RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 M0R082 166 aa6.26□□□□□ -1.41
SKP1-212ENST00000523966 SLURP2P0DP57 97 aa6.26□□□□□ -1.41
SKP1-212ENST00000523966 HDLBPQ00341 1268 aaKnown RBP6.26□□□□□ -1.41
SKP1-212ENST00000523966 FANCCQ00597 558 aa6.26□□□□□ -1.41
SKP1-212ENST00000523966 PCDH1Q08174 1060 aa6.26□□□□□ -1.41
SKP1-212ENST00000523966 IKBKEQ14164 716 aa6.26□□□□□ -1.41
SKP1-212ENST00000523966 WFDC8Q8IUA0 241 aa6.26□□□□□ -1.41
SKP1-212ENST00000523966 C3orf58Q8NDZ4 430 aa6.26□□□□□ -1.41
SKP1-212ENST00000523966 ZNF417Q8TAU3 575 aa6.26□□□□□ -1.41
SKP1-212ENST00000523966 ZNF587Q96SQ5 575 aaPredicted RBP6.26□□□□□ -1.41
SKP1-212ENST00000523966 MDFIQ99750 246 aa6.26□□□□□ -1.41
SKP1-212ENST00000523966 NOC4LQ9BVI4 516 aaKnown RBP6.26□□□□□ -1.41
SKP1-212ENST00000523966 ADAM19Q9H013 955 aa6.26□□□□□ -1.41
SKP1-212ENST00000523966 ZNF576Q9H609 170 aa6.26□□□□□ -1.41
SKP1-212ENST00000523966 PPME1Q9Y570 386 aa6.26□□□□□ -1.41
SKP1-212ENST00000523966 CELA2BP08218 269 aaPredicted RBP6.25□□□□□ -1.41
SKP1-212ENST00000523966 CDC25BP30305 580 aa6.25□□□□□ -1.41
SKP1-212ENST00000523966 LYPD4Q6UWN0 246 aa6.25□□□□□ -1.41
SKP1-212ENST00000523966 TREML4Q6UXN2 200 aa6.25□□□□□ -1.41
SKP1-212ENST00000523966 NT5DC4Q86YG4 428 aa6.25□□□□□ -1.41
SKP1-212ENST00000523966 ZNF775Q96BV0 537 aaPredicted RBP6.25□□□□□ -1.41
SKP1-212ENST00000523966 CCSER2Q9H7U1 834 aa6.25□□□□□ -1.41
SKP1-212ENST00000523966 SH2B1Q9NRF2 756 aaPredicted RBP6.25□□□□□ -1.41
SKP1-212ENST00000523966 TMEM39AQ9NV64 488 aa6.25□□□□□ -1.41
SKP1-212ENST00000523966 H3BRJ5 948 aa6.24□□□□□ -1.41
SKP1-212ENST00000523966 FBXO24O75426 580 aa6.24□□□□□ -1.41
SKP1-212ENST00000523966 ALBP02768 609 aa6.24□□□□□ -1.41
SKP1-212ENST00000523966 LDLRAD1Q5T700 205 aa6.24□□□□□ -1.41
SKP1-212ENST00000523966 USP48Q86UV5 1035 aa6.24□□□□□ -1.41
SKP1-212ENST00000523966 ZNF654Q8IZM8 581 aa6.24□□□□□ -1.41
SKP1-212ENST00000523966 SVOPQ8N4V2 548 aa6.24□□□□□ -1.41
SKP1-212ENST00000523966 ANKRD24Q8TF21 1146 aa6.24□□□□□ -1.41
SKP1-212ENST00000523966 SEC31BQ9NQW1 1179 aa6.24□□□□□ -1.41
SKP1-212ENST00000523966 IGSF5Q9NSI5 407 aa6.24□□□□□ -1.41
SKP1-212ENST00000523966 SOX13Q9UN79 622 aa6.24□□□□□ -1.41
SKP1-212ENST00000523966 STARD13Q9Y3M8 1113 aa6.24□□□□□ -1.41
SKP1-212ENST00000523966 PIK3R2O00459 728 aa6.23□□□□□ -1.41
SKP1-212ENST00000523966 ZNF157P51786 506 aaPredicted RBP6.23□□□□□ -1.41
SKP1-212ENST00000523966 AFF1P51825 1210 aaKnown RBP6.23□□□□□ -1.41
SKP1-212ENST00000523966 HNRNPUQ00839 825 aaKnown RBP eCLIP6.23□□□□□ -1.41
SKP1-212ENST00000523966 GNL2Q13823 731 aaKnown RBP6.23□□□□□ -1.41
SKP1-212ENST00000523966 MAP3K11Q16584 847 aa6.23□□□□□ -1.41
SKP1-212ENST00000523966 MSL1Q68DK7 614 aa6.23□□□□□ -1.41
SKP1-212ENST00000523966 C20orf204Q6ZNR8 217 aa6.23□□□□□ -1.41
SKP1-212ENST00000523966 C1orf229Q6ZS94 237 aaPredicted RBP6.23□□□□□ -1.41
SKP1-212ENST00000523966 DCAF11Q8TEB1 546 aa6.23□□□□□ -1.41
SKP1-212ENST00000523966 SLC7A3Q8WY07 619 aa6.23□□□□□ -1.41
SKP1-212ENST00000523966 EMILIN2Q9BXX0 1053 aa6.23□□□□□ -1.41
SKP1-212ENST00000523966 TGIF2Q9GZN2 237 aa6.23□□□□□ -1.41
SKP1-212ENST00000523966 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.23□□□□□ -1.41
SKP1-212ENST00000523966 SPDYE3A6NKU9 549 aa6.22□□□□□ -1.41
SKP1-212ENST00000523966 LINC01387J3KSC0 135 aa6.22□□□□□ -1.41
SKP1-212ENST00000523966 GBP2P32456 591 aaPredicted RBP6.22□□□□□ -1.41
SKP1-212ENST00000523966 ZC3H6P61129 1189 aaKnown RBP6.22□□□□□ -1.41
SKP1-212ENST00000523966 PIP4K2BP78356 416 aa6.22□□□□□ -1.41
SKP1-212ENST00000523966 GSTM4Q03013 218 aa6.22□□□□□ -1.41
SKP1-212ENST00000523966 LRRC14Q15048 493 aa6.22□□□□□ -1.41
SKP1-212ENST00000523966 TRAPPC3LQ5T215 181 aa6.22□□□□□ -1.41
SKP1-212ENST00000523966 VN1R5Q7Z5H4 357 aa6.22□□□□□ -1.41
SKP1-212ENST00000523966 WNT8BQ93098 351 aa6.22□□□□□ -1.41
SKP1-212ENST00000523966 NECAB3Q96P71 396 aaPredicted RBP6.22□□□□□ -1.41
SKP1-212ENST00000523966 CBX8Q9HC52 389 aa6.22□□□□□ -1.41
SKP1-212ENST00000523966 PRDM6Q9NQX0 595 aa6.22□□□□□ -1.41
SKP1-212ENST00000523966 MINDY4BA8MYZ0 360 aa6.21□□□□□ -1.42
SKP1-212ENST00000523966 SHISA8B8ZZ34 492 aa6.21□□□□□ -1.42
SKP1-212ENST00000523966 B3GALT4O96024 378 aa6.21□□□□□ -1.42
SKP1-212ENST00000523966 ESRRAP11474 423 aaPredicted RBP6.21□□□□□ -1.42
SKP1-212ENST00000523966 EPHA1P21709 976 aa6.21□□□□□ -1.42
SKP1-212ENST00000523966 C19orf57Q0VDD7 668 aa6.21□□□□□ -1.42
SKP1-212ENST00000523966 TTBK2Q6IQ55 1244 aa6.21□□□□□ -1.42
SKP1-212ENST00000523966 C8orf86Q6ZUL3 223 aa6.21□□□□□ -1.42
SKP1-212ENST00000523966 METTL16Q86W50 562 aaKnown RBP6.21□□□□□ -1.42
SKP1-212ENST00000523966 MAP4K3Q8IVH8 894 aa6.21□□□□□ -1.42
SKP1-212ENST00000523966 RSRP1Q9BUV0 290 aa6.21□□□□□ -1.42
SKP1-212ENST00000523966 OSGEPQ9NPF4 335 aa6.21□□□□□ -1.42
SKP1-212ENST00000523966 SOX1O00570 391 aaPredicted RBP6.2□□□□□ -1.42
SKP1-212ENST00000523966 CYP11A1P05108 521 aa6.2□□□□□ -1.42
SKP1-212ENST00000523966 CELA3AP09093 270 aa6.2□□□□□ -1.42
SKP1-212ENST00000523966 NME2P22392 152 aa6.2□□□□□ -1.42
SKP1-212ENST00000523966 LIG3P49916 1009 aa6.2□□□□□ -1.42
SKP1-212ENST00000523966 RAC1P63000 192 aa6.2□□□□□ -1.42
SKP1-212ENST00000523966 FAAP100Q0VG06 881 aa6.2□□□□□ -1.42
SKP1-212ENST00000523966 AP3B2Q13367 1082 aa6.2□□□□□ -1.42
SKP1-212ENST00000523966 GRIK5Q16478 980 aa6.2□□□□□ -1.42
SKP1-212ENST00000523966 ZNF423Q2M1K9 1284 aa6.2□□□□□ -1.42
SKP1-212ENST00000523966 TXNDC11Q6PKC3 985 aa6.2□□□□□ -1.42
SKP1-212ENST00000523966 VPS37DQ86XT2 251 aa6.2□□□□□ -1.42
SKP1-212ENST00000523966 DMRTC2Q8IXT2 367 aaPredicted RBP6.2□□□□□ -1.42
SKP1-212ENST00000523966 TMEM74Q96NL1 305 aa6.2□□□□□ -1.42
SKP1-212ENST00000523966 SOX17Q9H6I2 414 aaPredicted RBP6.2□□□□□ -1.42
SKP1-212ENST00000523966 SRA1Q9HD15 236 aaKnown RBP6.2□□□□□ -1.42
SKP1-212ENST00000523966 KBTBD4Q9NVX7 518 aa6.2□□□□□ -1.42
SKP1-212ENST00000523966 INPP5FQ9Y2H2 1132 aa6.2□□□□□ -1.42
SKP1-212ENST00000523966 FSCN2O14926 492 aa6.19□□□□□ -1.42
SKP1-212ENST00000523966 ARNTP27540 789 aa6.19□□□□□ -1.42
SKP1-212ENST00000523966 ZNF394Q53GI3 561 aa6.19□□□□□ -1.42
SKP1-212ENST00000523966 PCNX4Q63HM2 1172 aa6.19□□□□□ -1.42
SKP1-212ENST00000523966 ZNF385CQ66K41 422 aaPredicted RBP6.19□□□□□ -1.42
SKP1-212ENST00000523966 ERMP1Q7Z2K6 904 aa6.19□□□□□ -1.42
SKP1-212ENST00000523966 PODNQ7Z5L7 613 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms