RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 RNF123Q5XPI4 1314 aa7.44□□□□□ -1.22
CHKA-204ENST00000528235 UBR2Q8IWV8 1755 aa7.43□□□□□ -1.22
CHKA-204ENST00000528235 CFAP99D6REC4 459 aa7.43□□□□□ -1.22
CHKA-204ENST00000528235 LMOD1P29536 600 aaPredicted RBP7.43□□□□□ -1.22
CHKA-204ENST00000528235 ST5P78524 1137 aa7.43□□□□□ -1.22
CHKA-204ENST00000528235 CCDC93Q567U6 631 aa7.43□□□□□ -1.22
CHKA-204ENST00000528235 STYK1Q6J9G0 422 aa7.43□□□□□ -1.22
CHKA-204ENST00000528235 PRR5LQ6MZQ0 368 aa7.43□□□□□ -1.22
CHKA-204ENST00000528235 PRPF40BQ6NWY9 871 aaKnown RBP7.43□□□□□ -1.22
CHKA-204ENST00000528235 FAM174AQ8TBP5 190 aa7.43□□□□□ -1.22
CHKA-204ENST00000528235 MASTLQ96GX5 879 aa7.43□□□□□ -1.22
CHKA-204ENST00000528235 POLKQ9UBT6 870 aa7.43□□□□□ -1.22
CHKA-204ENST00000528235 ZNF330Q9Y3S2 320 aaPredicted RBP7.43□□□□□ -1.22
CHKA-204ENST00000528235 PCDHB15Q9Y5E8 787 aa7.43□□□□□ -1.22
CHKA-204ENST00000528235 TLL2Q9Y6L7 1015 aa7.43□□□□□ -1.22
CHKA-204ENST00000528235 BCORQ6W2J9 1755 aa7.43□□□□□ -1.22
CHKA-204ENST00000528235 AOC2O75106 756 aa7.42□□□□□ -1.22
CHKA-204ENST00000528235 BMP1P13497 986 aa7.42□□□□□ -1.22
CHKA-204ENST00000528235 TNNT2P45379 298 aaPredicted RBP7.42□□□□□ -1.22
CHKA-204ENST00000528235 NNTQ13423 1086 aa7.42□□□□□ -1.22
CHKA-204ENST00000528235 TBC1D9BQ66K14 1250 aa7.42□□□□□ -1.22
CHKA-204ENST00000528235 CNBD1Q8NA66 436 aa7.42□□□□□ -1.22
CHKA-204ENST00000528235 SETDB2Q96T68 719 aa7.42□□□□□ -1.22
CHKA-204ENST00000528235 GJA3Q9Y6H8 435 aa7.42□□□□□ -1.22
CHKA-204ENST00000528235 ZNF541Q9H0D2 1346 aa7.42□□□□□ -1.22
CHKA-204ENST00000528235 STARD3NLO95772 234 aa7.41□□□□□ -1.22
CHKA-204ENST00000528235 SRGNP10124 158 aa7.41□□□□□ -1.22
CHKA-204ENST00000528235 SOX10P56693 466 aa7.41□□□□□ -1.22
CHKA-204ENST00000528235 FKBP4Q02790 459 aaKnown RBP eCLIP7.41□□□□□ -1.22
CHKA-204ENST00000528235 SLC39A6Q13433 755 aa7.41□□□□□ -1.22
CHKA-204ENST00000528235 TRIM46Q7Z4K8 759 aa7.41□□□□□ -1.22
CHKA-204ENST00000528235 NPAS3Q8IXF0 933 aa7.41□□□□□ -1.22
CHKA-204ENST00000528235 GPC2Q8N158 579 aa7.41□□□□□ -1.22
CHKA-204ENST00000528235 JDP2Q8WYK2 163 aa7.41□□□□□ -1.22
CHKA-204ENST00000528235 SLC52A2Q9HAB3 445 aa7.41□□□□□ -1.22
CHKA-204ENST00000528235 ZNF277Q9NRM2 450 aaPredicted RBP7.41□□□□□ -1.22
CHKA-204ENST00000528235 NXF1Q9UBU9 619 aaKnown RBP7.41□□□□□ -1.22
CHKA-204ENST00000528235 STK17AQ9UEE5 414 aa7.41□□□□□ -1.22
CHKA-204ENST00000528235 IARSP41252 1262 aaKnown RBP7.4□□□□□ -1.22
CHKA-204ENST00000528235 EIF6P56537 245 aaKnown RBP7.4□□□□□ -1.22
CHKA-204ENST00000528235 FMR1Q06787 632 aaKnown RBP eCLIP7.4□□□□□ -1.22
CHKA-204ENST00000528235 PDE4DQ08499 809 aa7.4□□□□□ -1.22
CHKA-204ENST00000528235 AGERQ15109 404 aa7.4□□□□□ -1.22
CHKA-204ENST00000528235 CSPP1Q1MSJ5 1256 aa7.4□□□□□ -1.22
CHKA-204ENST00000528235 RTKN2Q8IZC4 609 aa7.4□□□□□ -1.22
CHKA-204ENST00000528235 TSC1Q92574 1164 aa7.4□□□□□ -1.22
CHKA-204ENST00000528235 CARD14Q9BXL6 1004 aa7.4□□□□□ -1.22
CHKA-204ENST00000528235 TBC1D2BQ9UPU7 963 aa7.4□□□□□ -1.22
CHKA-204ENST00000528235 FZD9O00144 591 aa7.39□□□□□ -1.23
CHKA-204ENST00000528235 ADH1CP00326 375 aa7.39□□□□□ -1.23
CHKA-204ENST00000528235 F12P00748 615 aaPredicted RBP7.39□□□□□ -1.23
CHKA-204ENST00000528235 EIF5P55010 431 aaKnown RBP7.39□□□□□ -1.23
CHKA-204ENST00000528235 BRPF1P55201 1214 aaPredicted RBP7.39□□□□□ -1.23
CHKA-204ENST00000528235 SCARF1Q14162 830 aa7.39□□□□□ -1.23
CHKA-204ENST00000528235 TUSC1Q2TAM9 212 aa7.39□□□□□ -1.23
CHKA-204ENST00000528235 AKAP4Q5JQC9 854 aa7.39□□□□□ -1.23
CHKA-204ENST00000528235 CST9Q5W186 159 aa7.39□□□□□ -1.23
CHKA-204ENST00000528235 BPHLQ86WA6 291 aaPredicted RBP7.39□□□□□ -1.23
CHKA-204ENST00000528235 TTC5Q8N0Z6 440 aa7.39□□□□□ -1.23
CHKA-204ENST00000528235 SYNE4Q8N205 404 aa7.39□□□□□ -1.23
CHKA-204ENST00000528235 ARMC2Q8NEN0 867 aa7.39□□□□□ -1.23
CHKA-204ENST00000528235 GCC1Q96CN9 775 aa7.39□□□□□ -1.23
CHKA-204ENST00000528235 MAP10Q9P2G4 905 aa7.39□□□□□ -1.23
CHKA-204ENST00000528235 TRAF5O00463 557 aa7.38□□□□□ -1.23
CHKA-204ENST00000528235 NEFLP07196 543 aa7.38□□□□□ -1.23
CHKA-204ENST00000528235 NPR1P16066 1061 aa7.38□□□□□ -1.23
CHKA-204ENST00000528235 ALDH1B1P30837 517 aa7.38□□□□□ -1.23
CHKA-204ENST00000528235 WDR4P57081 412 aaKnown RBP7.38□□□□□ -1.23
CHKA-204ENST00000528235 ARID5BQ14865 1188 aa7.38□□□□□ -1.23
CHKA-204ENST00000528235 MYSM1Q5VVJ2 828 aa7.38□□□□□ -1.23
CHKA-204ENST00000528235 CIAPIN1Q6FI81 312 aa7.38□□□□□ -1.23
CHKA-204ENST00000528235 SULT6B1Q6IMI4 303 aa7.38□□□□□ -1.23
CHKA-204ENST00000528235 USP50Q70EL3 339 aaPredicted RBP7.38□□□□□ -1.23
CHKA-204ENST00000528235 AEBP1Q8IUX7 1158 aa7.38□□□□□ -1.23
CHKA-204ENST00000528235 ZFP42Q96MM3 310 aa7.38□□□□□ -1.23
CHKA-204ENST00000528235 CDK15Q96Q40 435 aa7.38□□□□□ -1.23
CHKA-204ENST00000528235 LGR6Q9HBX8 967 aa7.38□□□□□ -1.23
CHKA-204ENST00000528235 NUP98P52948 1817 aa7.38□□□□□ -1.23
CHKA-204ENST00000528235 RNMTO43148 476 aaKnown RBP7.37□□□□□ -1.23
CHKA-204ENST00000528235 CELF2O95319 508 aaKnown RBP7.37□□□□□ -1.23
CHKA-204ENST00000528235 EPS15P42566 896 aa7.37□□□□□ -1.23
CHKA-204ENST00000528235 NR5A1Q13285 461 aa7.37□□□□□ -1.23
CHKA-204ENST00000528235 MRPL14Q6P1L8 145 aaKnown RBP7.37□□□□□ -1.23
CHKA-204ENST00000528235 SAPCD2Q86UD0 394 aa7.37□□□□□ -1.23
CHKA-204ENST00000528235 NBPF5PQ86XG9 351 aaPredicted RBP7.37□□□□□ -1.23
CHKA-204ENST00000528235 NBPF15Q8N660 670 aa7.37□□□□□ -1.23
CHKA-204ENST00000528235 HELBQ8NG08 1087 aaPredicted RBP7.37□□□□□ -1.23
CHKA-204ENST00000528235 C7orf43Q8WVR3 580 aa7.37□□□□□ -1.23
CHKA-204ENST00000528235 FOXJ1Q92949 421 aa7.37□□□□□ -1.23
CHKA-204ENST00000528235 IRF7Q92985 503 aa7.37□□□□□ -1.23
CHKA-204ENST00000528235 HHIPL1Q96JK4 782 aa7.37□□□□□ -1.23
CHKA-204ENST00000528235 TEX13AQ9BXU3 409 aaPredicted RBP7.37□□□□□ -1.23
CHKA-204ENST00000528235 RSPH6AQ9H0K4 717 aa7.37□□□□□ -1.23
CHKA-204ENST00000528235 ZNF408Q9H9D4 720 aa7.37□□□□□ -1.23
CHKA-204ENST00000528235 SIPA1L3O60292 1781 aaPredicted RBP7.37□□□□□ -1.23
CHKA-204ENST00000528235 TIMP2P16035 220 aa7.36□□□□□ -1.23
CHKA-204ENST00000528235 GTF2E1P29083 439 aaPredicted RBP7.36□□□□□ -1.23
CHKA-204ENST00000528235 IL6STP40189 918 aaPredicted RBP7.36□□□□□ -1.23
CHKA-204ENST00000528235 NOGQ13253 232 aa7.36□□□□□ -1.23
CHKA-204ENST00000528235 OLFM4Q6UX06 510 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms