RNA–Protein interactions for RNA: ENST00000532041.5

PICALM-218, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 3

Gene PICALM, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-218	ENST00000532041	RABL6	Q3YEC7	729 aa	Predicted RBP	29.25	■■■□□ 2.27
PICALM-218	ENST00000532041	ANKRD44	Q8N8A2	993 aa		29.25	■■■□□ 2.27
PICALM-218	ENST00000532041	PCDHAC2	Q9Y5I4	1007 aa		29.25	■■■□□ 2.27
PICALM-218	ENST00000532041	ECM29	Q5VYK3	1845 aa		29.24	■■■□□ 2.27
PICALM-218	ENST00000532041	UBE2Q2L	H0YL09	131 aa		29.23	■■■□□ 2.27
PICALM-218	ENST00000532041	AKAP11	Q9UKA4	1901 aa		29.22	■■■□□ 2.27
PICALM-218	ENST00000532041	APOBEC3F	Q8IUX4	373 aa	Known RBP	29.22	■■■□□ 2.27
PICALM-218	ENST00000532041	CSRNP1	Q96S65	589 aa		29.22	■■■□□ 2.27
PICALM-218	ENST00000532041	ARAP2	Q8WZ64	1704 aa		29.21	■■■□□ 2.27
PICALM-218	ENST00000532041		F8W031	263 aa	Predicted RBP	29.21	■■■□□ 2.27
PICALM-218	ENST00000532041	SAGE1	Q9NXZ1	904 aa		29.21	■■■□□ 2.27
PICALM-218	ENST00000532041	RIPOR2	Q9Y4F9	1068 aa		29.21	■■■□□ 2.27
PICALM-218	ENST00000532041	AOX1	Q06278	1338 aa		29.2	■■■□□ 2.27
PICALM-218	ENST00000532041	FKBP1A	P62942	108 aa	Known RBP	29.2	■■■□□ 2.26
PICALM-218	ENST00000532041	UBE4A	Q14139	1066 aa		29.2	■■■□□ 2.26
PICALM-218	ENST00000532041	MTMR14	Q8NCE2	650 aa		29.2	■■■□□ 2.26
PICALM-218	ENST00000532041	RNF186	Q9NXI6	227 aa		29.2	■■■□□ 2.26
PICALM-218	ENST00000532041	COL1A1	P02452	1464 aa	Predicted RBP	29.19	■■■□□ 2.26
PICALM-218	ENST00000532041	GYG1	P46976	350 aa		29.19	■■■□□ 2.26
PICALM-218	ENST00000532041	DLGAP5	Q15398	846 aa		29.19	■■■□□ 2.26
PICALM-218	ENST00000532041	TRMT2A	Q8IZ69	625 aa	Known RBP	29.19	■■■□□ 2.26
PICALM-218	ENST00000532041	FAM205A	Q6ZU69	1335 aa		29.19	■■■□□ 2.26
PICALM-218	ENST00000532041	SSC5D	A1L4H1	1573 aa		29.18	■■■□□ 2.26
PICALM-218	ENST00000532041	CFAP100	Q494V2	611 aa		29.18	■■■□□ 2.26
PICALM-218	ENST00000532041	LRRC24	Q50LG9	513 aa		29.18	■■■□□ 2.26
PICALM-218	ENST00000532041	TDRD7	Q8NHU6	1098 aa	Known RBP	29.18	■■■□□ 2.26
PICALM-218	ENST00000532041	USP44	Q9H0E7	712 aa		29.18	■■■□□ 2.26
PICALM-218	ENST00000532041	TRPA1	O75762	1119 aa		29.17	■■■□□ 2.26
PICALM-218	ENST00000532041	TTLL12	Q14166	644 aa	Predicted RBP	29.17	■■■□□ 2.26
PICALM-218	ENST00000532041	ALDH1L2	Q3SY69	923 aa		29.17	■■■□□ 2.26
PICALM-218	ENST00000532041	FAM84B	Q96KN1	310 aa	Predicted RBP	29.17	■■■□□ 2.26
PICALM-218	ENST00000532041	MROH5	Q6ZUA9	1318 aa		29.17	■■■□□ 2.26
PICALM-218	ENST00000532041	SPDYE2B	A6NHP3	402 aa		29.16	■■■□□ 2.26
PICALM-218	ENST00000532041	SPDYE6	P0CI01	402 aa		29.16	■■■□□ 2.26
PICALM-218	ENST00000532041	KLHDC4	Q8TBB5	520 aa		29.16	■■■□□ 2.26
PICALM-218	ENST00000532041	MCOLN1	Q9GZU1	580 aa		29.16	■■■□□ 2.26
PICALM-218	ENST00000532041	SMC4	Q9NTJ3	1288 aa		29.16	■■■□□ 2.26
PICALM-218	ENST00000532041	NF2	P35240	595 aa		29.15	■■■□□ 2.26
PICALM-218	ENST00000532041	VGLL2	Q8N8G2	317 aa		29.15	■■■□□ 2.26
PICALM-218	ENST00000532041	CLRN2	A0PK11	232 aa		29.14	■■■□□ 2.26
PICALM-218	ENST00000532041	HIBADH	P31937	336 aa	Known RBP	29.14	■■■□□ 2.26
PICALM-218	ENST00000532041	PRKG1	Q13976	671 aa		29.14	■■■□□ 2.26
PICALM-218	ENST00000532041	PRMT6	Q96LA8	375 aa	Predicted RBP	29.14	■■■□□ 2.26
PICALM-218	ENST00000532041	DEFB129	Q9H1M3	183 aa		29.14	■■■□□ 2.26
PICALM-218	ENST00000532041	FZD1	Q9UP38	647 aa		29.14	■■■□□ 2.26
PICALM-218	ENST00000532041	PTPN12	Q05209	780 aa	Known RBP	29.13	■■■□□ 2.25
PICALM-218	ENST00000532041	MFSD14B	Q5SR56	506 aa		29.13	■■■□□ 2.25
PICALM-218	ENST00000532041	METTL24	Q5JXM2	366 aa		29.12	■■■□□ 2.25
PICALM-218	ENST00000532041	DGKZ	Q13574	1117 aa		29.11	■■■□□ 2.25
PICALM-218	ENST00000532041	FBXO33	Q7Z6M2	555 aa		29.11	■■■□□ 2.25
PICALM-218	ENST00000532041	CCER2	I3L3R5	266 aa		29.1	■■■□□ 2.25
PICALM-218	ENST00000532041	MKRN3	Q13064	507 aa	Known RBP	29.1	■■■□□ 2.25
PICALM-218	ENST00000532041	LDLRAD1	Q5T700	205 aa		29.1	■■■□□ 2.25
PICALM-218	ENST00000532041	ARMC9	Q7Z3E5	817 aa		29.1	■■■□□ 2.25
PICALM-218	ENST00000532041	REM2	Q8IYK8	340 aa	Predicted RBP	29.1	■■■□□ 2.25
PICALM-218	ENST00000532041	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	29.1	■■■□□ 2.25
PICALM-218	ENST00000532041	RFX5	P48382	616 aa	Predicted RBP	29.09	■■■□□ 2.25
PICALM-218	ENST00000532041	GRIK5	Q16478	980 aa		29.09	■■■□□ 2.25
PICALM-218	ENST00000532041	VEZT	Q9HBM0	779 aa		29.09	■■■□□ 2.25
PICALM-218	ENST00000532041	ANGEL1	Q9UNK9	670 aa	Known RBP	29.09	■■■□□ 2.25
PICALM-218	ENST00000532041	CCDC85C	A6NKD9	419 aa		29.08	■■■□□ 2.25
PICALM-218	ENST00000532041	PDE8B	O95263	885 aa		29.08	■■■□□ 2.25
PICALM-218	ENST00000532041	RBM5	P52756	815 aa	Known RBP eCLIP	29.08	■■■□□ 2.25
PICALM-218	ENST00000532041	TTF2	Q9UNY4	1162 aa	Known RBP	29.08	■■■□□ 2.25
PICALM-218	ENST00000532041	PPP2R3B	Q9Y5P8	575 aa		29.08	■■■□□ 2.25
PICALM-218	ENST00000532041	MYO1B	O43795	1136 aa		29.07	■■■□□ 2.24
PICALM-218	ENST00000532041	CT47B1	P0C2W7	299 aa	Predicted RBP	29.06	■■■□□ 2.24
PICALM-218	ENST00000532041	SERPINA10	Q9UK55	444 aa		29.06	■■■□□ 2.24
PICALM-218	ENST00000532041	NOB1	Q9ULX3	412 aa	Known RBP	29.06	■■■□□ 2.24
PICALM-218	ENST00000532041	FGFR2	P21802	821 aa		29.05	■■■□□ 2.24
PICALM-218	ENST00000532041	CHAF1A	Q13111	956 aa	Predicted RBP	29.05	■■■□□ 2.24
PICALM-218	ENST00000532041	MAP3K11	Q16584	847 aa		29.05	■■■□□ 2.24
PICALM-218	ENST00000532041	SPDYE2	Q495Y8	402 aa		29.05	■■■□□ 2.24
PICALM-218	ENST00000532041	BCAM	P50895	628 aa		29.04	■■■□□ 2.24
PICALM-218	ENST00000532041	NBPF12	Q5TAG4	269 aa	Predicted RBP	29.04	■■■□□ 2.24
PICALM-218	ENST00000532041	VPS37D	Q86XT2	251 aa		29.04	■■■□□ 2.24
PICALM-218	ENST00000532041	CLMN	Q96JQ2	1002 aa		29.04	■■■□□ 2.24
PICALM-218	ENST00000532041	ZNF70	Q9UC06	446 aa	Predicted RBP	29.04	■■■□□ 2.24
PICALM-218	ENST00000532041	OTOF	Q9HC10	1997 aa		29.04	■■■□□ 2.24
PICALM-218	ENST00000532041	TM4SF4	P48230	202 aa		29.03	■■■□□ 2.24
PICALM-218	ENST00000532041	RASA3	Q14644	834 aa		29.03	■■■□□ 2.24
PICALM-218	ENST00000532041	TDRD3	Q9H7E2	651 aa	Known RBP	29.03	■■■□□ 2.24
PICALM-218	ENST00000532041	EYA2	O00167	538 aa		29.02	■■■□□ 2.24
PICALM-218	ENST00000532041	CRK	P46108	304 aa		29.02	■■■□□ 2.24
PICALM-218	ENST00000532041	PUM3	Q15397	648 aa	Known RBP	29.02	■■■□□ 2.24
PICALM-218	ENST00000532041	SPRYD7	Q5W111	196 aa		29.02	■■■□□ 2.24
PICALM-218	ENST00000532041	DZIP1L	Q8IYY4	767 aa	Known RBP	29.02	■■■□□ 2.24
PICALM-218	ENST00000532041	LAMB1	P07942	1786 aa		29.02	■■■□□ 2.24
PICALM-218	ENST00000532041	CAVIN4	Q5BKX8	364 aa		29.01	■■■□□ 2.23
PICALM-218	ENST00000532041	ATG9A	Q7Z3C6	839 aa		29.01	■■■□□ 2.23
PICALM-218	ENST00000532041	CDAN1	Q8IWY9	1227 aa		29.01	■■■□□ 2.23
PICALM-218	ENST00000532041	KIF16B	Q96L93	1317 aa		29	■■■□□ 2.23
PICALM-218	ENST00000532041	TBC1D8	O95759	1140 aa		29	■■■□□ 2.23
PICALM-218	ENST00000532041	UBTFL1	P0CB47	393 aa	Predicted RBP	29	■■■□□ 2.23
PICALM-218	ENST00000532041	RARS	P54136	660 aa	Known RBP	29	■■■□□ 2.23
PICALM-218	ENST00000532041	MYH13	Q9UKX3	1938 aa		29	■■■□□ 2.23
PICALM-218	ENST00000532041	PPP1R12B	O60237	982 aa	Predicted RBP	28.99	■■■□□ 2.23
PICALM-218	ENST00000532041	SUPT20HL1	Q3ZLR7	823 aa		28.99	■■■□□ 2.23
PICALM-218	ENST00000532041	API5	Q9BZZ5	524 aa	Known RBP	28.99	■■■□□ 2.23
PICALM-218	ENST00000532041	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	28.99	■■■□□ 2.23

Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms