RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 GPAA1O43292 621 aa20.68■□□□□ 0.9
USH1C-205ENST00000527020 PPFIA3O75145 1194 aa20.68■□□□□ 0.9
USH1C-205ENST00000527020 IL6STP40189 918 aaPredicted RBP20.68■□□□□ 0.9
USH1C-205ENST00000527020 ZNF34Q8IZ26 560 aa20.68■□□□□ 0.9
USH1C-205ENST00000527020 MPNDQ8N594 471 aa20.68■□□□□ 0.9
USH1C-205ENST00000527020 PDE8AO60658 829 aa20.67■□□□□ 0.9
USH1C-205ENST00000527020 FDPSP14324 419 aaKnown RBP20.67■□□□□ 0.9
USH1C-205ENST00000527020 DZIP3Q86Y13 1208 aaKnown RBP20.67■□□□□ 0.9
USH1C-205ENST00000527020 CKAP2LQ8IYA6 745 aa20.67■□□□□ 0.9
USH1C-205ENST00000527020 CFAP45Q9UL16 551 aa20.67■□□□□ 0.9
USH1C-205ENST00000527020 CARMIL3Q8ND23 1372 aa20.67■□□□□ 0.9
USH1C-205ENST00000527020 PDE8BO95263 885 aa20.66■□□□□ 0.9
USH1C-205ENST00000527020 ADD2P35612 726 aa20.66■□□□□ 0.9
USH1C-205ENST00000527020 ANTXR2P58335 489 aa20.66■□□□□ 0.9
USH1C-205ENST00000527020 ILDR1Q86SU0 546 aaPredicted RBP20.66■□□□□ 0.9
USH1C-205ENST00000527020 FTOQ9C0B1 505 aaKnown RBP eCLIP20.66■□□□□ 0.9
USH1C-205ENST00000527020 NAP1L2Q9ULW6 460 aaPredicted RBP20.66■□□□□ 0.9
USH1C-205ENST00000527020 C4AP0C0L4 1744 aa20.66■□□□□ 0.9
USH1C-205ENST00000527020 C4BP0C0L5 1744 aa20.66■□□□□ 0.9
USH1C-205ENST00000527020 NBPF3Q9H094 633 aa20.66■□□□□ 0.9
USH1C-205ENST00000527020 PIH1D3Q9NQM4 214 aaKnown RBP20.66■□□□□ 0.9
USH1C-205ENST00000527020 RCOR1Q9UKL0 485 aa20.66■□□□□ 0.9
USH1C-205ENST00000527020 FAM200AQ8TCP9 573 aa20.65■□□□□ 0.9
USH1C-205ENST00000527020 BICD2Q8TD16 824 aa20.65■□□□□ 0.9
USH1C-205ENST00000527020 AHDC1Q5TGY3 1603 aaPredicted RBP20.65■□□□□ 0.9
USH1C-205ENST00000527020 PRC1O43663 620 aa20.65■□□□□ 0.9
USH1C-205ENST00000527020 CEBPZQ03701 1054 aaKnown RBP20.65■□□□□ 0.9
USH1C-205ENST00000527020 ZNF830Q96NB3 372 aaPredicted RBP20.65■□□□□ 0.9
USH1C-205ENST00000527020 HPS5Q9UPZ3 1129 aa20.65■□□□□ 0.9
USH1C-205ENST00000527020 KIF3AQ9Y496 699 aa20.65■□□□□ 0.9
USH1C-205ENST00000527020 PHLPP1O60346 1717 aa20.64■□□□□ 0.89
USH1C-205ENST00000527020 DOCK2Q92608 1830 aa20.64■□□□□ 0.89
USH1C-205ENST00000527020 ARID4AP29374 1257 aaPredicted RBP20.64■□□□□ 0.89
USH1C-205ENST00000527020 PHKA1P46020 1223 aa20.64■□□□□ 0.89
USH1C-205ENST00000527020 USP28Q96RU2 1077 aa20.64■□□□□ 0.89
USH1C-205ENST00000527020 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.64■□□□□ 0.89
USH1C-205ENST00000527020 GUCY1B3Q02153 619 aa20.63■□□□□ 0.89
USH1C-205ENST00000527020 CCDC102BQ68D86 513 aa20.63■□□□□ 0.89
USH1C-205ENST00000527020 RREB1Q92766 1687 aa20.63■□□□□ 0.89
USH1C-205ENST00000527020 FGFR2P21802 821 aa20.63■□□□□ 0.89
USH1C-205ENST00000527020 EIF5P55010 431 aaKnown RBP20.63■□□□□ 0.89
USH1C-205ENST00000527020 SLC9C2Q5TAH2 1124 aa20.63■□□□□ 0.89
USH1C-205ENST00000527020 NKX2-3Q8TAU0 364 aa20.63■□□□□ 0.89
USH1C-205ENST00000527020 MYH14Q7Z406 1995 aaKnown RBP20.62■□□□□ 0.89
USH1C-205ENST00000527020 NRAPQ86VF7 1730 aa20.62■□□□□ 0.89
USH1C-205ENST00000527020 ANO6Q4KMQ2 910 aa20.62■□□□□ 0.89
USH1C-205ENST00000527020 INTS5Q6P9B9 1019 aaKnown RBP20.62■□□□□ 0.89
USH1C-205ENST00000527020 NCOA7Q8NI08 942 aa20.62■□□□□ 0.89
USH1C-205ENST00000527020 DENND2AQ9ULE3 1009 aa20.62■□□□□ 0.89
USH1C-205ENST00000527020 ZNF213O14771 459 aa20.62■□□□□ 0.89
USH1C-205ENST00000527020 TTF1Q15361 905 aaPredicted RBP20.62■□□□□ 0.89
USH1C-205ENST00000527020 ZSCAN25Q6NSZ9 544 aa20.62■□□□□ 0.89
USH1C-205ENST00000527020 LUZP1Q86V48 1076 aa20.62■□□□□ 0.89
USH1C-205ENST00000527020 TTC12Q9H892 705 aaPredicted RBP20.62■□□□□ 0.89
USH1C-205ENST00000527020 WDR19Q8NEZ3 1342 aa20.61■□□□□ 0.89
USH1C-205ENST00000527020 KLF18A0A0U1RQI7 1052 aa20.61■□□□□ 0.89
USH1C-205ENST00000527020 TPM2P07951 284 aa20.61■□□□□ 0.89
USH1C-205ENST00000527020 PLCB2Q00722 1185 aa20.61■□□□□ 0.89
USH1C-205ENST00000527020 KIAA2012Q0VF49 1180 aa20.61■□□□□ 0.89
USH1C-205ENST00000527020 UBE3CQ15386 1083 aa20.61■□□□□ 0.89
USH1C-205ENST00000527020 CBX8Q9HC52 389 aa20.61■□□□□ 0.89
USH1C-205ENST00000527020 TCRBV5S4A2TA0A5A2 114 aa20.61■□□□□ 0.89
USH1C-205ENST00000527020 TERF1P54274 439 aa20.61■□□□□ 0.89
USH1C-205ENST00000527020 SUSD4Q5VX71 490 aa20.61■□□□□ 0.89
USH1C-205ENST00000527020 ATL3Q6DD88 541 aa20.61■□□□□ 0.89
USH1C-205ENST00000527020 HELBQ8NG08 1087 aaPredicted RBP20.61■□□□□ 0.89
USH1C-205ENST00000527020 CHMP4CQ96CF2 233 aa20.61■□□□□ 0.89
USH1C-205ENST00000527020 GOLPH3LQ9H4A5 285 aa20.61■□□□□ 0.89
USH1C-205ENST00000527020 ZNF532Q9HCE3 1301 aa20.6■□□□□ 0.89
USH1C-205ENST00000527020 PUM3Q15397 648 aaKnown RBP20.6■□□□□ 0.89
USH1C-205ENST00000527020 TBC1D10CQ8IV04 446 aa20.6■□□□□ 0.89
USH1C-205ENST00000527020 WWC3Q9ULE0 1092 aa20.6■□□□□ 0.89
USH1C-205ENST00000527020 R3HCC1Q9Y3T6 440 aaKnown RBP20.6■□□□□ 0.89
USH1C-205ENST00000527020 CHD4Q14839 1912 aa20.6■□□□□ 0.89
USH1C-205ENST00000527020 MROH5Q6ZUA9 1318 aa20.59■□□□□ 0.89
USH1C-205ENST00000527020 GOLGA8BA8MQT2 603 aa20.59■□□□□ 0.89
USH1C-205ENST00000527020 IDH1O75874 414 aaKnown RBP20.59■□□□□ 0.89
USH1C-205ENST00000527020 PDE6AP16499 860 aa20.59■□□□□ 0.89
USH1C-205ENST00000527020 OTUD7BQ6GQQ9 843 aa20.59■□□□□ 0.89
USH1C-205ENST00000527020 RALYLQ86SE5 291 aaKnown RBP20.59■□□□□ 0.89
USH1C-205ENST00000527020 RAB11FIP4Q86YS3 637 aa20.59■□□□□ 0.89
USH1C-205ENST00000527020 CCAR1Q8IX12 1150 aaKnown RBP20.59■□□□□ 0.89
USH1C-205ENST00000527020 LPIN2Q92539 896 aa20.59■□□□□ 0.89
USH1C-205ENST00000527020 AK7Q96M32 723 aa20.59■□□□□ 0.89
USH1C-205ENST00000527020 ZNF396Q96N95 335 aaPredicted RBP20.59■□□□□ 0.89
USH1C-205ENST00000527020 LAMB2P55268 1798 aa20.59■□□□□ 0.89
USH1C-205ENST00000527020 ECM29Q5VYK3 1845 aa20.58■□□□□ 0.89
USH1C-205ENST00000527020 CICQ96RK0 1608 aaPredicted RBP20.58■□□□□ 0.89
USH1C-205ENST00000527020 UQCRFS1P1P0C7P4 283 aa20.58■□□□□ 0.89
USH1C-205ENST00000527020 SNW1Q13573 536 aaKnown RBP20.58■□□□□ 0.89
USH1C-205ENST00000527020 CYB5R4Q7L1T6 521 aa20.58■□□□□ 0.88
USH1C-205ENST00000527020 PIBF1Q8WXW3 757 aa20.58■□□□□ 0.88
USH1C-205ENST00000527020 CCDC87Q9NVE4 849 aa20.58■□□□□ 0.88
USH1C-205ENST00000527020 SNAP23O00161 211 aa20.57■□□□□ 0.88
USH1C-205ENST00000527020 ENGASEQ8NFI3 743 aa20.57■□□□□ 0.88
USH1C-205ENST00000527020 SPATA31A1Q5TZJ5 1347 aa20.57■□□□□ 0.88
USH1C-205ENST00000527020 CRKLP46109 303 aaKnown RBP20.56■□□□□ 0.88
USH1C-205ENST00000527020 SASS6Q6UVJ0 657 aa20.56■□□□□ 0.88
USH1C-205ENST00000527020 STRBPQ96SI9 672 aaKnown RBP20.56■□□□□ 0.88
USH1C-205ENST00000527020 KCNF1Q9H3M0 494 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms