533801 CMTR1Q8N1G2 835 aaKnown RBP18.69■□□□□ 0.58
ATP2C1-224ENST00000533801 IL17RAQ96F46 866 aa18.69■□□□□ 0.58
ATP2C1-224ENST00000533801 CCDC192P0DO97 292 aa18.69■□□□□ 0.58
ATP2C1-224ENST00000533801 SLC5A1P13866 664 aa18.69■□□□□ 0.58
ATP2C1-224ENST00000533801 MCM5P33992 734 aa18.69■□□□□ 0.58
ATP2C1-224ENST00000533801 VSIG10Q8N0Z9 540 aa18.69■□□□□ 0.58
ATP2C1-224ENST00000533801 NCOA7Q8NI08 942 aa18.69■□□□□ 0.58
ATP2C1-224ENST00000533801 NAPBQ9H115 298 aa18.69■□□□□ 0.58
ATP2C1-224ENST00000533801 N4BP2Q86UW6 1770 aaPredicted RBP18.69■□□□□ 0.58
ATP2C1-224ENST00000533801 MRC1P22897 1456 aa18.68■□□□□ 0.58
ATP2C1-224ENST00000533801 MTMR7Q9Y216 660 aa18.68■□□□□ 0.58
ATP2C1-224ENST00000533801 CTDNEP1O95476 244 aa18.68■□□□□ 0.58
ATP2C1-224ENST00000533801 CSF1RP07333 972 aa18.68■□□□□ 0.58
ATP2C1-224ENST00000533801 PDE6AP16499 860 aa18.68■□□□□ 0.58
ATP2C1-224ENST00000533801 ADD1P35611 737 aaKnown RBP18.68■□□□□ 0.58
ATP2C1-224ENST00000533801 GYG1P46976 350 aa18.68■□□□□ 0.58
ATP2C1-224ENST00000533801 NUP133Q8WUM0 1156 aa18.68■□□□□ 0.58
ATP2C1-224ENST00000533801 PIBF1Q8WXW3 757 aa18.68■□□□□ 0.58
ATP2C1-224ENST00000533801 C8orf76Q96K31 380 aa18.68■□□□□ 0.58
ATP2C1-224ENST00000533801 CHAF1AQ13111 956 aaPredicted RBP18.68■□□□□ 0.58
ATP2C1-224ENST00000533801 ISM2Q6H9L7 571 aa18.68■□□□□ 0.58
ATP2C1-224ENST00000533801 SASS6Q6UVJ0 657 aa18.68■□□□□ 0.58
ATP2C1-224ENST00000533801 SENP2Q9HC62 589 aa18.68■□□□□ 0.58
ATP2C1-224ENST00000533801 NKX2-3Q8TAU0 364 aa18.67■□□□□ 0.58
ATP2C1-224ENST00000533801 USP28Q96RU2 1077 aa18.67■□□□□ 0.58
ATP2C1-224ENST00000533801 KIF3AQ9Y496 699 aa18.67■□□□□ 0.58
ATP2C1-224ENST00000533801 IL6STP40189 918 aaPredicted RBP18.67■□□□□ 0.58
ATP2C1-224ENST00000533801 RASGRF1Q13972 1273 aa18.67■□□□□ 0.58
ATP2C1-224ENST00000533801 ANO6Q4KMQ2 910 aa18.67■□□□□ 0.58
ATP2C1-224ENST00000533801 DNAJC25Q9H1X3 360 aa18.67■□□□□ 0.58
ATP2C1-224ENST00000533801 PFKFB2O60825 505 aa18.67■□□□□ 0.58
ATP2C1-224ENST00000533801 PUM3Q15397 648 aaKnown RBP18.67■□□□□ 0.58
ATP2C1-224ENST00000533801 SPATA5Q8NB90 893 aa18.66■□□□□ 0.58
ATP2C1-224ENST00000533801 PGBD1Q96JS3 809 aa18.66■□□□□ 0.58
ATP2C1-224ENST00000533801 ZFYP08048 801 aaPredicted RBP18.66■□□□□ 0.58
ATP2C1-224ENST00000533801 TRIM28Q13263 835 aaKnown RBP18.66■□□□□ 0.58
ATP2C1-224ENST00000533801 STK38Q15208 465 aa18.66■□□□□ 0.58
ATP2C1-224ENST00000533801 CCAR1Q8IX12 1150 aaKnown RBP18.66■□□□□ 0.58
ATP2C1-224ENST00000533801 CCDC39Q9UFE4 941 aa18.66■□□□□ 0.58
ATP2C1-224ENST00000533801 TBC1D10CQ8IV04 446 aa18.65■□□□□ 0.58
ATP2C1-224ENST00000533801 PALLDQ8WX93 1383 aa18.65■□□□□ 0.58
ATP2C1-224ENST00000533801 UBE2Q2LH0YL09 131 aa18.65■□□□□ 0.58
ATP2C1-224ENST00000533801 CCDC73Q6ZRK6 1079 aa18.65■□□□□ 0.58
ATP2C1-224ENST00000533801 MARCKSP29966 332 aaPredicted RBP18.65■□□□□ 0.58
ATP2C1-224ENST00000533801 TYRO3Q06418 890 aa18.65■□□□□ 0.58
ATP2C1-224ENST00000533801 MAP3K12Q12852 859 aa18.65■□□□□ 0.58
ATP2C1-224ENST00000533801 TSGA10IPQ3SY00 556 aa18.65■□□□□ 0.58
ATP2C1-224ENST00000533801 CCDC152Q4G0S7 254 aa18.65■□□□□ 0.58
ATP2C1-224ENST00000533801 SDF4Q9BRK5 362 aa18.65■□□□□ 0.58
ATP2C1-224ENST00000533801 SRP68Q9UHB9 627 aaKnown RBP18.65■□□□□ 0.58
ATP2C1-224ENST00000533801 BIN1O00499 593 aa18.64■□□□□ 0.58
ATP2C1-224ENST00000533801 SDR42E1Q8WUS8 393 aa18.64■□□□□ 0.58
ATP2C1-224ENST00000533801 RESTQ13127 1097 aa18.64■□□□□ 0.57
ATP2C1-224ENST00000533801 ZRSR1Q15695 479 aaKnown RBP18.64■□□□□ 0.57
ATP2C1-224ENST00000533801 ZSCAN25Q6NSZ9 544 aa18.64■□□□□ 0.57
ATP2C1-224ENST00000533801 INTS5Q6P9B9 1019 aaKnown RBP18.64■□□□□ 0.57
ATP2C1-224ENST00000533801 LPIN2Q92539 896 aa18.64■□□□□ 0.57
ATP2C1-224ENST00000533801 CFAP45Q9UL16 551 aa18.64■□□□□ 0.57
ATP2C1-224ENST00000533801 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.64■□□□□ 0.57
ATP2C1-224ENST00000533801 SLC4A4Q9Y6R1 1079 aa18.64■□□□□ 0.57
ATP2C1-224ENST00000533801 BCL9O00512 1426 aa18.64■□□□□ 0.57
ATP2C1-224ENST00000533801 A0A1B0GVL5 298 aa18.64■□□□□ 0.57
ATP2C1-224ENST00000533801 IFIT3O14879 490 aaKnown RBP18.64■□□□□ 0.57
ATP2C1-224ENST00000533801 PRDM1O75626 825 aa18.64■□□□□ 0.57
ATP2C1-224ENST00000533801 ADD2P35612 726 aa18.64■□□□□ 0.57
ATP2C1-224ENST00000533801 FSIP1Q8NA03 581 aa18.64■□□□□ 0.57
ATP2C1-224ENST00000533801 TRIM5Q9C035 493 aa18.64■□□□□ 0.57
ATP2C1-224ENST00000533801 UBAP1LF5GYI3 381 aa18.63■□□□□ 0.57
ATP2C1-224ENST00000533801 ERFEQ4G0M1 354 aa18.63■□□□□ 0.57
ATP2C1-224ENST00000533801 TMEM67Q5HYA8 995 aa18.63■□□□□ 0.57
ATP2C1-224ENST00000533801 TMEM87AQ8NBN3 555 aa18.63■□□□□ 0.57
ATP2C1-224ENST00000533801 HMGN5P82970 282 aaKnown RBP18.63■□□□□ 0.57
ATP2C1-224ENST00000533801 EXOSC10Q01780 885 aaKnown RBP18.63■□□□□ 0.57
ATP2C1-224ENST00000533801 KIAA2012Q0VF49 1180 aa18.63■□□□□ 0.57
ATP2C1-224ENST00000533801 SYNE3Q6ZMZ3 975 aa18.63■□□□□ 0.57
ATP2C1-224ENST00000533801 TFCP2L1Q9NZI6 479 aa18.63■□□□□ 0.57
ATP2C1-224ENST00000533801 SMIM22K7EJ46 135 aa18.63■□□□□ 0.57
ATP2C1-224ENST00000533801 FOXP2O15409 715 aa18.63■□□□□ 0.57
ATP2C1-224ENST00000533801 METAP2P50579 478 aaKnown RBP eCLIP18.63■□□□□ 0.57
ATP2C1-224ENST00000533801 hCG_1642624A0A1W2PR95 340 aa18.62■□□□□ 0.57
ATP2C1-224ENST00000533801 LETM1O95202 739 aaPredicted RBP18.62■□□□□ 0.57
ATP2C1-224ENST00000533801 CYP7A1P22680 504 aa18.62■□□□□ 0.57
ATP2C1-224ENST00000533801 EIF5P55010 431 aaKnown RBP18.62■□□□□ 0.57
ATP2C1-224ENST00000533801 CHRNDQ07001 517 aa18.62■□□□□ 0.57
ATP2C1-224ENST00000533801 CYB5R4Q7L1T6 521 aa18.62■□□□□ 0.57
ATP2C1-224ENST00000533801 KINO60870 393 aaKnown RBP18.62■□□□□ 0.57
ATP2C1-224ENST00000533801 C3orf67Q6ZVT6 689 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms