RNA–Protein interactions for RNA: ENST00000531432.1

PPP6R3-223, Transcript of protein phosphatase 6 regulatory subunit 3, human

TSL 3

Gene PPP6R3, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP6R3-223	ENST00000531432	PARP2	Q9UGN5	583 aa		10.81	□□□□□ -0.68
PPP6R3-223	ENST00000531432	SPG7	Q9UQ90	795 aa		10.81	□□□□□ -0.68
PPP6R3-223	ENST00000531432	FSCN2	O14926	492 aa		10.8	□□□□□ -0.68
PPP6R3-223	ENST00000531432	GNA15	P30679	374 aa		10.8	□□□□□ -0.68
PPP6R3-223	ENST00000531432	GRIK4	Q16099	956 aa		10.8	□□□□□ -0.68
PPP6R3-223	ENST00000531432	ZNF576	Q9H609	170 aa		10.8	□□□□□ -0.68
PPP6R3-223	ENST00000531432	PODXL2	Q9NZ53	605 aa		10.8	□□□□□ -0.68
PPP6R3-223	ENST00000531432	FGD1	P98174	961 aa		10.79	□□□□□ -0.68
PPP6R3-223	ENST00000531432	GIPC2	Q8TF65	315 aa		10.79	□□□□□ -0.68
PPP6R3-223	ENST00000531432	C12orf49	Q9H741	205 aa		10.79	□□□□□ -0.68
PPP6R3-223	ENST00000531432	KRBA1	A5PL33	1030 aa		10.78	□□□□□ -0.68
PPP6R3-223	ENST00000531432	SOX1	O00570	391 aa	Predicted RBP	10.78	□□□□□ -0.68
PPP6R3-223	ENST00000531432	ESRRA	P11474	423 aa	Predicted RBP	10.78	□□□□□ -0.68
PPP6R3-223	ENST00000531432	ELN	P15502	786 aa		10.78	□□□□□ -0.68
PPP6R3-223	ENST00000531432	PCDH1	Q08174	1060 aa		10.78	□□□□□ -0.68
PPP6R3-223	ENST00000531432	IKBKE	Q14164	716 aa		10.78	□□□□□ -0.68
PPP6R3-223	ENST00000531432	FAM117B	Q6P1L5	589 aa		10.78	□□□□□ -0.68
PPP6R3-223	ENST00000531432	ALYREF	Q86V81	257 aa	Known RBP	10.78	□□□□□ -0.68
PPP6R3-223	ENST00000531432	RGS22	Q8NE09	1264 aa		10.78	□□□□□ -0.68
PPP6R3-223	ENST00000531432	SLC7A3	Q8WY07	619 aa		10.78	□□□□□ -0.68
PPP6R3-223	ENST00000531432	FAM161B	Q96MY7	647 aa		10.78	□□□□□ -0.68
PPP6R3-223	ENST00000531432	CLEC4M	Q9H2X3	399 aa	Predicted RBP	10.78	□□□□□ -0.68
PPP6R3-223	ENST00000531432	SRA1	Q9HD15	236 aa	Known RBP	10.78	□□□□□ -0.68
PPP6R3-223	ENST00000531432	CCDC9	Q9Y3X0	531 aa	Known RBP	10.78	□□□□□ -0.68
PPP6R3-223	ENST00000531432	DLL1	O00548	723 aa		10.77	□□□□□ -0.69
PPP6R3-223	ENST00000531432	GIPC1	O14908	333 aa		10.77	□□□□□ -0.69
PPP6R3-223	ENST00000531432	PIP4K2B	P78356	416 aa		10.77	□□□□□ -0.69
PPP6R3-223	ENST00000531432	PTPN12	Q05209	780 aa	Known RBP	10.77	□□□□□ -0.69
PPP6R3-223	ENST00000531432	ZNF423	Q2M1K9	1284 aa		10.77	□□□□□ -0.69
PPP6R3-223	ENST00000531432	SHISA2	Q6UWI4	295 aa		10.77	□□□□□ -0.69
PPP6R3-223	ENST00000531432	DTHD1	Q6ZMT9	781 aa		10.77	□□□□□ -0.69
PPP6R3-223	ENST00000531432	MAP4K3	Q8IVH8	894 aa		10.77	□□□□□ -0.69
PPP6R3-223	ENST00000531432	C3orf58	Q8NDZ4	430 aa		10.77	□□□□□ -0.69
PPP6R3-223	ENST00000531432	KLHDC7B	Q96G42	594 aa		10.77	□□□□□ -0.69
PPP6R3-223	ENST00000531432	FRMD6	Q96NE9	622 aa		10.77	□□□□□ -0.69
PPP6R3-223	ENST00000531432	SELP	P16109	830 aa		10.76	□□□□□ -0.69
PPP6R3-223	ENST00000531432	DAB2	P98082	770 aa		10.76	□□□□□ -0.69
PPP6R3-223	ENST00000531432	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	10.76	□□□□□ -0.69
PPP6R3-223	ENST00000531432	FOXD4L3	Q6VB84	417 aa	Predicted RBP	10.76	□□□□□ -0.69
PPP6R3-223	ENST00000531432	WNT8B	Q93098	351 aa		10.76	□□□□□ -0.69
PPP6R3-223	ENST00000531432	SRCIN1	Q9C0H9	1055 aa		10.76	□□□□□ -0.69
PPP6R3-223	ENST00000531432	SEC31B	Q9NQW1	1179 aa		10.76	□□□□□ -0.69
PPP6R3-223	ENST00000531432	PPP4R2	Q9NY27	417 aa		10.76	□□□□□ -0.69
PPP6R3-223	ENST00000531432	GDF11	O95390	407 aa		10.75	□□□□□ -0.69
PPP6R3-223	ENST00000531432	FAAP100	Q0VG06	881 aa		10.75	□□□□□ -0.69
PPP6R3-223	ENST00000531432	OSGEP	Q9NPF4	335 aa		10.75	□□□□□ -0.69
PPP6R3-223	ENST00000531432	KCNK4	Q9NYG8	393 aa		10.75	□□□□□ -0.69
PPP6R3-223	ENST00000531432	AK5	Q9Y6K8	562 aa		10.75	□□□□□ -0.69
PPP6R3-223	ENST00000531432	ADAM11	O75078	769 aa		10.74	□□□□□ -0.69
PPP6R3-223	ENST00000531432	USP17L7	P0C7H9	530 aa		10.74	□□□□□ -0.69
PPP6R3-223	ENST00000531432	ZNF16	P17020	682 aa	Predicted RBP	10.74	□□□□□ -0.69
PPP6R3-223	ENST00000531432	EIF4B	P23588	611 aa	Known RBP	10.74	□□□□□ -0.69
PPP6R3-223	ENST00000531432	XPC	Q01831	940 aa	Predicted RBP	10.74	□□□□□ -0.69
PPP6R3-223	ENST00000531432	PSMD2	Q13200	908 aa		10.74	□□□□□ -0.69
PPP6R3-223	ENST00000531432	TMC4	Q7Z404	712 aa		10.74	□□□□□ -0.69
PPP6R3-223	ENST00000531432	TMEM151A	Q8N4L1	468 aa		10.74	□□□□□ -0.69
PPP6R3-223	ENST00000531432	KLHL23	Q8NBE8	558 aa		10.74	□□□□□ -0.69
PPP6R3-223	ENST00000531432	FAM8A1	Q9UBU6	413 aa		10.74	□□□□□ -0.69
PPP6R3-223	ENST00000531432	DDX3Y	O15523	660 aa	Known RBP	10.73	□□□□□ -0.69
PPP6R3-223	ENST00000531432	XRCC5	P13010	732 aa	Known RBP	10.73	□□□□□ -0.69
PPP6R3-223	ENST00000531432	GSTT1	P30711	240 aa		10.73	□□□□□ -0.69
PPP6R3-223	ENST00000531432	CHRNA4	P43681	627 aa		10.73	□□□□□ -0.69
PPP6R3-223	ENST00000531432	C19orf57	Q0VDD7	668 aa		10.73	□□□□□ -0.69
PPP6R3-223	ENST00000531432	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	10.73	□□□□□ -0.69
PPP6R3-223	ENST00000531432	AKAP2	Q9Y2D5	859 aa		10.73	□□□□□ -0.69
PPP6R3-223	ENST00000531432	B3GALT4	O96024	378 aa		10.72	□□□□□ -0.69
PPP6R3-223	ENST00000531432	CD68	P34810	354 aa	Predicted RBP	10.72	□□□□□ -0.69
PPP6R3-223	ENST00000531432	ARL4D	P49703	201 aa		10.72	□□□□□ -0.69
PPP6R3-223	ENST00000531432	ZNF326	Q5BKZ1	582 aa	Known RBP	10.72	□□□□□ -0.69
PPP6R3-223	ENST00000531432	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	10.72	□□□□□ -0.69
PPP6R3-223	ENST00000531432	SOX17	Q9H6I2	414 aa	Predicted RBP	10.72	□□□□□ -0.69
PPP6R3-223	ENST00000531432	APBA3	O96018	575 aa		10.71	□□□□□ -0.69
PPP6R3-223	ENST00000531432	ITGB2	P05107	769 aa		10.71	□□□□□ -0.69
PPP6R3-223	ENST00000531432	ZNF157	P51786	506 aa	Predicted RBP	10.71	□□□□□ -0.69
PPP6R3-223	ENST00000531432	SUZ12	Q15022	739 aa	Known RBP	10.71	□□□□□ -0.69
PPP6R3-223	ENST00000531432	IGF2-AS	Q6U949	168 aa		10.71	□□□□□ -0.69
PPP6R3-223	ENST00000531432	WISP1	O95388	367 aa		10.7	□□□□□ -0.7
PPP6R3-223	ENST00000531432	NLRP12	P59046	1061 aa		10.7	□□□□□ -0.7
PPP6R3-223	ENST00000531432	GSTM4	Q03013	218 aa		10.7	□□□□□ -0.7
PPP6R3-223	ENST00000531432	CD163	Q86VB7	1156 aa		10.7	□□□□□ -0.7
PPP6R3-223	ENST00000531432	LENG1	Q96BZ8	264 aa	Predicted RBP	10.7	□□□□□ -0.7
PPP6R3-223	ENST00000531432	NACC1	Q96RE7	527 aa		10.7	□□□□□ -0.7
PPP6R3-223	ENST00000531432	RBM47	A0AV96	593 aa	Known RBP	10.69	□□□□□ -0.7
PPP6R3-223	ENST00000531432	C1QTNF9B	B2RNN3	333 aa		10.69	□□□□□ -0.7
PPP6R3-223	ENST00000531432	DCAF11	Q8TEB1	546 aa		10.69	□□□□□ -0.7
PPP6R3-223	ENST00000531432	UBASH3B	Q8TF42	649 aa		10.69	□□□□□ -0.7
PPP6R3-223	ENST00000531432	ZFYVE1	Q9HBF4	777 aa		10.69	□□□□□ -0.7
PPP6R3-223	ENST00000531432	C9orf172	C9J069	976 aa		10.68	□□□□□ -0.7
PPP6R3-223	ENST00000531432	FBXO24	O75426	580 aa		10.68	□□□□□ -0.7
PPP6R3-223	ENST00000531432	CTSH	P09668	335 aa		10.68	□□□□□ -0.7
PPP6R3-223	ENST00000531432	PLA2G4E	Q3MJ16	856 aa		10.68	□□□□□ -0.7
PPP6R3-223	ENST00000531432	TRIM56	Q9BRZ2	755 aa	Known RBP	10.68	□□□□□ -0.7
PPP6R3-223	ENST00000531432	NRSN2	Q9GZP1	204 aa		10.68	□□□□□ -0.7
PPP6R3-223	ENST00000531432	GPN3	Q9UHW5	284 aa	Predicted RBP	10.68	□□□□□ -0.7
PPP6R3-223	ENST00000531432	SORBS3	O60504	671 aa		10.67	□□□□□ -0.7
PPP6R3-223	ENST00000531432	TPTE2	Q6XPS3	522 aa		10.67	□□□□□ -0.7
PPP6R3-223	ENST00000531432	MRPL18	Q9H0U6	180 aa	Known RBP	10.67	□□□□□ -0.7
PPP6R3-223	ENST00000531432	USP21	Q9UK80	565 aa		10.67	□□□□□ -0.7
PPP6R3-223	ENST00000531432	PPM1H	Q9ULR3	514 aa		10.67	□□□□□ -0.7
PPP6R3-223	ENST00000531432	ADGRE1	Q14246	886 aa		10.66	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms