RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 ADORA1P30542 326 aa17.29■□□□□ 0.36
TSPAN4-220ENST00000532375 G3BP1Q13283 466 aaKnown RBP eCLIP17.29■□□□□ 0.36
TSPAN4-220ENST00000532375 TBC1D10BQ4KMP7 808 aaPredicted RBP17.29■□□□□ 0.36
TSPAN4-220ENST00000532375 RPAP2Q8IXW5 612 aaPredicted RBP17.29■□□□□ 0.36
TSPAN4-220ENST00000532375 ZC3H15Q8WU90 426 aaKnown RBP17.29■□□□□ 0.36
TSPAN4-220ENST00000532375 SURF6O75683 361 aaKnown RBP17.28■□□□□ 0.36
TSPAN4-220ENST00000532375 GRIK5Q16478 980 aa17.28■□□□□ 0.36
TSPAN4-220ENST00000532375 CNTROBQ8N137 903 aa17.28■□□□□ 0.36
TSPAN4-220ENST00000532375 ZBED3Q96IU2 234 aaPredicted RBP17.28■□□□□ 0.36
TSPAN4-220ENST00000532375 IQSEC3Q9UPP2 1182 aaPredicted RBP17.28■□□□□ 0.36
TSPAN4-220ENST00000532375 JAG2Q9Y219 1238 aa17.28■□□□□ 0.36
TSPAN4-220ENST00000532375 CLEC11AQ9Y240 323 aa17.28■□□□□ 0.36
TSPAN4-220ENST00000532375 ASTN2O75129 1339 aaPredicted RBP17.27■□□□□ 0.36
TSPAN4-220ENST00000532375 A0A1B0GUL7 405 aa17.27■□□□□ 0.36
TSPAN4-220ENST00000532375 CAVIN4Q5BKX8 364 aa17.27■□□□□ 0.36
TSPAN4-220ENST00000532375 RBM26Q5T8P6 1007 aaKnown RBP17.27■□□□□ 0.36
TSPAN4-220ENST00000532375 FBXW7Q969H0 707 aa17.27■□□□□ 0.36
TSPAN4-220ENST00000532375 MYOZ2Q9NPC6 264 aa17.27■□□□□ 0.36
TSPAN4-220ENST00000532375 COL1A1P02452 1464 aaPredicted RBP17.26■□□□□ 0.35
TSPAN4-220ENST00000532375 PHKA1P46020 1223 aa17.26■□□□□ 0.35
TSPAN4-220ENST00000532375 FMR1Q06787 632 aaKnown RBP eCLIP17.26■□□□□ 0.35
TSPAN4-220ENST00000532375 KIF4BQ2VIQ3 1234 aa17.26■□□□□ 0.35
TSPAN4-220ENST00000532375 KIAA0825Q8IV33 1275 aa17.26■□□□□ 0.35
TSPAN4-220ENST00000532375 CHMP4BQ9H444 224 aaKnown RBP17.26■□□□□ 0.35
TSPAN4-220ENST00000532375 GPR108Q9NPR9 543 aa17.26■□□□□ 0.35
TSPAN4-220ENST00000532375 MMP14P50281 582 aa17.25■□□□□ 0.35
TSPAN4-220ENST00000532375 CCDC102BQ68D86 513 aa17.25■□□□□ 0.35
TSPAN4-220ENST00000532375 VPS37DQ86XT2 251 aa17.25■□□□□ 0.35
TSPAN4-220ENST00000532375 XAGE2Q96GT9 111 aa17.25■□□□□ 0.35
TSPAN4-220ENST00000532375 AKAP2Q9Y2D5 859 aa17.25■□□□□ 0.35
TSPAN4-220ENST00000532375 MYH13Q9UKX3 1938 aa17.25■□□□□ 0.35
TSPAN4-220ENST00000532375 CEP350Q5VT06 3117 aa17.25■□□□□ 0.35
TSPAN4-220ENST00000532375 APLP1P51693 650 aa17.24■□□□□ 0.35
TSPAN4-220ENST00000532375 SCARF1Q14162 830 aa17.24■□□□□ 0.35
TSPAN4-220ENST00000532375 NBPF9Q3BBW0 867 aa17.24■□□□□ 0.35
TSPAN4-220ENST00000532375 MFSD14BQ5SR56 506 aa17.24■□□□□ 0.35
TSPAN4-220ENST00000532375 PCDHAC2Q9Y5I4 1007 aa17.24■□□□□ 0.35
TSPAN4-220ENST00000532375 TRAF5O00463 557 aa17.23■□□□□ 0.35
TSPAN4-220ENST00000532375 WNT10BO00744 389 aa17.23■□□□□ 0.35
TSPAN4-220ENST00000532375 HTRA3P83110 453 aa17.23■□□□□ 0.35
TSPAN4-220ENST00000532375 DLK2Q6UY11 383 aa17.23■□□□□ 0.35
TSPAN4-220ENST00000532375 MTMR14Q8NCE2 650 aa17.23■□□□□ 0.35
TSPAN4-220ENST00000532375 GLIS2Q9BZE0 524 aaPredicted RBP17.23■□□□□ 0.35
TSPAN4-220ENST00000532375 EXOC6BQ9Y2D4 811 aa17.23■□□□□ 0.35
TSPAN4-220ENST00000532375 CHAF1AQ13111 956 aaPredicted RBP17.22■□□□□ 0.35
TSPAN4-220ENST00000532375 TNNI3KQ59H18 835 aa17.22■□□□□ 0.35
TSPAN4-220ENST00000532375 OGFOD1Q8N543 542 aa17.22■□□□□ 0.35
TSPAN4-220ENST00000532375 DNAJC5GQ8N7S2 189 aa17.22■□□□□ 0.35
TSPAN4-220ENST00000532375 EAF2Q96CJ1 260 aaPredicted RBP17.22■□□□□ 0.35
TSPAN4-220ENST00000532375 CRBNQ96SW2 442 aa17.22■□□□□ 0.35
TSPAN4-220ENST00000532375 PCDHB15Q9Y5E8 787 aa17.22■□□□□ 0.35
TSPAN4-220ENST00000532375 FPGT-TNNI3KV9GXZ4 949 aa17.22■□□□□ 0.35
TSPAN4-220ENST00000532375 TRPM7Q96QT4 1865 aa17.22■□□□□ 0.35
TSPAN4-220ENST00000532375 AOX1Q06278 1338 aa17.21■□□□□ 0.35
TSPAN4-220ENST00000532375 F8W031 263 aaPredicted RBP17.21■□□□□ 0.35
TSPAN4-220ENST00000532375 CST9Q5W186 159 aa17.21■□□□□ 0.35
TSPAN4-220ENST00000532375 CDC37L1Q7L3B6 337 aa17.21■□□□□ 0.35
TSPAN4-220ENST00000532375 TBC1D22AQ8WUA7 517 aa17.21■□□□□ 0.35
TSPAN4-220ENST00000532375 NEUROD6Q96NK8 337 aa17.21■□□□□ 0.35
TSPAN4-220ENST00000532375 AKAP11Q9UKA4 1901 aa17.21■□□□□ 0.35
TSPAN4-220ENST00000532375 SEMA3EO15041 775 aa17.2■□□□□ 0.34
TSPAN4-220ENST00000532375 RASGRF1Q13972 1273 aa17.2■□□□□ 0.34
TSPAN4-220ENST00000532375 USP48Q86UV5 1035 aa17.2■□□□□ 0.34
TSPAN4-220ENST00000532375 PRMT6Q96LA8 375 aaPredicted RBP17.2■□□□□ 0.34
TSPAN4-220ENST00000532375 DBNDD2Q9BQY9 259 aa17.2■□□□□ 0.34
TSPAN4-220ENST00000532375 GGA3Q9NZ52 723 aa17.2■□□□□ 0.34
TSPAN4-220ENST00000532375 HDAC9Q9UKV0 1011 aa17.2■□□□□ 0.34
TSPAN4-220ENST00000532375 TTF2Q9UNY4 1162 aaKnown RBP17.2■□□□□ 0.34
TSPAN4-220ENST00000532375 HMMRO75330 724 aa17.19■□□□□ 0.34
TSPAN4-220ENST00000532375 FRAT2O75474 233 aaPredicted RBP17.19■□□□□ 0.34
TSPAN4-220ENST00000532375 OS9Q13438 667 aaPredicted RBP17.19■□□□□ 0.34
TSPAN4-220ENST00000532375 CFAP100Q494V2 611 aa17.19■□□□□ 0.34
TSPAN4-220ENST00000532375 ANGEL2Q5VTE6 544 aaKnown RBP17.19■□□□□ 0.34
TSPAN4-220ENST00000532375 WDR66Q8TBY9 1149 aa17.19■□□□□ 0.34
TSPAN4-220ENST00000532375 RHPN1Q8TCX5 695 aa17.19■□□□□ 0.34
TSPAN4-220ENST00000532375 MRIQ9BWK5 157 aa17.19■□□□□ 0.34
TSPAN4-220ENST00000532375 GNL3LQ9NVN8 582 aaKnown RBP17.19■□□□□ 0.34
TSPAN4-220ENST00000532375 DBNLQ9UJU6 430 aaKnown RBP17.19■□□□□ 0.34
TSPAN4-220ENST00000532375 DENND2AQ9ULE3 1009 aa17.19■□□□□ 0.34
TSPAN4-220ENST00000532375 SUGT1Q9Y2Z0 365 aa17.19■□□□□ 0.34
TSPAN4-220ENST00000532375 ECM29Q5VYK3 1845 aa17.19■□□□□ 0.34
TSPAN4-220ENST00000532375 PDS5AQ29RF7 1337 aaKnown RBP17.19■□□□□ 0.34
TSPAN4-220ENST00000532375 PITPNM2Q9BZ72 1349 aa17.19■□□□□ 0.34
TSPAN4-220ENST00000532375 SALL1Q9NSC2 1324 aa17.19■□□□□ 0.34
TSPAN4-220ENST00000532375 SPDYE2BA6NHP3 402 aa17.18■□□□□ 0.34
TSPAN4-220ENST00000532375 ADM5C9JUS6 153 aa17.18■□□□□ 0.34
TSPAN4-220ENST00000532375 SPDYE6P0CI01 402 aa17.18■□□□□ 0.34
TSPAN4-220ENST00000532375 ARID4AP29374 1257 aaPredicted RBP17.18■□□□□ 0.34
TSPAN4-220ENST00000532375 HDLBPQ00341 1268 aaKnown RBP17.18■□□□□ 0.34
TSPAN4-220ENST00000532375 TLR7Q9NYK1 1049 aaKnown RBP17.18■□□□□ 0.34
TSPAN4-220ENST00000532375 HMG20BQ9P0W2 317 aa17.18■□□□□ 0.34
TSPAN4-220ENST00000532375 SERPINA10Q9UK55 444 aa17.18■□□□□ 0.34
TSPAN4-220ENST00000532375 SUPT16HQ9Y5B9 1047 aaKnown RBP17.18■□□□□ 0.34
TSPAN4-220ENST00000532375 DLGAP5Q15398 846 aa17.17■□□□□ 0.34
TSPAN4-220ENST00000532375 HSP90AB4PQ58FF6 505 aa17.17■□□□□ 0.34
TSPAN4-220ENST00000532375 PI16Q6UXB8 463 aa17.17■□□□□ 0.34
TSPAN4-220ENST00000532375 KRT26Q7Z3Y9 468 aa17.17■□□□□ 0.34
TSPAN4-220ENST00000532375 ERC1Q8IUD2 1116 aa17.17■□□□□ 0.34
TSPAN4-220ENST00000532375 DCPSQ96C86 337 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-220ENST00000532375 CCDC8Q9H0W5 538 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms