RNA–Protein interactions for RNA: ENST00000527718.1

PABPC4-222, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-222	ENST00000527718	SSFA2	P28290	1259 aa		7.5	□□□□□ -1.21
PABPC4-222	ENST00000527718	RFX5	P48382	616 aa	Predicted RBP	7.5	□□□□□ -1.21
PABPC4-222	ENST00000527718	ST5	P78524	1137 aa		7.5	□□□□□ -1.21
PABPC4-222	ENST00000527718	ATP2B3	Q16720	1220 aa		7.5	□□□□□ -1.21
PABPC4-222	ENST00000527718	CAVIN4	Q5BKX8	364 aa		7.5	□□□□□ -1.21
PABPC4-222	ENST00000527718	INTS5	Q6P9B9	1019 aa	Known RBP	7.5	□□□□□ -1.21
PABPC4-222	ENST00000527718	TMC4	Q7Z404	712 aa		7.5	□□□□□ -1.21
PABPC4-222	ENST00000527718	NBPF5P	Q86XG9	351 aa	Predicted RBP	7.5	□□□□□ -1.21
PABPC4-222	ENST00000527718	CCDC125	Q86Z20	511 aa		7.5	□□□□□ -1.21
PABPC4-222	ENST00000527718	ANKRD18A	Q8IVF6	992 aa		7.5	□□□□□ -1.21
PABPC4-222	ENST00000527718	ANKK1	Q8NFD2	765 aa		7.5	□□□□□ -1.21
PABPC4-222	ENST00000527718	TTLL11	Q8NHH1	800 aa		7.5	□□□□□ -1.21
PABPC4-222	ENST00000527718	EAF2	Q96CJ1	260 aa	Predicted RBP	7.5	□□□□□ -1.21
PABPC4-222	ENST00000527718	KAZALD1	Q96I82	304 aa		7.5	□□□□□ -1.21
PABPC4-222	ENST00000527718	ZSCAN31	Q96LW9	406 aa	Predicted RBP	7.5	□□□□□ -1.21
PABPC4-222	ENST00000527718	TM6SF1	Q9BZW5	370 aa		7.5	□□□□□ -1.21
PABPC4-222	ENST00000527718	CCDC8	Q9H0W5	538 aa	Predicted RBP	7.5	□□□□□ -1.21
PABPC4-222	ENST00000527718	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	7.5	□□□□□ -1.21
PABPC4-222	ENST00000527718	PCDHGA10	Q9Y5H3	936 aa		7.5	□□□□□ -1.21
PABPC4-222	ENST00000527718	DOT1L	Q8TEK3	1739 aa		7.49	□□□□□ -1.21
PABPC4-222	ENST00000527718	TOGARAM1	Q9Y4F4	1720 aa		7.49	□□□□□ -1.21
PABPC4-222	ENST00000527718		A0A1B0GUL7	405 aa		7.49	□□□□□ -1.21
PABPC4-222	ENST00000527718	SOWAHB	A6NEL2	793 aa		7.49	□□□□□ -1.21
PABPC4-222	ENST00000527718	DDX11L8	A8MPP1	907 aa		7.49	□□□□□ -1.21
PABPC4-222	ENST00000527718	GNPAT	O15228	680 aa		7.49	□□□□□ -1.21
PABPC4-222	ENST00000527718	TRIM37	O94972	964 aa		7.49	□□□□□ -1.21
PABPC4-222	ENST00000527718	CAMTA2	O94983	1202 aa		7.49	□□□□□ -1.21
PABPC4-222	ENST00000527718	NT5C2	P49902	561 aa		7.49	□□□□□ -1.21
PABPC4-222	ENST00000527718	MCMDC2	Q4G0Z9	681 aa		7.49	□□□□□ -1.21
PABPC4-222	ENST00000527718	CWC27	Q6UX04	472 aa	Known RBP	7.49	□□□□□ -1.21
PABPC4-222	ENST00000527718	DDX46	Q7L014	1031 aa	Known RBP	7.49	□□□□□ -1.21
PABPC4-222	ENST00000527718	VPS37D	Q86XT2	251 aa		7.49	□□□□□ -1.21
PABPC4-222	ENST00000527718	CERS3	Q8IU89	383 aa		7.49	□□□□□ -1.21
PABPC4-222	ENST00000527718	KBTBD3	Q8NAB2	608 aa		7.49	□□□□□ -1.21
PABPC4-222	ENST00000527718	OTUD7A	Q8TE49	926 aa	Predicted RBP	7.49	□□□□□ -1.21
PABPC4-222	ENST00000527718	IL17RA	Q96F46	866 aa		7.49	□□□□□ -1.21
PABPC4-222	ENST00000527718	DNAJC2	Q99543	621 aa	Known RBP	7.49	□□□□□ -1.21
PABPC4-222	ENST00000527718	TBC1D2	Q9BYX2	928 aa		7.49	□□□□□ -1.21
PABPC4-222	ENST00000527718	SH2B1	Q9NRF2	756 aa	Predicted RBP	7.49	□□□□□ -1.21
PABPC4-222	ENST00000527718	PAG1	Q9NWQ8	432 aa		7.49	□□□□□ -1.21
PABPC4-222	ENST00000527718	ATP6V1D	Q9Y5K8	247 aa		7.49	□□□□□ -1.21
PABPC4-222	ENST00000527718	CYP46A1	Q9Y6A2	500 aa		7.49	□□□□□ -1.21
PABPC4-222	ENST00000527718	CARMIL3	Q8ND23	1372 aa		7.48	□□□□□ -1.21
PABPC4-222	ENST00000527718	SEMA3E	O15041	775 aa		7.48	□□□□□ -1.21
PABPC4-222	ENST00000527718	PDE8B	O95263	885 aa		7.48	□□□□□ -1.21
PABPC4-222	ENST00000527718	HSPA4	P34932	840 aa		7.48	□□□□□ -1.21
PABPC4-222	ENST00000527718	MAP3K12	Q12852	859 aa		7.48	□□□□□ -1.21
PABPC4-222	ENST00000527718	SF3B2	Q13435	895 aa	Known RBP	7.48	□□□□□ -1.21
PABPC4-222	ENST00000527718	SF3B3	Q15393	1217 aa	Known RBP	7.48	□□□□□ -1.21
PABPC4-222	ENST00000527718	CSPP1	Q1MSJ5	1256 aa		7.48	□□□□□ -1.21
PABPC4-222	ENST00000527718	SKOR2	Q2VWA4	1001 aa	Predicted RBP	7.48	□□□□□ -1.21
PABPC4-222	ENST00000527718	SLC10A5	Q5PT55	438 aa		7.48	□□□□□ -1.21
PABPC4-222	ENST00000527718	ZGPAT	Q8N5A5	531 aa	Known RBP	7.48	□□□□□ -1.21
PABPC4-222	ENST00000527718	INTS4	Q96HW7	963 aa	Known RBP	7.48	□□□□□ -1.21
PABPC4-222	ENST00000527718	BOLA2	Q9H3K6	86 aa		7.48	□□□□□ -1.21
PABPC4-222	ENST00000527718	TNS1	Q9HBL0	1735 aa	Known RBP	7.48	□□□□□ -1.21
PABPC4-222	ENST00000527718	SNRK	Q9NRH2	765 aa		7.48	□□□□□ -1.21
PABPC4-222	ENST00000527718	ITGB4	P16144	1822 aa		7.48	□□□□□ -1.21
PABPC4-222	ENST00000527718	AFDN	P55196	1824 aa	Known RBP	7.48	□□□□□ -1.21
PABPC4-222	ENST00000527718	ZNF609	O15014	1411 aa		7.47	□□□□□ -1.21
PABPC4-222	ENST00000527718	GNAT2	P19087	354 aa		7.47	□□□□□ -1.21
PABPC4-222	ENST00000527718	COL9A1	P20849	921 aa		7.47	□□□□□ -1.21
PABPC4-222	ENST00000527718	PDC	P20941	246 aa		7.47	□□□□□ -1.21
PABPC4-222	ENST00000527718	NEK4	P51957	841 aa		7.47	□□□□□ -1.21
PABPC4-222	ENST00000527718	FGD1	P98174	961 aa		7.47	□□□□□ -1.21
PABPC4-222	ENST00000527718	TRDN	Q13061	729 aa		7.47	□□□□□ -1.21
PABPC4-222	ENST00000527718	ITPK1	Q13572	414 aa		7.47	□□□□□ -1.21
PABPC4-222	ENST00000527718	UBE4A	Q14139	1066 aa		7.47	□□□□□ -1.21
PABPC4-222	ENST00000527718	HLF	Q16534	295 aa		7.47	□□□□□ -1.21
PABPC4-222	ENST00000527718	PROX2	Q3B8N5	592 aa		7.47	□□□□□ -1.21
PABPC4-222	ENST00000527718	EPHA10	Q5JZY3	1008 aa		7.47	□□□□□ -1.21
PABPC4-222	ENST00000527718	PTF1A	Q7RTS3	328 aa		7.47	□□□□□ -1.21
PABPC4-222	ENST00000527718	DEFB132	Q7Z7B7	95 aa		7.47	□□□□□ -1.21
PABPC4-222	ENST00000527718	FBXW7	Q969H0	707 aa		7.47	□□□□□ -1.21
PABPC4-222	ENST00000527718	SLC4A9	Q96Q91	983 aa		7.47	□□□□□ -1.21
PABPC4-222	ENST00000527718	DSCC1	Q9BVC3	393 aa		7.47	□□□□□ -1.21
PABPC4-222	ENST00000527718	NACAP1	Q9BZK3	213 aa		7.47	□□□□□ -1.21
PABPC4-222	ENST00000527718	BSDC1	Q9NW68	430 aa	Predicted RBP	7.47	□□□□□ -1.21
PABPC4-222	ENST00000527718	DBNL	Q9UJU6	430 aa	Known RBP	7.47	□□□□□ -1.21
PABPC4-222	ENST00000527718	NHS	Q6T4R5	1651 aa		7.47	□□□□□ -1.21
PABPC4-222	ENST00000527718	CCDC171	Q6TFL3	1326 aa		7.47	□□□□□ -1.21
PABPC4-222	ENST00000527718	NUP188	Q5SRE5	1749 aa		7.47	□□□□□ -1.21
PABPC4-222	ENST00000527718	PLSCR1	O15162	318 aa		7.46	□□□□□ -1.22
PABPC4-222	ENST00000527718	RNF113A	O15541	343 aa	Known RBP	7.46	□□□□□ -1.22
PABPC4-222	ENST00000527718	KCNQ2	O43526	872 aa		7.46	□□□□□ -1.22
PABPC4-222	ENST00000527718	NTSR2	O95665	410 aa		7.46	□□□□□ -1.22
PABPC4-222	ENST00000527718	APBA3	O96018	575 aa		7.46	□□□□□ -1.22
PABPC4-222	ENST00000527718	BAG6	P46379	1132 aa		7.46	□□□□□ -1.22
PABPC4-222	ENST00000527718	FKBP4	Q02790	459 aa	Known RBP eCLIP	7.46	□□□□□ -1.22
PABPC4-222	ENST00000527718	WASHC4	Q2M389	1173 aa		7.46	□□□□□ -1.22
PABPC4-222	ENST00000527718	VPS53	Q5VIR6	699 aa		7.46	□□□□□ -1.22
PABPC4-222	ENST00000527718	SUSD4	Q5VX71	490 aa		7.46	□□□□□ -1.22
PABPC4-222	ENST00000527718	SPTY2D1	Q68D10	685 aa	Predicted RBP	7.46	□□□□□ -1.22
PABPC4-222	ENST00000527718	BLOC1S2	Q6QNY1	142 aa		7.46	□□□□□ -1.22
PABPC4-222	ENST00000527718	ATG9A	Q7Z3C6	839 aa		7.46	□□□□□ -1.22
PABPC4-222	ENST00000527718	NLGN1	Q8N2Q7	840 aa		7.46	□□□□□ -1.22
PABPC4-222	ENST00000527718	CNBD1	Q8NA66	436 aa		7.46	□□□□□ -1.22
PABPC4-222	ENST00000527718	XAGE2	Q96GT9	111 aa		7.46	□□□□□ -1.22
PABPC4-222	ENST00000527718	DBNDD2	Q9BQY9	259 aa		7.46	□□□□□ -1.22
PABPC4-222	ENST00000527718	GREM2	Q9H772	168 aa		7.46	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 154.1 ms