RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 TFCP2Q12800 502 aa9.21□□□□□ -0.93
CTNND1-234ENST00000532844 PRPF4BQ13523 1007 aaKnown RBP9.21□□□□□ -0.93
CTNND1-234ENST00000532844 APBB1IPQ7Z5R6 666 aaPredicted RBP9.21□□□□□ -0.93
CTNND1-234ENST00000532844 EHBP1Q8NDI1 1231 aa9.21□□□□□ -0.93
CTNND1-234ENST00000532844 WDR7Q9Y4E6 1490 aa9.21□□□□□ -0.94
CTNND1-234ENST00000532844 MYO1BO43795 1136 aa9.21□□□□□ -0.94
CTNND1-234ENST00000532844 CETN1Q12798 172 aa9.21□□□□□ -0.94
CTNND1-234ENST00000532844 HEATR3Q7Z4Q2 680 aa9.21□□□□□ -0.94
CTNND1-234ENST00000532844 DDX12PQ92771 950 aa9.21□□□□□ -0.94
CTNND1-234ENST00000532844 CCDC121Q6ZUS5 278 aa9.21□□□□□ -0.94
CTNND1-234ENST00000532844 CCDC155Q8N6L0 562 aa9.21□□□□□ -0.94
CTNND1-234ENST00000532844 ANKS4BQ8N8V4 417 aa9.21□□□□□ -0.94
CTNND1-234ENST00000532844 PPFIBP2Q8ND30 876 aa9.21□□□□□ -0.94
CTNND1-234ENST00000532844 MKRN1Q9UHC7 482 aaKnown RBP9.21□□□□□ -0.94
CTNND1-234ENST00000532844 STX8Q9UNK0 236 aa9.21□□□□□ -0.94
CTNND1-234ENST00000532844 ZKSCAN5Q9Y2L8 839 aa9.21□□□□□ -0.94
CTNND1-234ENST00000532844 TRMT1LQ7Z2T5 733 aaKnown RBP9.21□□□□□ -0.94
CTNND1-234ENST00000532844 SYCP3Q8IZU3 236 aa9.21□□□□□ -0.94
CTNND1-234ENST00000532844 GBP7Q8N8V2 638 aaPredicted RBP9.21□□□□□ -0.94
CTNND1-234ENST00000532844 SPTLC2O15270 562 aa9.2□□□□□ -0.94
CTNND1-234ENST00000532844 SYT1P21579 422 aa9.2□□□□□ -0.94
CTNND1-234ENST00000532844 NBPF6Q5VWK0 638 aa9.2□□□□□ -0.94
CTNND1-234ENST00000532844 STXBP4Q6ZWJ1 553 aa9.2□□□□□ -0.94
CTNND1-234ENST00000532844 NBPF5PQ86XG9 351 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-234ENST00000532844 NBPF4Q96M43 638 aa9.2□□□□□ -0.94
CTNND1-234ENST00000532844 TTC12Q9H892 705 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-234ENST00000532844 MMRN2Q9H8L6 949 aa9.2□□□□□ -0.94
CTNND1-234ENST00000532844 DNAI1Q9UI46 699 aa9.2□□□□□ -0.94
CTNND1-234ENST00000532844 NBPF7P0C2Y1 421 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-234ENST00000532844 IKBKGQ9Y6K9 419 aa9.2□□□□□ -0.94
CTNND1-234ENST00000532844 PZPP20742 1482 aa9.2□□□□□ -0.94
CTNND1-234ENST00000532844 MAST1Q9Y2H9 1570 aa9.2□□□□□ -0.94
CTNND1-234ENST00000532844 SOS1Q07889 1333 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-234ENST00000532844 CTNNA2P26232 953 aa9.2□□□□□ -0.94
CTNND1-234ENST00000532844 RFC4P35249 363 aa9.2□□□□□ -0.94
CTNND1-234ENST00000532844 LINS1Q8NG48 757 aa9.2□□□□□ -0.94
CTNND1-234ENST00000532844 DHX58Q96C10 678 aa9.2□□□□□ -0.94
CTNND1-234ENST00000532844 GTPBP4Q9BZE4 634 aaKnown RBP9.2□□□□□ -0.94
CTNND1-234ENST00000532844 BICC1Q9H694 974 aaKnown RBP9.2□□□□□ -0.94
CTNND1-234ENST00000532844 OTUD6BQ8N6M0 293 aa9.2□□□□□ -0.94
CTNND1-234ENST00000532844 ATRIPQ8WXE1 791 aa9.2□□□□□ -0.94
CTNND1-234ENST00000532844 CABP5Q9NP86 173 aa9.2□□□□□ -0.94
CTNND1-234ENST00000532844 A0A1W2PRG0 241 aa9.19□□□□□ -0.94
CTNND1-234ENST00000532844 PTPDC1A2A3K4 754 aa9.19□□□□□ -0.94
CTNND1-234ENST00000532844 ZBTB7BO15156 539 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-234ENST00000532844 TBCAO75347 108 aaKnown RBP9.19□□□□□ -0.94
CTNND1-234ENST00000532844 ATP6V1AP38606 617 aa9.19□□□□□ -0.94
CTNND1-234ENST00000532844 MAGEB6P1A0A0J9YX57 407 aa9.19□□□□□ -0.94
CTNND1-234ENST00000532844 ST5P78524 1137 aa9.19□□□□□ -0.94
CTNND1-234ENST00000532844 CKAP4Q07065 602 aaKnown RBP9.19□□□□□ -0.94
CTNND1-234ENST00000532844 CFAP58Q5T655 872 aa9.19□□□□□ -0.94
CTNND1-234ENST00000532844 NAA16Q6N069 864 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-234ENST00000532844 SBNO2Q9Y2G9 1366 aa9.19□□□□□ -0.94
CTNND1-234ENST00000532844 EBAG9O00559 213 aa9.19□□□□□ -0.94
CTNND1-234ENST00000532844 CADPS2Q86UW7 1296 aa9.19□□□□□ -0.94
CTNND1-234ENST00000532844 NFATC2IPQ8NCF5 419 aa9.19□□□□□ -0.94
CTNND1-234ENST00000532844 CCDC110Q8TBZ0 833 aa9.19□□□□□ -0.94
CTNND1-234ENST00000532844 FERMT2Q96AC1 680 aa9.19□□□□□ -0.94
CTNND1-234ENST00000532844 INTS4Q96HW7 963 aaKnown RBP9.19□□□□□ -0.94
CTNND1-234ENST00000532844 EYA1Q99502 592 aa9.19□□□□□ -0.94
CTNND1-234ENST00000532844 SAMM50Q9Y512 469 aa9.19□□□□□ -0.94
CTNND1-234ENST00000532844 RTL9Q8NET4 1388 aa9.19□□□□□ -0.94
CTNND1-234ENST00000532844 AKR1B10O60218 316 aa9.19□□□□□ -0.94
CTNND1-234ENST00000532844 DNAJC21Q5F1R6 531 aaKnown RBP9.19□□□□□ -0.94
CTNND1-234ENST00000532844 CCDC174Q6PII3 467 aa9.19□□□□□ -0.94
CTNND1-234ENST00000532844 ACSBG1Q96GR2 724 aa9.19□□□□□ -0.94
CTNND1-234ENST00000532844 RNF216Q9NWF9 866 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-234ENST00000532844 CYLC1P35663 651 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-234ENST00000532844 TTC14Q96N46 770 aa9.19□□□□□ -0.94
CTNND1-234ENST00000532844 SRRTQ9BXP5 876 aaKnown RBP9.19□□□□□ -0.94
CTNND1-234ENST00000532844 RAD50Q92878 1312 aa9.19□□□□□ -0.94
CTNND1-234ENST00000532844 CASQ2O14958 399 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-234ENST00000532844 UTP14AQ9BVJ6 771 aaKnown RBP9.18□□□□□ -0.94
CTNND1-234ENST00000532844 RASSF4Q9H2L5 321 aa9.18□□□□□ -0.94
CTNND1-234ENST00000532844 CTAGE15A4D2H0 777 aa9.18□□□□□ -0.94
CTNND1-234ENST00000532844 PER1O15534 1290 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-234ENST00000532844 CTAGE8P0CG41 777 aa9.18□□□□□ -0.94
CTNND1-234ENST00000532844 PTGS1P23219 599 aa9.18□□□□□ -0.94
CTNND1-234ENST00000532844 KRT2P35908 639 aa9.18□□□□□ -0.94
CTNND1-234ENST00000532844 PSMC4P43686 418 aa9.18□□□□□ -0.94
CTNND1-234ENST00000532844 IFI16Q16666 785 aaKnown RBP9.18□□□□□ -0.94
CTNND1-234ENST00000532844 CTAGE6Q86UF2 777 aa9.18□□□□□ -0.94
CTNND1-234ENST00000532844 CTAGE4Q8IX94 777 aa9.18□□□□□ -0.94
CTNND1-234ENST00000532844 FAM114A2Q9NRY5 505 aa9.18□□□□□ -0.94
CTNND1-234ENST00000532844 LMOD1P29536 600 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-234ENST00000532844 HOXC9P31274 260 aa9.18□□□□□ -0.94
CTNND1-234ENST00000532844 MAP7D1Q3KQU3 841 aa9.18□□□□□ -0.94
CTNND1-234ENST00000532844 MAGEB6Q8N7X4 407 aa9.18□□□□□ -0.94
CTNND1-234ENST00000532844 TTC16Q8NEE8 873 aa9.18□□□□□ -0.94
CTNND1-234ENST00000532844 IQCGQ9H095 443 aaKnown RBP9.18□□□□□ -0.94
CTNND1-234ENST00000532844 ZNF853P0CG23 659 aa9.18□□□□□ -0.94
CTNND1-234ENST00000532844 NAPAP54920 295 aa9.18□□□□□ -0.94
CTNND1-234ENST00000532844 SEPT14Q6ZU15 432 aa9.18□□□□□ -0.94
CTNND1-234ENST00000532844 ERMNQ8TAM6 284 aa9.18□□□□□ -0.94
CTNND1-234ENST00000532844 ZMAT2Q96NC0 199 aaKnown RBP9.18□□□□□ -0.94
CTNND1-234ENST00000532844 ASIC1P78348 528 aa9.18□□□□□ -0.94
CTNND1-234ENST00000532844 ZBTB16Q05516 673 aa9.18□□□□□ -0.94
CTNND1-234ENST00000532844 SPAG1Q07617 926 aa9.18□□□□□ -0.94
CTNND1-234ENST00000532844 G2E3Q7L622 706 aa9.18□□□□□ -0.94
CTNND1-234ENST00000532844 DHX32Q7L7V1 743 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms