RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 RSBN1LQ6PCB5 846 aaPredicted RBP11.11□□□□□ -0.63
CCDC90B-208ENST00000527025 PNMA8AQ86V59 439 aaPredicted RBP11.11□□□□□ -0.63
CCDC90B-208ENST00000527025 MICALL2Q8IY33 904 aa11.11□□□□□ -0.63
CCDC90B-208ENST00000527025 DPF2Q92785 391 aa11.11□□□□□ -0.63
CCDC90B-208ENST00000527025 COA1Q9GZY4 146 aa11.11□□□□□ -0.63
CCDC90B-208ENST00000527025 CD209Q9NNX6 404 aa11.11□□□□□ -0.63
CCDC90B-208ENST00000527025 ADARB2Q9NS39 739 aaKnown RBP11.11□□□□□ -0.63
CCDC90B-208ENST00000527025 PGAP2Q9UHJ9 254 aa11.11□□□□□ -0.63
CCDC90B-208ENST00000527025 USP17L3A6NCW0 530 aa11.1□□□□□ -0.63
CCDC90B-208ENST00000527025 USP17L4A6NCW7 530 aa11.1□□□□□ -0.63
CCDC90B-208ENST00000527025 EYA2O00167 538 aa11.1□□□□□ -0.63
CCDC90B-208ENST00000527025 TRAF5O00463 557 aa11.1□□□□□ -0.63
CCDC90B-208ENST00000527025 LMOD1P29536 600 aaPredicted RBP11.1□□□□□ -0.63
CCDC90B-208ENST00000527025 GYG1P46976 350 aa11.1□□□□□ -0.63
CCDC90B-208ENST00000527025 TBC1D10BQ4KMP7 808 aaPredicted RBP11.1□□□□□ -0.63
CCDC90B-208ENST00000527025 USP50Q70EL3 339 aaPredicted RBP11.1□□□□□ -0.63
CCDC90B-208ENST00000527025 USP17L1Q7RTZ2 530 aa11.1□□□□□ -0.63
CCDC90B-208ENST00000527025 DZIP1LQ8IYY4 767 aaKnown RBP11.1□□□□□ -0.63
CCDC90B-208ENST00000527025 CNTROBQ8N137 903 aa11.1□□□□□ -0.63
CCDC90B-208ENST00000527025 CERS5Q8N5B7 392 aa11.1□□□□□ -0.63
CCDC90B-208ENST00000527025 FAM84BQ96KN1 310 aaPredicted RBP11.1□□□□□ -0.63
CCDC90B-208ENST00000527025 SCUBE2Q9NQ36 999 aa11.1□□□□□ -0.63
CCDC90B-208ENST00000527025 JAG2Q9Y219 1238 aa11.1□□□□□ -0.63
CCDC90B-208ENST00000527025 MROH5Q6ZUA9 1318 aa11.09□□□□□ -0.63
CCDC90B-208ENST00000527025 PNMA6EA0A0J9YXQ4 647 aa11.09□□□□□ -0.63
CCDC90B-208ENST00000527025 G3V3G9 751 aa11.09□□□□□ -0.63
CCDC90B-208ENST00000527025 PDE8BO95263 885 aa11.09□□□□□ -0.63
CCDC90B-208ENST00000527025 IL1R1P14778 569 aa11.09□□□□□ -0.63
CCDC90B-208ENST00000527025 FGFR2P21802 821 aa11.09□□□□□ -0.63
CCDC90B-208ENST00000527025 KCNJ4P48050 445 aa11.09□□□□□ -0.63
CCDC90B-208ENST00000527025 APLP1P51693 650 aa11.09□□□□□ -0.63
CCDC90B-208ENST00000527025 ZNF280AP59817 542 aaPredicted RBP11.09□□□□□ -0.63
CCDC90B-208ENST00000527025 GTF2IP78347 998 aa11.09□□□□□ -0.63
CCDC90B-208ENST00000527025 MTX1Q13505 466 aa11.09□□□□□ -0.63
CCDC90B-208ENST00000527025 UBE4AQ14139 1066 aa11.09□□□□□ -0.63
CCDC90B-208ENST00000527025 RBM26Q5T8P6 1007 aaKnown RBP11.09□□□□□ -0.63
CCDC90B-208ENST00000527025 DCAF8Q5TAQ9 597 aa11.09□□□□□ -0.63
CCDC90B-208ENST00000527025 C20orf194Q5TEA3 1177 aa11.09□□□□□ -0.63
CCDC90B-208ENST00000527025 SIL1Q9H173 461 aa11.09□□□□□ -0.63
CCDC90B-208ENST00000527025 C1orf115Q9H7X2 142 aa11.09□□□□□ -0.63
CCDC90B-208ENST00000527025 RCAN3Q9UKA8 241 aa11.09□□□□□ -0.63
CCDC90B-208ENST00000527025 ZNF609O15014 1411 aa11.09□□□□□ -0.63
CCDC90B-208ENST00000527025 GNAI3P08754 354 aa11.08□□□□□ -0.64
CCDC90B-208ENST00000527025 RPS12P25398 132 aaKnown RBP11.08□□□□□ -0.64
CCDC90B-208ENST00000527025 GRIK5Q16478 980 aa11.08□□□□□ -0.64
CCDC90B-208ENST00000527025 METTL24Q5JXM2 366 aa11.08□□□□□ -0.64
CCDC90B-208ENST00000527025 STRIP1Q5VSL9 837 aa11.08□□□□□ -0.64
CCDC90B-208ENST00000527025 TTLL5Q6EMB2 1281 aa11.08□□□□□ -0.64
CCDC90B-208ENST00000527025 FBXO33Q7Z6M2 555 aa11.08□□□□□ -0.64
CCDC90B-208ENST00000527025 COPRSQ9NQ92 184 aa11.08□□□□□ -0.64
CCDC90B-208ENST00000527025 PCDHB13Q9Y5F0 798 aa11.08□□□□□ -0.64
CCDC90B-208ENST00000527025 PCDHAC2Q9Y5I4 1007 aa11.08□□□□□ -0.64
CCDC90B-208ENST00000527025 H7C1D1 291 aa11.07□□□□□ -0.64
CCDC90B-208ENST00000527025 SRGAP3O43295 1099 aa11.07□□□□□ -0.64
CCDC90B-208ENST00000527025 GNAI2P04899 355 aa11.07□□□□□ -0.64
CCDC90B-208ENST00000527025 BCAMP50895 628 aa11.07□□□□□ -0.64
CCDC90B-208ENST00000527025 CST9Q5W186 159 aa11.07□□□□□ -0.64
CCDC90B-208ENST00000527025 IFNL1Q8IU54 200 aa11.07□□□□□ -0.64
CCDC90B-208ENST00000527025 AGBL3Q8NEM8 1001 aa11.07□□□□□ -0.64
CCDC90B-208ENST00000527025 TDRD7Q8NHU6 1098 aaKnown RBP11.07□□□□□ -0.64
CCDC90B-208ENST00000527025 FAM163AQ96GL9 167 aaPredicted RBP11.07□□□□□ -0.64
CCDC90B-208ENST00000527025 GLIS2Q9BZE0 524 aaPredicted RBP11.07□□□□□ -0.64
CCDC90B-208ENST00000527025 SCAF8Q9UPN6 1271 aaKnown RBP11.07□□□□□ -0.64
CCDC90B-208ENST00000527025 IQSEC3Q9UPP2 1182 aaPredicted RBP11.07□□□□□ -0.64
CCDC90B-208ENST00000527025 AOX1Q06278 1338 aa11.07□□□□□ -0.64
CCDC90B-208ENST00000527025 CIAO1O76071 339 aa11.06□□□□□ -0.64
CCDC90B-208ENST00000527025 SASH1O94885 1247 aa11.06□□□□□ -0.64
CCDC90B-208ENST00000527025 USP17L8P0C7I0 530 aa11.06□□□□□ -0.64
CCDC90B-208ENST00000527025 HIBADHP31937 336 aaKnown RBP11.06□□□□□ -0.64
CCDC90B-208ENST00000527025 NBPF9Q3BBW0 867 aa11.06□□□□□ -0.64
CCDC90B-208ENST00000527025 ITPRIPQ8IWB1 547 aa11.06□□□□□ -0.64
CCDC90B-208ENST00000527025 FBXW7Q969H0 707 aa11.06□□□□□ -0.64
CCDC90B-208ENST00000527025 ATP8B2P98198 1209 aa11.05□□□□□ -0.64
CCDC90B-208ENST00000527025 SCARF1Q14162 830 aa11.05□□□□□ -0.64
CCDC90B-208ENST00000527025 KIF4BQ2VIQ3 1234 aa11.05□□□□□ -0.64
CCDC90B-208ENST00000527025 ZNF804AQ7Z570 1209 aa11.05□□□□□ -0.64
CCDC90B-208ENST00000527025 USP48Q86UV5 1035 aa11.05□□□□□ -0.64
CCDC90B-208ENST00000527025 KIAA0825Q8IV33 1275 aa11.05□□□□□ -0.64
CCDC90B-208ENST00000527025 FTSJ3Q8IY81 847 aaKnown RBP11.05□□□□□ -0.64
CCDC90B-208ENST00000527025 ZC3H15Q8WU90 426 aaKnown RBP11.05□□□□□ -0.64
CCDC90B-208ENST00000527025 ZBED3Q96IU2 234 aaPredicted RBP11.05□□□□□ -0.64
CCDC90B-208ENST00000527025 MYOZ2Q9NPC6 264 aa11.05□□□□□ -0.64
CCDC90B-208ENST00000527025 COG6Q9Y2V7 657 aa11.05□□□□□ -0.64
CCDC90B-208ENST00000527025 FAM205AQ6ZU69 1335 aa11.05□□□□□ -0.64
CCDC90B-208ENST00000527025 TRPM7Q96QT4 1865 aa11.04□□□□□ -0.64
CCDC90B-208ENST00000527025 ADM5C9JUS6 153 aa11.04□□□□□ -0.64
CCDC90B-208ENST00000527025 ADORA1P30542 326 aa11.04□□□□□ -0.64
CCDC90B-208ENST00000527025 TIMM10P62072 90 aa11.04□□□□□ -0.64
CCDC90B-208ENST00000527025 TFCP2Q12800 502 aa11.04□□□□□ -0.64
CCDC90B-208ENST00000527025 PUM3Q15397 648 aaKnown RBP11.04□□□□□ -0.64
CCDC90B-208ENST00000527025 SSH3Q8TE77 659 aa11.04□□□□□ -0.64
CCDC90B-208ENST00000527025 FBXO3Q9UK99 471 aa11.04□□□□□ -0.64
CCDC90B-208ENST00000527025 COL1A1P02452 1464 aaPredicted RBP11.04□□□□□ -0.64
CCDC90B-208ENST00000527025 F8W031 263 aaPredicted RBP11.03□□□□□ -0.64
CCDC90B-208ENST00000527025 WNT10BO00744 389 aa11.03□□□□□ -0.64
CCDC90B-208ENST00000527025 IL15P40933 162 aaPredicted RBP11.03□□□□□ -0.64
CCDC90B-208ENST00000527025 ANGEL2Q5VTE6 544 aaKnown RBP11.03□□□□□ -0.64
CCDC90B-208ENST00000527025 SIRT2Q8IXJ6 389 aa11.03□□□□□ -0.64
CCDC90B-208ENST00000527025 LPIN2Q92539 896 aa11.03□□□□□ -0.64
CCDC90B-208ENST00000527025 HDAC5Q9UQL6 1122 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms