RNA–Protein interactions for RNA: ENST00000521550.5

SPIDR-214, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,849 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-214ENST00000521550 LETM1O95202 739 aaPredicted RBP16.66■□□□□ 0.26
SPIDR-214ENST00000521550 DALRD3Q5D0E6 543 aaKnown RBP16.66■□□□□ 0.26
SPIDR-214ENST00000521550 METTL24Q5JXM2 366 aa16.66■□□□□ 0.26
SPIDR-214ENST00000521550 TBC1D9BQ66K14 1250 aa16.66■□□□□ 0.26
SPIDR-214ENST00000521550 BCORQ6W2J9 1755 aa16.65■□□□□ 0.26
SPIDR-214ENST00000521550 CTSWP56202 376 aa16.65■□□□□ 0.26
SPIDR-214ENST00000521550 CCDC173Q0VFZ6 552 aa16.65■□□□□ 0.26
SPIDR-214ENST00000521550 LDHAL6AQ6ZMR3 332 aa16.65■□□□□ 0.26
SPIDR-214ENST00000521550 ARHGAP27Q6ZUM4 889 aa16.65■□□□□ 0.26
SPIDR-214ENST00000521550 GAS2L3Q86XJ1 694 aa16.65■□□□□ 0.26
SPIDR-214ENST00000521550 XAGE2Q96GT9 111 aa16.65■□□□□ 0.26
SPIDR-214ENST00000521550 PUS3Q9BZE2 481 aaKnown RBP16.65■□□□□ 0.26
SPIDR-214ENST00000521550 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.65■□□□□ 0.261e-6■■■■□ 20.4
SPIDR-214ENST00000521550 CNNM1Q9NRU3 951 aa16.65■□□□□ 0.26
SPIDR-214ENST00000521550 TPCN1Q9ULQ1 816 aa16.65■□□□□ 0.26
SPIDR-214ENST00000521550 KIF3AQ9Y496 699 aa16.65■□□□□ 0.26
SPIDR-214ENST00000521550 IRS4O14654 1257 aaPredicted RBP16.64■□□□□ 0.25
SPIDR-214ENST00000521550 CAMTA2O94983 1202 aa16.64■□□□□ 0.25
SPIDR-214ENST00000521550 GPTP24298 496 aa16.64■□□□□ 0.25
SPIDR-214ENST00000521550 FKBP4Q02790 459 aaKnown RBP eCLIP16.64■□□□□ 0.25
SPIDR-214ENST00000521550 LARP1BQ659C4 914 aaKnown RBP16.64■□□□□ 0.25
SPIDR-214ENST00000521550 LARP6Q9BRS8 491 aaKnown RBP16.64■□□□□ 0.25
SPIDR-214ENST00000521550 LARGE1O95461 756 aa16.63■□□□□ 0.25
SPIDR-214ENST00000521550 ITGA6P23229 1130 aa16.63■□□□□ 0.25
SPIDR-214ENST00000521550 TTF1Q15361 905 aaPredicted RBP16.63■□□□□ 0.25
SPIDR-214ENST00000521550 ATP2B3Q16720 1220 aa16.63■□□□□ 0.25
SPIDR-214ENST00000521550 LRSAM1Q6UWE0 723 aa16.63■□□□□ 0.25
SPIDR-214ENST00000521550 USP48Q86UV5 1035 aa16.63■□□□□ 0.25
SPIDR-214ENST00000521550 PANK2Q9BZ23 570 aa16.63■□□□□ 0.25
SPIDR-214ENST00000521550 ANKRD36CQ5JPF3 1778 aa16.63■□□□□ 0.25
SPIDR-214ENST00000521550 DLEC1Q9Y238 1755 aa16.63■□□□□ 0.25
SPIDR-214ENST00000521550 CARMIL3Q8ND23 1372 aa16.63■□□□□ 0.25
SPIDR-214ENST00000521550 UBE2HP62256 183 aa16.63■□□□□ 0.25
SPIDR-214ENST00000521550 HLFQ16534 295 aa16.63■□□□□ 0.25
SPIDR-214ENST00000521550 TTLL11Q8NHH1 800 aa16.63■□□□□ 0.25
SPIDR-214ENST00000521550 SETDB2Q96T68 719 aa16.63■□□□□ 0.25
SPIDR-214ENST00000521550 NDUFB9Q9Y6M9 179 aa16.63■□□□□ 0.25
SPIDR-214ENST00000521550 CCDC129Q6ZRS4 1044 aa16.62■□□□□ 0.25
SPIDR-214ENST00000521550 DHX32Q7L7V1 743 aaKnown RBP16.62■□□□□ 0.25
SPIDR-214ENST00000521550 ZNF512BQ96KM6 892 aaPredicted RBP16.62■□□□□ 0.25
SPIDR-214ENST00000521550 GPBP1L1Q9HC44 474 aaPredicted RBP16.62■□□□□ 0.25
SPIDR-214ENST00000521550 VPS37CA5D8V6 355 aaPredicted RBP16.61■□□□□ 0.25
SPIDR-214ENST00000521550 CYP21A2P08686 494 aa16.61■□□□□ 0.25
SPIDR-214ENST00000521550 C1QTNF8P60827 252 aa16.61■□□□□ 0.25
SPIDR-214ENST00000521550 TOB2Q14106 344 aaPredicted RBP16.61■□□□□ 0.25
SPIDR-214ENST00000521550 PARP10Q53GL7 1025 aa16.61■□□□□ 0.25
SPIDR-214ENST00000521550 NECAB1Q8N987 351 aa16.61■□□□□ 0.25
SPIDR-214ENST00000521550 SEC62Q99442 399 aaKnown RBP16.61■□□□□ 0.25
SPIDR-214ENST00000521550 MTMR6Q9Y217 621 aa16.61■□□□□ 0.25
SPIDR-214ENST00000521550 ANKRD31Q8N7Z5 1873 aa16.61■□□□□ 0.25
SPIDR-214ENST00000521550 NPHP1O15259 732 aa16.61■□□□□ 0.25
SPIDR-214ENST00000521550 UQCRFS1P1P0C7P4 283 aa16.61■□□□□ 0.25
SPIDR-214ENST00000521550 WASHC4Q2M389 1173 aa16.61■□□□□ 0.25
SPIDR-214ENST00000521550 CLEC4GQ6UXB4 293 aa16.61■□□□□ 0.25
SPIDR-214ENST00000521550 ZNF526Q8TF50 670 aaPredicted RBP16.61■□□□□ 0.25
SPIDR-214ENST00000521550 LLPHQ9BRT6 129 aaKnown RBP16.61■□□□□ 0.25
SPIDR-214ENST00000521550 ZNF652Q9Y2D9 606 aa16.61■□□□□ 0.25
SPIDR-214ENST00000521550 RIPOR2Q9Y4F9 1068 aa16.61■□□□□ 0.25
SPIDR-214ENST00000521550 H0YIN7 160 aa16.6■□□□□ 0.25
SPIDR-214ENST00000521550 HSPD1P10809 573 aaKnown RBP16.6■□□□□ 0.25
SPIDR-214ENST00000521550 KRT85P78386 507 aa16.6■□□□□ 0.25
SPIDR-214ENST00000521550 Q6ZUG5 572 aa16.6■□□□□ 0.25
SPIDR-214ENST00000521550 ZNF34Q8IZ26 560 aa16.6■□□□□ 0.25
SPIDR-214ENST00000521550 CCDC85AQ96PX6 553 aaPredicted RBP16.6■□□□□ 0.25
SPIDR-214ENST00000521550 TMEM63CQ9P1W3 806 aa16.6■□□□□ 0.25
SPIDR-214ENST00000521550 MROH5Q6ZUA9 1318 aa16.6■□□□□ 0.25
SPIDR-214ENST00000521550 IMMTQ16891 758 aaKnown RBP16.59■□□□□ 0.25
SPIDR-214ENST00000521550 FOXD4L6Q3SYB3 417 aaPredicted RBP16.59■□□□□ 0.25
SPIDR-214ENST00000521550 PRR5LQ6MZQ0 368 aa16.59■□□□□ 0.25
SPIDR-214ENST00000521550 FOXD4L3Q6VB84 417 aaPredicted RBP16.59■□□□□ 0.25
SPIDR-214ENST00000521550 C2CD5Q86YS7 1000 aa16.59■□□□□ 0.25
SPIDR-214ENST00000521550 APPBP2Q92624 585 aa16.59■□□□□ 0.25
SPIDR-214ENST00000521550 GTF3C6Q969F1 213 aa16.59■□□□□ 0.25
SPIDR-214ENST00000521550 GREM2Q9H772 168 aa16.59■□□□□ 0.25
SPIDR-214ENST00000521550 RBM27Q9P2N5 1060 aaKnown RBP16.59■□□□□ 0.25
SPIDR-214ENST00000521550 MAST3O60307 1309 aa16.59■□□□□ 0.25
SPIDR-214ENST00000521550 SYCE3A1L190 88 aa16.59■□□□□ 0.25
SPIDR-214ENST00000521550 CCDC183Q5T5S1 534 aa16.59■□□□□ 0.25
SPIDR-214ENST00000521550 CNBD1Q8NA66 436 aa16.59■□□□□ 0.25
SPIDR-214ENST00000521550 FAM184AQ8NB25 1140 aa16.59■□□□□ 0.25
SPIDR-214ENST00000521550 UTP14AQ9BVJ6 771 aaKnown RBP16.59■□□□□ 0.25
SPIDR-214ENST00000521550 BRIP1Q9BX63 1249 aa16.59■□□□□ 0.25
SPIDR-214ENST00000521550 RTN4Q9NQC3 1192 aaKnown RBP16.59■□□□□ 0.25
SPIDR-214ENST00000521550 CNPY2Q9Y2B0 182 aa16.59■□□□□ 0.25
SPIDR-214ENST00000521550 MYH3P11055 1940 aa16.58■□□□□ 0.25
SPIDR-214ENST00000521550 SBF1O95248 1867 aa16.58■□□□□ 0.24
SPIDR-214ENST00000521550 PDE8BO95263 885 aa16.58■□□□□ 0.24
SPIDR-214ENST00000521550 PDE6BP35913 854 aa16.58■□□□□ 0.24
SPIDR-214ENST00000521550 HMGN5P82970 282 aaKnown RBP16.58■□□□□ 0.24
SPIDR-214ENST00000521550 CCDC24Q8N4L8 307 aa16.58■□□□□ 0.24
SPIDR-214ENST00000521550 TTLL6Q8N841 843 aa16.58■□□□□ 0.24
SPIDR-214ENST00000521550 TSPY26PQ9H489 355 aa16.58■□□□□ 0.24
SPIDR-214ENST00000521550 ADORA1P30542 326 aa16.57■□□□□ 0.24
SPIDR-214ENST00000521550 ST5P78524 1137 aa16.57■□□□□ 0.24
SPIDR-214ENST00000521550 PUM3Q15397 648 aaKnown RBP16.57■□□□□ 0.24
SPIDR-214ENST00000521550 TCEANC2Q96MN5 208 aa16.57■□□□□ 0.24
SPIDR-214ENST00000521550 PPP1R9BQ96SB3 815 aa16.57■□□□□ 0.24
SPIDR-214ENST00000521550 SCAND2PQ9GZW5 306 aaPredicted RBP16.57■□□□□ 0.24
SPIDR-214ENST00000521550 NUP98P52948 1817 aa16.57■□□□□ 0.24
SPIDR-214ENST00000521550 H3BQV1 296 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms