RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 ARFGEF1Q9Y6D6 1849 aa7.83□□□□□ -1.16
ATPAF1-209ENST00000529214 ANKRD18BA2A2Z9 1011 aa7.82□□□□□ -1.16
ATPAF1-209ENST00000529214 MS4A1P11836 297 aa7.82□□□□□ -1.16
ATPAF1-209ENST00000529214 RLBP1P12271 317 aa7.82□□□□□ -1.16
ATPAF1-209ENST00000529214 YY1P25490 414 aa7.82□□□□□ -1.16
ATPAF1-209ENST00000529214 IFIT5Q13325 482 aaKnown RBP7.82□□□□□ -1.16
ATPAF1-209ENST00000529214 CCDC57Q2TAC2 916 aa7.82□□□□□ -1.16
ATPAF1-209ENST00000529214 FAM161AQ3B820 660 aa7.82□□□□□ -1.16
ATPAF1-209ENST00000529214 C9orf131Q5VYM1 1079 aa7.82□□□□□ -1.16
ATPAF1-209ENST00000529214 MPNDQ8N594 471 aa7.82□□□□□ -1.16
ATPAF1-209ENST00000529214 MEIS3Q99687 375 aa7.82□□□□□ -1.16
ATPAF1-209ENST00000529214 RTFDC1Q9BY42 306 aaPredicted RBP7.82□□□□□ -1.16
ATPAF1-209ENST00000529214 OCEL1Q9H607 264 aa7.82□□□□□ -1.16
ATPAF1-209ENST00000529214 BICC1Q9H694 974 aaKnown RBP7.82□□□□□ -1.16
ATPAF1-209ENST00000529214 BSDC1Q9NW68 430 aaPredicted RBP7.82□□□□□ -1.16
ATPAF1-209ENST00000529214 SNED1Q8TER0 1413 aa7.82□□□□□ -1.16
ATPAF1-209ENST00000529214 ZBTB7BO15156 539 aaPredicted RBP7.81□□□□□ -1.16
ATPAF1-209ENST00000529214 PLIN1O60240 522 aa7.81□□□□□ -1.16
ATPAF1-209ENST00000529214 GNAI3P08754 354 aa7.81□□□□□ -1.16
ATPAF1-209ENST00000529214 UBTFL1P0CB47 393 aaPredicted RBP7.81□□□□□ -1.16
ATPAF1-209ENST00000529214 IGHMBP2P38935 993 aaKnown RBP7.81□□□□□ -1.16
ATPAF1-209ENST00000529214 DPP8Q6V1X1 898 aaPredicted RBP7.81□□□□□ -1.16
ATPAF1-209ENST00000529214 FTSJ3Q8IY81 847 aaKnown RBP7.81□□□□□ -1.16
ATPAF1-209ENST00000529214 ANKRD44Q8N8A2 993 aa7.81□□□□□ -1.16
ATPAF1-209ENST00000529214 KRTAP3-3Q9BYR6 98 aa7.81□□□□□ -1.16
ATPAF1-209ENST00000529214 KRTAP3-2Q9BYR7 98 aa7.81□□□□□ -1.16
ATPAF1-209ENST00000529214 VPS33BQ9H267 617 aa7.81□□□□□ -1.16
ATPAF1-209ENST00000529214 RNF181Q9P0P0 153 aa7.81□□□□□ -1.16
ATPAF1-209ENST00000529214 MINPP1Q9UNW1 487 aa7.81□□□□□ -1.16
ATPAF1-209ENST00000529214 NSFL1CQ9UNZ2 370 aaKnown RBP7.81□□□□□ -1.16
ATPAF1-209ENST00000529214 COG6Q9Y2V7 657 aa7.81□□□□□ -1.16
ATPAF1-209ENST00000529214 CHMP3Q9Y3E7 222 aa7.81□□□□□ -1.16
ATPAF1-209ENST00000529214 LAMB2P55268 1798 aa7.81□□□□□ -1.16
ATPAF1-209ENST00000529214 PSEN1P49768 467 aa7.81□□□□□ -1.16
ATPAF1-209ENST00000529214 GPSM2P81274 684 aa7.81□□□□□ -1.16
ATPAF1-209ENST00000529214 IFNL1Q8IU54 200 aa7.81□□□□□ -1.16
ATPAF1-209ENST00000529214 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.81□□□□□ -1.16
ATPAF1-209ENST00000529214 SUPT20HQ8NEM7 779 aa7.81□□□□□ -1.16
ATPAF1-209ENST00000529214 PANK1Q8TE04 598 aa7.81□□□□□ -1.16
ATPAF1-209ENST00000529214 MPHOSPH8Q99549 860 aa7.81□□□□□ -1.16
ATPAF1-209ENST00000529214 PRDM10Q9NQV6 1147 aa7.81□□□□□ -1.16
ATPAF1-209ENST00000529214 ZNF277Q9NRM2 450 aaPredicted RBP7.81□□□□□ -1.16
ATPAF1-209ENST00000529214 POLLQ9UGP5 575 aa7.81□□□□□ -1.16
ATPAF1-209ENST00000529214 COL4A1P02462 1669 aa7.8□□□□□ -1.16
ATPAF1-209ENST00000529214 SPDYE5A6NIY4 337 aa7.8□□□□□ -1.16
ATPAF1-209ENST00000529214 IARSP41252 1262 aaKnown RBP7.8□□□□□ -1.16
ATPAF1-209ENST00000529214 PDE3AQ14432 1141 aa7.8□□□□□ -1.16
ATPAF1-209ENST00000529214 LDHAL6AQ6ZMR3 332 aa7.8□□□□□ -1.16
ATPAF1-209ENST00000529214 TBC1D16Q8TBP0 767 aa7.8□□□□□ -1.16
ATPAF1-209ENST00000529214 ZNF594Q96JF6 807 aaPredicted RBP7.8□□□□□ -1.16
ATPAF1-209ENST00000529214 PLCD4Q9BRC7 762 aa7.8□□□□□ -1.16
ATPAF1-209ENST00000529214 ANKIB1Q9P2G1 1089 aa7.8□□□□□ -1.16
ATPAF1-209ENST00000529214 LRRFIP2Q9Y608 721 aaKnown RBP7.8□□□□□ -1.16
ATPAF1-209ENST00000529214 TAF1P21675 1872 aa7.79□□□□□ -1.16
ATPAF1-209ENST00000529214 C6orf229H3BNL8 230 aa7.79□□□□□ -1.16
ATPAF1-209ENST00000529214 GNAI2P04899 355 aa7.79□□□□□ -1.16
ATPAF1-209ENST00000529214 ATP2B4P23634 1241 aa7.79□□□□□ -1.16
ATPAF1-209ENST00000529214 RFX5P48382 616 aaPredicted RBP7.79□□□□□ -1.16
ATPAF1-209ENST00000529214 WASHC4Q2M389 1173 aa7.79□□□□□ -1.16
ATPAF1-209ENST00000529214 FER1L6Q2WGJ9 1857 aa7.79□□□□□ -1.16
ATPAF1-209ENST00000529214 CERS3Q8IU89 383 aa7.79□□□□□ -1.16
ATPAF1-209ENST00000529214 ITPRIPQ8IWB1 547 aa7.79□□□□□ -1.16
ATPAF1-209ENST00000529214 HS3ST6Q96QI5 342 aa7.79□□□□□ -1.16
ATPAF1-209ENST00000529214 ANKRD2Q9GZV1 360 aa7.79□□□□□ -1.16
ATPAF1-209ENST00000529214 USTQ9Y2C2 406 aa7.79□□□□□ -1.16
ATPAF1-209ENST00000529214 RIPOR2Q9Y4F9 1068 aa7.79□□□□□ -1.16
ATPAF1-209ENST00000529214 XDHP47989 1333 aa7.79□□□□□ -1.16
ATPAF1-209ENST00000529214 ZC3H4Q9UPT8 1303 aaKnown RBP7.79□□□□□ -1.16
ATPAF1-209ENST00000529214 CHD4Q14839 1912 aa7.78□□□□□ -1.16
ATPAF1-209ENST00000529214 GLTPD2A6NH11 291 aa7.78□□□□□ -1.16
ATPAF1-209ENST00000529214 WTIPA6NIX2 430 aaPredicted RBP7.78□□□□□ -1.16
ATPAF1-209ENST00000529214 SPDYE16A6NNV3 312 aaPredicted RBP7.78□□□□□ -1.16
ATPAF1-209ENST00000529214 FZD9O00144 591 aa7.78□□□□□ -1.16
ATPAF1-209ENST00000529214 PPIP5K2O43314 1243 aa7.78□□□□□ -1.16
ATPAF1-209ENST00000529214 PTPN12Q05209 780 aaKnown RBP7.78□□□□□ -1.16
ATPAF1-209ENST00000529214 CHRNDQ07001 517 aa7.78□□□□□ -1.16
ATPAF1-209ENST00000529214 KIAA2012Q0VF49 1180 aa7.78□□□□□ -1.16
ATPAF1-209ENST00000529214 MTX1Q13505 466 aa7.78□□□□□ -1.16
ATPAF1-209ENST00000529214 MVPQ14764 893 aaKnown RBP7.78□□□□□ -1.16
ATPAF1-209ENST00000529214 AOC3Q16853 763 aa7.78□□□□□ -1.16
ATPAF1-209ENST00000529214 C20orf194Q5TEA3 1177 aa7.78□□□□□ -1.16
ATPAF1-209ENST00000529214 LARGE2Q8N3Y3 721 aa7.78□□□□□ -1.16
ATPAF1-209ENST00000529214 JDP2Q8WYK2 163 aa7.78□□□□□ -1.16
ATPAF1-209ENST00000529214 EYA3Q99504 573 aa7.78□□□□□ -1.16
ATPAF1-209ENST00000529214 PUS3Q9BZE2 481 aaKnown RBP7.78□□□□□ -1.16
ATPAF1-209ENST00000529214 ZC3H12CQ9C0D7 883 aaKnown RBP7.78□□□□□ -1.16
ATPAF1-209ENST00000529214 CNNM1Q9NRU3 951 aa7.78□□□□□ -1.16
ATPAF1-209ENST00000529214 GGA1Q9UJY5 639 aa7.78□□□□□ -1.16
ATPAF1-209ENST00000529214 PCDHB8Q9UN66 801 aa7.78□□□□□ -1.16
ATPAF1-209ENST00000529214 LEMD3Q9Y2U8 911 aa7.78□□□□□ -1.16
ATPAF1-209ENST00000529214 CACNA1SQ13698 1873 aa7.78□□□□□ -1.16
ATPAF1-209ENST00000529214 RIMBP2O15034 1052 aa7.77□□□□□ -1.17
ATPAF1-209ENST00000529214 TAF5LO75529 589 aa7.77□□□□□ -1.17
ATPAF1-209ENST00000529214 UFL1O94874 794 aa7.77□□□□□ -1.17
ATPAF1-209ENST00000529214 ATP8B2P98198 1209 aa7.77□□□□□ -1.17
ATPAF1-209ENST00000529214 LRRC24Q50LG9 513 aa7.77□□□□□ -1.17
ATPAF1-209ENST00000529214 DPY19L2Q6NUT2 758 aa7.77□□□□□ -1.17
ATPAF1-209ENST00000529214 SND1Q7KZF4 910 aaKnown RBP eCLIP7.77□□□□□ -1.17
ATPAF1-209ENST00000529214 EFCAB3Q8N7B9 438 aa7.77□□□□□ -1.17
ATPAF1-209ENST00000529214 ZNF784Q8NCA9 323 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms