RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 HDAC5Q9UQL6 1122 aa21.36■■□□□ 1.01
SQLE-205ENST00000521232 FAM205AQ6ZU69 1335 aa21.35■■□□□ 1.01
SQLE-205ENST00000521232 IPO8O15397 1037 aaKnown RBP21.35■■□□□ 1.01
SQLE-205ENST00000521232 GYG1P46976 350 aa21.35■■□□□ 1.01
SQLE-205ENST00000521232 HUNKP57058 714 aa21.35■■□□□ 1.01
SQLE-205ENST00000521232 PTPN12Q05209 780 aaKnown RBP21.35■■□□□ 1.01
SQLE-205ENST00000521232 AIDAQ96BJ3 306 aa21.35■■□□□ 1.01
SQLE-205ENST00000521232 THSD7BQ9C0I4 1608 aa21.34■■□□□ 1.01
SQLE-205ENST00000521232 EYA2O00167 538 aa21.34■■□□□ 1.01
SQLE-205ENST00000521232 BCAR3O75815 825 aa21.34■■□□□ 1.01
SQLE-205ENST00000521232 GRM1Q13255 1194 aa21.34■■□□□ 1.01
SQLE-205ENST00000521232 FBXO33Q7Z6M2 555 aa21.34■■□□□ 1.01
SQLE-205ENST00000521232 MTMR14Q8NCE2 650 aa21.34■■□□□ 1.01
SQLE-205ENST00000521232 AOC2O75106 756 aa21.33■■□□□ 1.01
SQLE-205ENST00000521232 CTCFP49711 727 aaPredicted RBP21.32■■□□□ 1
SQLE-205ENST00000521232 ATF7IPQ6VMQ6 1270 aa21.32■■□□□ 1
SQLE-205ENST00000521232 MEIS3Q99687 375 aa21.32■■□□□ 1
SQLE-205ENST00000521232 FBXO3Q9UK99 471 aa21.32■■□□□ 1
SQLE-205ENST00000521232 SCAF8Q9UPN6 1271 aaKnown RBP21.32■■□□□ 1
SQLE-205ENST00000521232 JAG2Q9Y219 1238 aa21.32■■□□□ 1
SQLE-205ENST00000521232 LRRFIP2Q9Y608 721 aaKnown RBP21.32■■□□□ 1
SQLE-205ENST00000521232 TRIM27P14373 513 aa21.31■■□□□ 1
SQLE-205ENST00000521232 FGFR2P21802 821 aa21.31■■□□□ 1
SQLE-205ENST00000521232 DLGAP5Q15398 846 aa21.31■■□□□ 1
SQLE-205ENST00000521232 CAVIN4Q5BKX8 364 aa21.31■■□□□ 1
SQLE-205ENST00000521232 RGMBQ6NW40 437 aa21.31■■□□□ 1
SQLE-205ENST00000521232 ATG9AQ7Z3C6 839 aa21.31■■□□□ 1
SQLE-205ENST00000521232 GNAI3P08754 354 aa21.3■■□□□ 1
SQLE-205ENST00000521232 FKBP1BP68106 108 aa21.3■■□□□ 1
SQLE-205ENST00000521232 VPS37DQ86XT2 251 aa21.3■■□□□ 1
SQLE-205ENST00000521232 PRDM10Q9NQV6 1147 aa21.3■■□□□ 1
SQLE-205ENST00000521232 F8W031 263 aaPredicted RBP21.29■■□□□ 1
SQLE-205ENST00000521232 CIAO1O76071 339 aa21.29■■□□□ 1
SQLE-205ENST00000521232 NOGQ13253 232 aa21.29■■□□□ 1
SQLE-205ENST00000521232 PUM3Q15397 648 aaKnown RBP21.29■■□□□ 1
SQLE-205ENST00000521232 MFSD14BQ5SR56 506 aa21.29■■□□□ 1
SQLE-205ENST00000521232 APOBEC3FQ8IUX4 373 aaKnown RBP21.29■■□□□ 1
SQLE-205ENST00000521232 FRAT1Q92837 279 aaPredicted RBP21.29■■□□□ 1
SQLE-205ENST00000521232 CCDC102AQ96A19 550 aa21.29■■□□□ 1
SQLE-205ENST00000521232 FAM155AB1AL88 458 aaPredicted RBP21.28■■□□□ 1
SQLE-205ENST00000521232 CFAP100Q494V2 611 aa21.28■■□□□ 1
SQLE-205ENST00000521232 PRAMEF18Q5VWM3 479 aa21.28■■□□□ 1
SQLE-205ENST00000521232 ZBED9Q6R2W3 1325 aa21.28■■□□□ 1
SQLE-205ENST00000521232 SPDYE2BA6NHP3 402 aa21.27■■□□□ 1
SQLE-205ENST00000521232 IFIT1P09914 478 aaKnown RBP21.27■■□□□ 1
SQLE-205ENST00000521232 SPDYE6P0CI01 402 aa21.27■■□□□ 1
SQLE-205ENST00000521232 BCAMP50895 628 aa21.27■■□□□ 1
SQLE-205ENST00000521232 ZNF157P51786 506 aaPredicted RBP21.27■■□□□ 1
SQLE-205ENST00000521232 LPIN2Q92539 896 aa21.27■■□□□ 1
SQLE-205ENST00000521232 PRMT6Q96LA8 375 aaPredicted RBP21.27■■□□□ 1
SQLE-205ENST00000521232 BEGAINQ9BUH8 593 aa21.27■■□□□ 1
SQLE-205ENST00000521232 COPRSQ9NQ92 184 aa21.27■■□□□ 1
SQLE-205ENST00000521232 TNNQ9UQP3 1299 aa21.27■■□□□ 1
SQLE-205ENST00000521232 PCDHAC2Q9Y5I4 1007 aa21.27■■□□□ 1
SQLE-205ENST00000521232 HSPA8P11142 646 aaKnown RBP21.26■□□□□ 0.99
SQLE-205ENST00000521232 LBX1P52954 281 aa21.26■□□□□ 0.99
SQLE-205ENST00000521232 ZIC5Q96T25 663 aa21.26■□□□□ 0.99
SQLE-205ENST00000521232 SIL1Q9H173 461 aa21.26■□□□□ 0.99
SQLE-205ENST00000521232 IQSEC3Q9UPP2 1182 aaPredicted RBP21.26■□□□□ 0.99
SQLE-205ENST00000521232 ECM29Q5VYK3 1845 aa21.26■□□□□ 0.99
SQLE-205ENST00000521232 PAPPA2Q9BXP8 1791 aa21.25■□□□□ 0.99
SQLE-205ENST00000521232 MYO1BO43795 1136 aa21.25■□□□□ 0.99
SQLE-205ENST00000521232 SLC5A1P13866 664 aa21.25■□□□□ 0.99
SQLE-205ENST00000521232 IL15P40933 162 aaPredicted RBP21.25■□□□□ 0.99
SQLE-205ENST00000521232 MTX1Q13505 466 aa21.25■□□□□ 0.99
SQLE-205ENST00000521232 ZKSCAN2Q63HK3 967 aa21.25■□□□□ 0.99
SQLE-205ENST00000521232 TNS4Q8IZW8 715 aa21.25■□□□□ 0.99
SQLE-205ENST00000521232 TBC1D22AQ8WUA7 517 aa21.25■□□□□ 0.99
SQLE-205ENST00000521232 CEP126Q9P2H0 1117 aa21.25■□□□□ 0.99
SQLE-205ENST00000521232 SERPINA10Q9UK55 444 aa21.25■□□□□ 0.99
SQLE-205ENST00000521232 TTF2Q9UNY4 1162 aaKnown RBP21.25■□□□□ 0.99
SQLE-205ENST00000521232 FRAT2O75474 233 aaPredicted RBP21.24■□□□□ 0.99
SQLE-205ENST00000521232 NF2P35240 595 aa21.24■□□□□ 0.99
SQLE-205ENST00000521232 CLUAP1Q96AJ1 413 aa21.24■□□□□ 0.99
SQLE-205ENST00000521232 DEFB129Q9H1M3 183 aa21.24■□□□□ 0.99
SQLE-205ENST00000521232 PA2G4Q9UQ80 394 aaKnown RBP21.24■□□□□ 0.99
SQLE-205ENST00000521232 SLC10A3P09131 477 aa21.23■□□□□ 0.99
SQLE-205ENST00000521232 RBM5P52756 815 aaKnown RBP eCLIP21.23■□□□□ 0.99
SQLE-205ENST00000521232 MOB2Q70IA6 237 aa21.23■□□□□ 0.99
SQLE-205ENST00000521232 COL1A1P02452 1464 aaPredicted RBP21.23■□□□□ 0.99
SQLE-205ENST00000521232 ARAP2Q8WZ64 1704 aa21.22■□□□□ 0.99
SQLE-205ENST00000521232 UBE2Q2LH0YL09 131 aa21.22■□□□□ 0.99
SQLE-205ENST00000521232 SRGAP3O43295 1099 aa21.22■□□□□ 0.99
SQLE-205ENST00000521232 CA12O43570 354 aa21.22■□□□□ 0.99
SQLE-205ENST00000521232 GNAI2P04899 355 aa21.22■□□□□ 0.99
SQLE-205ENST00000521232 CHAF1AQ13111 956 aaPredicted RBP21.22■□□□□ 0.99
SQLE-205ENST00000521232 GRIK5Q16478 980 aa21.22■□□□□ 0.99
SQLE-205ENST00000521232 TMEM57Q8N5G2 664 aa21.22■□□□□ 0.99
SQLE-205ENST00000521232 PPP2R3BQ9Y5P8 575 aa21.22■□□□□ 0.99
SQLE-205ENST00000521232 AOX1Q06278 1338 aa21.22■□□□□ 0.99
SQLE-205ENST00000521232 CLRN2A0PK11 232 aa21.21■□□□□ 0.99
SQLE-205ENST00000521232 HDLBPQ00341 1268 aaKnown RBP21.21■□□□□ 0.99
SQLE-205ENST00000521232 KIF23Q02241 960 aaPredicted RBP21.21■□□□□ 0.99
SQLE-205ENST00000521232 ATP2B3Q16720 1220 aa21.21■□□□□ 0.99
SQLE-205ENST00000521232 MRIQ9BWK5 157 aa21.21■□□□□ 0.99
SQLE-205ENST00000521232 SUGT1Q9Y2Z0 365 aa21.21■□□□□ 0.99
SQLE-205ENST00000521232 CRKP46108 304 aa21.2■□□□□ 0.98
SQLE-205ENST00000521232 TTLL12Q14166 644 aaPredicted RBP21.2■□□□□ 0.98
SQLE-205ENST00000521232 RASAL3Q86YV0 1011 aa21.2■□□□□ 0.98
SQLE-205ENST00000521232 DZIP1LQ8IYY4 767 aaKnown RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms