RNA–Protein interactions for RNA: ENST00000524057.3

SORBS3-222, Transcript of sorbin and SH3 domain containing 3, human

TSL 3

Gene SORBS3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS3-222	ENST00000524057	MTFR1	Q15390	333 aa		13.94	□□□□□ -0.18
SORBS3-222	ENST00000524057	TAF1C	Q15572	869 aa	Predicted RBP	13.94	□□□□□ -0.18
SORBS3-222	ENST00000524057	RIC3	Q7Z5B4	369 aa		13.94	□□□□□ -0.18
SORBS3-222	ENST00000524057	BRI3BP	Q8WY22	251 aa		13.94	□□□□□ -0.18
SORBS3-222	ENST00000524057	OPTN	Q96CV9	577 aa		13.94	□□□□□ -0.18
SORBS3-222	ENST00000524057	LRCH3	Q96II8	777 aa		13.94	□□□□□ -0.18
SORBS3-222	ENST00000524057	ARHGAP39	Q9C0H5	1083 aa		13.94	□□□□□ -0.18
SORBS3-222	ENST00000524057	ELP3	Q9H9T3	547 aa		13.94	□□□□□ -0.18
SORBS3-222	ENST00000524057	BSDC1	Q9NW68	430 aa	Predicted RBP	13.94	□□□□□ -0.18
SORBS3-222	ENST00000524057	HYPK	Q9NX55	129 aa		13.94	□□□□□ -0.18
SORBS3-222	ENST00000524057	COL1A1	P02452	1464 aa	Predicted RBP	13.93	□□□□□ -0.18
SORBS3-222	ENST00000524057	NEUROD2	Q15784	382 aa		13.93	□□□□□ -0.18
SORBS3-222	ENST00000524057	UBE2Q1	Q7Z7E8	422 aa		13.93	□□□□□ -0.18
SORBS3-222	ENST00000524057	MTMR14	Q8NCE2	650 aa		13.93	□□□□□ -0.18
SORBS3-222	ENST00000524057	PRMT6	Q96LA8	375 aa	Predicted RBP	13.93	□□□□□ -0.18
SORBS3-222	ENST00000524057	MRS2	Q9HD23	443 aa		13.93	□□□□□ -0.18
SORBS3-222	ENST00000524057	LAMB1	P07942	1786 aa		13.93	□□□□□ -0.18
SORBS3-222	ENST00000524057	ZNF646	O15015	1829 aa	Predicted RBP	13.92	□□□□□ -0.18
SORBS3-222	ENST00000524057	CLRN2	A0PK11	232 aa		13.92	□□□□□ -0.18
SORBS3-222	ENST00000524057	FAM43A	Q8N2R8	423 aa		13.92	□□□□□ -0.18
SORBS3-222	ENST00000524057	CCDC191	Q8NCU4	936 aa		13.92	□□□□□ -0.18
SORBS3-222	ENST00000524057	CNKSR2	Q8WXI2	1034 aa		13.92	□□□□□ -0.18
SORBS3-222	ENST00000524057	CDC5L	Q99459	802 aa	Known RBP	13.92	□□□□□ -0.18
SORBS3-222	ENST00000524057	MYD88	Q99836	296 aa		13.92	□□□□□ -0.18
SORBS3-222	ENST00000524057	LEMD3	Q9Y2U8	911 aa		13.92	□□□□□ -0.18
SORBS3-222	ENST00000524057	NR2E3	Q9Y5X4	410 aa		13.92	□□□□□ -0.18
SORBS3-222	ENST00000524057	ZNF804B	A4D1E1	1349 aa		13.91	□□□□□ -0.18
SORBS3-222	ENST00000524057	LAMA3	Q16787	3333 aa		13.91	□□□□□ -0.18
SORBS3-222	ENST00000524057	CCL15-CCL14	A0A0B4J2E2	113 aa		13.91	□□□□□ -0.18
SORBS3-222	ENST00000524057		A0A1W2PPC1	479 aa		13.91	□□□□□ -0.18
SORBS3-222	ENST00000524057	ZBTB7B	O15156	539 aa	Predicted RBP	13.91	□□□□□ -0.18
SORBS3-222	ENST00000524057	KLRK1	P26718	216 aa		13.91	□□□□□ -0.18
SORBS3-222	ENST00000524057	CCL15	Q16663	113 aa		13.91	□□□□□ -0.18
SORBS3-222	ENST00000524057	CERS5	Q8N5B7	392 aa		13.91	□□□□□ -0.18
SORBS3-222	ENST00000524057	TTLL11	Q8NHH1	800 aa		13.91	□□□□□ -0.18
SORBS3-222	ENST00000524057	HTATIP2	Q9BUP3	242 aa		13.91	□□□□□ -0.18
SORBS3-222	ENST00000524057	LAS1L	Q9Y4W2	734 aa	Known RBP	13.91	□□□□□ -0.18
SORBS3-222	ENST00000524057	AOX1	Q06278	1338 aa		13.9	□□□□□ -0.18
SORBS3-222	ENST00000524057	TLR2	O60603	784 aa		13.9	□□□□□ -0.18
SORBS3-222	ENST00000524057	GNRH1	P01148	92 aa		13.9	□□□□□ -0.18
SORBS3-222	ENST00000524057	HOXB7	P09629	217 aa		13.9	□□□□□ -0.18
SORBS3-222	ENST00000524057	GTF2A2	P52657	109 aa		13.9	□□□□□ -0.18
SORBS3-222	ENST00000524057	LACTB	P83111	547 aa	Predicted RBP	13.9	□□□□□ -0.18
SORBS3-222	ENST00000524057	RASA3	Q14644	834 aa		13.9	□□□□□ -0.18
SORBS3-222	ENST00000524057	KIF22	Q14807	665 aa		13.9	□□□□□ -0.18
SORBS3-222	ENST00000524057	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.9	□□□□□ -0.18
SORBS3-222	ENST00000524057	NKX2-3	Q8TAU0	364 aa		13.9	□□□□□ -0.18
SORBS3-222	ENST00000524057	PHAX	Q9H814	394 aa	Known RBP	13.9	□□□□□ -0.18
SORBS3-222	ENST00000524057	VEZT	Q9HBM0	779 aa		13.9	□□□□□ -0.18
SORBS3-222	ENST00000524057	CWC25	Q9NXE8	425 aa	Predicted RBP	13.9	□□□□□ -0.18
SORBS3-222	ENST00000524057	SPDYE2B	A6NHP3	402 aa		13.89	□□□□□ -0.19
SORBS3-222	ENST00000524057	MYO1B	O43795	1136 aa		13.89	□□□□□ -0.19
SORBS3-222	ENST00000524057	ZNF853	P0CG23	659 aa		13.89	□□□□□ -0.19
SORBS3-222	ENST00000524057	SPDYE6	P0CI01	402 aa		13.89	□□□□□ -0.19
SORBS3-222	ENST00000524057	GJA8	P48165	433 aa		13.89	□□□□□ -0.19
SORBS3-222	ENST00000524057	PRMT2	P55345	433 aa		13.89	□□□□□ -0.19
SORBS3-222	ENST00000524057	CFAP100	Q494V2	611 aa		13.89	□□□□□ -0.19
SORBS3-222	ENST00000524057	GREM2	Q9H772	168 aa		13.89	□□□□□ -0.19
SORBS3-222	ENST00000524057	CD209	Q9NNX6	404 aa		13.89	□□□□□ -0.19
SORBS3-222	ENST00000524057		F8W031	263 aa	Predicted RBP	13.88	□□□□□ -0.19
SORBS3-222	ENST00000524057	ECM2	O94769	699 aa	Predicted RBP	13.88	□□□□□ -0.19
SORBS3-222	ENST00000524057	GJB1	P08034	283 aa		13.88	□□□□□ -0.19
SORBS3-222	ENST00000524057	CTGF	P29279	349 aa		13.88	□□□□□ -0.19
SORBS3-222	ENST00000524057	CTSW	P56202	376 aa		13.88	□□□□□ -0.19
SORBS3-222	ENST00000524057	GOLGA2	Q08379	1002 aa		13.88	□□□□□ -0.19
SORBS3-222	ENST00000524057	LMOD3	Q0VAK6	560 aa		13.88	□□□□□ -0.19
SORBS3-222	ENST00000524057	STAP2	Q9UGK3	403 aa		13.88	□□□□□ -0.19
SORBS3-222	ENST00000524057	MAP3K9	P80192	1104 aa		13.87	□□□□□ -0.19
SORBS3-222	ENST00000524057	DUSP27	Q5VZP5	1158 aa		13.87	□□□□□ -0.19
SORBS3-222	ENST00000524057	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.87	□□□□□ -0.19
SORBS3-222	ENST00000524057	CCL5	P13501	91 aa		13.86	□□□□□ -0.19
SORBS3-222	ENST00000524057	VGLL4	Q14135	290 aa		13.86	□□□□□ -0.19
SORBS3-222	ENST00000524057	CDAN1	Q8IWY9	1227 aa		13.86	□□□□□ -0.19
SORBS3-222	ENST00000524057	METTL22	Q9BUU2	404 aa	Predicted RBP	13.86	□□□□□ -0.19
SORBS3-222	ENST00000524057	ANKRD2	Q9GZV1	360 aa		13.86	□□□□□ -0.19
SORBS3-222	ENST00000524057	RNF208	Q9H0X6	261 aa		13.86	□□□□□ -0.19
SORBS3-222	ENST00000524057	SRRD	Q9UH36	339 aa		13.86	□□□□□ -0.19
SORBS3-222	ENST00000524057	BTBD19	C9JJ37	291 aa		13.85	□□□□□ -0.19
SORBS3-222	ENST00000524057	WDHD1	O75717	1129 aa	Predicted RBP	13.85	□□□□□ -0.19
SORBS3-222	ENST00000524057	GRK4	P32298	578 aa		13.85	□□□□□ -0.19
SORBS3-222	ENST00000524057	C17orf99	Q6UX52	265 aa		13.85	□□□□□ -0.19
SORBS3-222	ENST00000524057	DEFB123	Q8N688	67 aa		13.85	□□□□□ -0.19
SORBS3-222	ENST00000524057	TEPSIN	Q96N21	525 aa		13.85	□□□□□ -0.19
SORBS3-222	ENST00000524057	RIPOR2	Q9Y4F9	1068 aa		13.85	□□□□□ -0.19
SORBS3-222	ENST00000524057	UNC80	Q8N2C7	3258 aa		13.85	□□□□□ -0.19
SORBS3-222	ENST00000524057	ZSWIM8	A7E2V4	1837 aa		13.85	□□□□□ -0.19
SORBS3-222	ENST00000524057	SNAP23	O00161	211 aa		13.84	□□□□□ -0.19
SORBS3-222	ENST00000524057	EVI5	O60447	810 aa		13.84	□□□□□ -0.19
SORBS3-222	ENST00000524057	IGHMBP2	P38935	993 aa	Known RBP	13.84	□□□□□ -0.19
SORBS3-222	ENST00000524057	PSMC4	P43686	418 aa		13.84	□□□□□ -0.19
SORBS3-222	ENST00000524057	RBM5	P52756	815 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
SORBS3-222	ENST00000524057	GPR153	Q6NV75	609 aa		13.84	□□□□□ -0.19
SORBS3-222	ENST00000524057		Q7L0L9	218 aa		13.84	□□□□□ -0.19
SORBS3-222	ENST00000524057	WWC1	Q8IX03	1113 aa		13.84	□□□□□ -0.19
SORBS3-222	ENST00000524057	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
SORBS3-222	ENST00000524057	U2AF1L4	Q8WU68	220 aa	Known RBP	13.84	□□□□□ -0.19
SORBS3-222	ENST00000524057	TRIM47	Q96LD4	638 aa		13.84	□□□□□ -0.19
SORBS3-222	ENST00000524057	MBIP	Q9NS73	344 aa		13.84	□□□□□ -0.19
SORBS3-222	ENST00000524057	STXBP5L	Q9Y2K9	1186 aa		13.84	□□□□□ -0.19
SORBS3-222	ENST00000524057	FARP2	O94887	1054 aa	Predicted RBP	13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms