RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 MAP2K2P36507 400 aa23.44■■□□□ 1.34
SPIDR-220ENST00000522900 CTCFP49711 727 aaPredicted RBP23.44■■□□□ 1.34
SPIDR-220ENST00000522900 VGLL2Q8N8G2 317 aa23.44■■□□□ 1.34
SPIDR-220ENST00000522900 ZIC5Q96T25 663 aa23.44■■□□□ 1.34
SPIDR-220ENST00000522900 PCDHAC2Q9Y5I4 1007 aa23.44■■□□□ 1.34
SPIDR-220ENST00000522900 BCAR3O75815 825 aa23.43■■□□□ 1.34
SPIDR-220ENST00000522900 UBTFL1P0CB47 393 aaPredicted RBP23.43■■□□□ 1.34
SPIDR-220ENST00000522900 MMP14P50281 582 aa23.43■■□□□ 1.34
SPIDR-220ENST00000522900 LBX1P52954 281 aa23.43■■□□□ 1.34
SPIDR-220ENST00000522900 TNNQ9UQP3 1299 aa23.43■■□□□ 1.34
SPIDR-220ENST00000522900 PDE8BO95263 885 aa23.42■■□□□ 1.34
SPIDR-220ENST00000522900 FKBP1AP62942 108 aaKnown RBP23.42■■□□□ 1.34
SPIDR-220ENST00000522900 PTPN12Q05209 780 aaKnown RBP23.42■■□□□ 1.34
SPIDR-220ENST00000522900 RGMBQ6NW40 437 aa23.42■■□□□ 1.34
SPIDR-220ENST00000522900 TNS4Q8IZW8 715 aa23.42■■□□□ 1.34
SPIDR-220ENST00000522900 ARHGAP45Q92619 1136 aa23.42■■□□□ 1.34
SPIDR-220ENST00000522900 FAM205AQ6ZU69 1335 aa23.41■■□□□ 1.34
SPIDR-220ENST00000522900 HSPA8P11142 646 aaKnown RBP23.41■■□□□ 1.34
SPIDR-220ENST00000522900 MOB2Q70IA6 237 aa23.41■■□□□ 1.34
SPIDR-220ENST00000522900 FBXO33Q7Z6M2 555 aa23.41■■□□□ 1.34
SPIDR-220ENST00000522900 MEIS3Q99687 375 aa23.41■■□□□ 1.34
SPIDR-220ENST00000522900 FAM155AB1AL88 458 aaPredicted RBP23.4■■□□□ 1.34
SPIDR-220ENST00000522900 DLGAP5Q15398 846 aa23.4■■□□□ 1.34
SPIDR-220ENST00000522900 INTS3Q68E01 1043 aaKnown RBP23.4■■□□□ 1.34
SPIDR-220ENST00000522900 PRDM10Q9NQV6 1147 aa23.4■■□□□ 1.34
SPIDR-220ENST00000522900 IQSEC3Q9UPP2 1182 aaPredicted RBP23.4■■□□□ 1.34
SPIDR-220ENST00000522900 LRRFIP2Q9Y608 721 aaKnown RBP23.4■■□□□ 1.34
SPIDR-220ENST00000522900 THSD7BQ9C0I4 1608 aa23.4■■□□□ 1.34
SPIDR-220ENST00000522900 AOX1Q06278 1338 aa23.39■■□□□ 1.34
SPIDR-220ENST00000522900 KIF16BQ96L93 1317 aa23.39■■□□□ 1.34
SPIDR-220ENST00000522900 EYA2O00167 538 aa23.39■■□□□ 1.33
SPIDR-220ENST00000522900 ATG9AQ7Z3C6 839 aa23.39■■□□□ 1.33
SPIDR-220ENST00000522900 FRAT1Q92837 279 aaPredicted RBP23.39■■□□□ 1.33
SPIDR-220ENST00000522900 BCAMP50895 628 aa23.38■■□□□ 1.33
SPIDR-220ENST00000522900 ZNF157P51786 506 aaPredicted RBP23.38■■□□□ 1.33
SPIDR-220ENST00000522900 CFAP100Q494V2 611 aa23.38■■□□□ 1.33
SPIDR-220ENST00000522900 MTMR14Q8NCE2 650 aa23.38■■□□□ 1.33
SPIDR-220ENST00000522900 PRMT6Q96LA8 375 aaPredicted RBP23.38■■□□□ 1.33
SPIDR-220ENST00000522900 TSKSQ9UJT2 592 aa23.38■■□□□ 1.33
SPIDR-220ENST00000522900 TRIM27P14373 513 aa23.37■■□□□ 1.33
SPIDR-220ENST00000522900 FGFR2P21802 821 aa23.37■■□□□ 1.33
SPIDR-220ENST00000522900 NOGQ13253 232 aa23.37■■□□□ 1.33
SPIDR-220ENST00000522900 MFSD14BQ5SR56 506 aa23.37■■□□□ 1.33
SPIDR-220ENST00000522900 VPS37DQ86XT2 251 aa23.37■■□□□ 1.33
SPIDR-220ENST00000522900 BEGAINQ9BUH8 593 aa23.37■■□□□ 1.33
SPIDR-220ENST00000522900 SIL1Q9H173 461 aa23.37■■□□□ 1.33
SPIDR-220ENST00000522900 UBE2Q2LH0YL09 131 aa23.36■■□□□ 1.33
SPIDR-220ENST00000522900 GRIK5Q16478 980 aa23.36■■□□□ 1.33
SPIDR-220ENST00000522900 CAVIN4Q5BKX8 364 aa23.36■■□□□ 1.33
SPIDR-220ENST00000522900 CCDC102AQ96A19 550 aa23.36■■□□□ 1.33
SPIDR-220ENST00000522900 SPDYE2BA6NHP3 402 aa23.35■■□□□ 1.33
SPIDR-220ENST00000522900 IPO8O15397 1037 aaKnown RBP23.35■■□□□ 1.33
SPIDR-220ENST00000522900 SPDYE6P0CI01 402 aa23.35■■□□□ 1.33
SPIDR-220ENST00000522900 CHAF1AQ13111 956 aaPredicted RBP23.35■■□□□ 1.33
SPIDR-220ENST00000522900 PUM3Q15397 648 aaKnown RBP23.35■■□□□ 1.33
SPIDR-220ENST00000522900 ATF7IPQ6VMQ6 1270 aa23.35■■□□□ 1.33
SPIDR-220ENST00000522900 APOBEC3FQ8IUX4 373 aaKnown RBP23.35■■□□□ 1.33
SPIDR-220ENST00000522900 CLUAP1Q96AJ1 413 aa23.35■■□□□ 1.33
SPIDR-220ENST00000522900 PA2G4Q9UQ80 394 aaKnown RBP23.35■■□□□ 1.33
SPIDR-220ENST00000522900 CLRN2A0PK11 232 aa23.34■■□□□ 1.33
SPIDR-220ENST00000522900 RBM5P52756 815 aaKnown RBP eCLIP23.34■■□□□ 1.33
SPIDR-220ENST00000522900 FKBP1BP68106 108 aa23.34■■□□□ 1.33
SPIDR-220ENST00000522900 KIF23Q02241 960 aaPredicted RBP23.34■■□□□ 1.33
SPIDR-220ENST00000522900 TTF2Q9UNY4 1162 aaKnown RBP23.34■■□□□ 1.33
SPIDR-220ENST00000522900 SLC10A3P09131 477 aa23.33■■□□□ 1.33
SPIDR-220ENST00000522900 IFIT1P09914 478 aaKnown RBP23.33■■□□□ 1.33
SPIDR-220ENST00000522900 DEFB129Q9H1M3 183 aa23.33■■□□□ 1.33
SPIDR-220ENST00000522900 HDAC5Q9UQL6 1122 aa23.33■■□□□ 1.33
SPIDR-220ENST00000522900 FRAT2O75474 233 aaPredicted RBP23.32■■□□□ 1.32
SPIDR-220ENST00000522900 CIAO1O76071 339 aa23.32■■□□□ 1.32
SPIDR-220ENST00000522900 GNAI3P08754 354 aa23.32■■□□□ 1.32
SPIDR-220ENST00000522900 PRKG1Q13976 671 aa23.32■■□□□ 1.32
SPIDR-220ENST00000522900 TTLL12Q14166 644 aaPredicted RBP23.32■■□□□ 1.32
SPIDR-220ENST00000522900 FZD1Q9UP38 647 aa23.32■■□□□ 1.32
SPIDR-220ENST00000522900 RASAL3Q86YV0 1011 aa23.31■■□□□ 1.32
SPIDR-220ENST00000522900 LPIN2Q92539 896 aa23.31■■□□□ 1.32
SPIDR-220ENST00000522900 FBXO3Q9UK99 471 aa23.31■■□□□ 1.32
SPIDR-220ENST00000522900 MYO1BO43795 1136 aa23.3■■□□□ 1.32
SPIDR-220ENST00000522900 CAPN15O75808 1086 aa23.3■■□□□ 1.32
SPIDR-220ENST00000522900 SLC5A1P13866 664 aa23.3■■□□□ 1.32
SPIDR-220ENST00000522900 NF2P35240 595 aa23.3■■□□□ 1.32
SPIDR-220ENST00000522900 VEZTQ9HBM0 779 aa23.3■■□□□ 1.32
SPIDR-220ENST00000522900 CEP126Q9P2H0 1117 aa23.3■■□□□ 1.32
SPIDR-220ENST00000522900 SERPINA10Q9UK55 444 aa23.3■■□□□ 1.32
SPIDR-220ENST00000522900 CSRNP1Q96S65 589 aa23.29■■□□□ 1.32
SPIDR-220ENST00000522900 TDRD3Q9H7E2 651 aaKnown RBP23.29■■□□□ 1.32
SPIDR-220ENST00000522900 COPRSQ9NQ92 184 aa23.29■■□□□ 1.32
SPIDR-220ENST00000522900 PAPPA2Q9BXP8 1791 aa23.29■■□□□ 1.32
SPIDR-220ENST00000522900 IL15P40933 162 aaPredicted RBP23.28■■□□□ 1.32
SPIDR-220ENST00000522900 CRKP46108 304 aa23.28■■□□□ 1.32
SPIDR-220ENST00000522900 ATP2B3Q16720 1220 aa23.28■■□□□ 1.32
SPIDR-220ENST00000522900 ZKSCAN2Q63HK3 967 aa23.28■■□□□ 1.32
SPIDR-220ENST00000522900 DZIP1LQ8IYY4 767 aaKnown RBP23.28■■□□□ 1.32
SPIDR-220ENST00000522900 TMEM57Q8N5G2 664 aa23.28■■□□□ 1.32
SPIDR-220ENST00000522900 ZNF70Q9UC06 446 aaPredicted RBP23.28■■□□□ 1.32
SPIDR-220ENST00000522900 SRGAP3O43295 1099 aa23.27■■□□□ 1.32
SPIDR-220ENST00000522900 CA12O43570 354 aa23.27■■□□□ 1.32
SPIDR-220ENST00000522900 TBC1D22AQ8WUA7 517 aa23.27■■□□□ 1.32
SPIDR-220ENST00000522900 MTX1Q13505 466 aa23.26■■□□□ 1.31
SPIDR-220ENST00000522900 RASA3Q14644 834 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms