RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 H3BRB1 525 aa8.48□□□□□ -1.05
CTHRC1-204ENST00000520880 PREPP48147 710 aa8.48□□□□□ -1.05
CTHRC1-204ENST00000520880 IKBKEQ14164 716 aa8.48□□□□□ -1.05
CTHRC1-204ENST00000520880 MYRFLQ96LU7 910 aa8.48□□□□□ -1.05
CTHRC1-204ENST00000520880 ARID3AQ99856 593 aa8.48□□□□□ -1.05
CTHRC1-204ENST00000520880 RUSC1Q9BVN2 902 aa8.48□□□□□ -1.05
CTHRC1-204ENST00000520880 RNF208Q9H0X6 261 aa8.48□□□□□ -1.05
CTHRC1-204ENST00000520880 TUT1Q9H6E5 874 aaKnown RBP8.48□□□□□ -1.05
CTHRC1-204ENST00000520880 METTL12A8MUP2 240 aa8.47□□□□□ -1.05
CTHRC1-204ENST00000520880 IGLV1-40P01703 118 aa8.47□□□□□ -1.05
CTHRC1-204ENST00000520880 ARL4DP49703 201 aa8.47□□□□□ -1.05
CTHRC1-204ENST00000520880 B4GALNT3Q6L9W6 998 aa8.47□□□□□ -1.05
CTHRC1-204ENST00000520880 HMX2A2RU54 273 aa8.46□□□□□ -1.06
CTHRC1-204ENST00000520880 ARHGAP4P98171 946 aa8.46□□□□□ -1.06
CTHRC1-204ENST00000520880 ANKRD34AQ69YU3 496 aa8.46□□□□□ -1.06
CTHRC1-204ENST00000520880 GLYCTKQ8IVS8 523 aa8.46□□□□□ -1.06
CTHRC1-204ENST00000520880 TRIM42Q8IWZ5 723 aa8.46□□□□□ -1.06
CTHRC1-204ENST00000520880 KRTAP4-8Q9BYQ9 185 aa8.46□□□□□ -1.06
CTHRC1-204ENST00000520880 C7orf69Q9H7B7 122 aa8.46□□□□□ -1.06
CTHRC1-204ENST00000520880 GSC2O15499 205 aa8.45□□□□□ -1.06
CTHRC1-204ENST00000520880 ESRRAP11474 423 aaPredicted RBP8.45□□□□□ -1.06
CTHRC1-204ENST00000520880 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.45□□□□□ -1.06
CTHRC1-204ENST00000520880 FAM20CQ8IXL6 584 aa8.45□□□□□ -1.06
CTHRC1-204ENST00000520880 BRPF3Q9ULD4 1205 aa8.45□□□□□ -1.06
CTHRC1-204ENST00000520880 SART1O43290 800 aaKnown RBP8.44□□□□□ -1.06
CTHRC1-204ENST00000520880 TGFB1P01137 390 aa8.44□□□□□ -1.06
CTHRC1-204ENST00000520880 BMP3P12645 472 aa8.44□□□□□ -1.06
CTHRC1-204ENST00000520880 SSTR4P31391 388 aa8.44□□□□□ -1.06
CTHRC1-204ENST00000520880 NFIAQ12857 509 aa8.44□□□□□ -1.06
CTHRC1-204ENST00000520880 USP26Q9BXU7 913 aa8.44□□□□□ -1.06
CTHRC1-204ENST00000520880 SOX17Q9H6I2 414 aaPredicted RBP8.44□□□□□ -1.06
CTHRC1-204ENST00000520880 LOC100289279A0A1B0GTE1 492 aa8.43□□□□□ -1.06
CTHRC1-204ENST00000520880 A0A1W2PP55 124 aa8.43□□□□□ -1.06
CTHRC1-204ENST00000520880 MEGF11A6BM72 1044 aa8.43□□□□□ -1.06
CTHRC1-204ENST00000520880 DLGAP3O95886 979 aa8.43□□□□□ -1.06
CTHRC1-204ENST00000520880 CD97P48960 835 aa8.43□□□□□ -1.06
CTHRC1-204ENST00000520880 USPL1Q5W0Q7 1092 aa8.43□□□□□ -1.06
CTHRC1-204ENST00000520880 FDX2Q6P4F2 183 aa8.43□□□□□ -1.06
CTHRC1-204ENST00000520880 ZDHHC13Q8IUH4 622 aa8.43□□□□□ -1.06
CTHRC1-204ENST00000520880 GALNT12Q8IXK2 581 aa8.43□□□□□ -1.06
CTHRC1-204ENST00000520880 TMPRSS13Q9BYE2 586 aa8.43□□□□□ -1.06
CTHRC1-204ENST00000520880 PCMTD2Q9NV79 361 aa8.43□□□□□ -1.06
CTHRC1-204ENST00000520880 SUPT5HO00267 1087 aaKnown RBP8.42□□□□□ -1.06
CTHRC1-204ENST00000520880 MED26O95402 600 aa8.42□□□□□ -1.06
CTHRC1-204ENST00000520880 RNF43Q68DV7 783 aa8.42□□□□□ -1.06
CTHRC1-204ENST00000520880 TXNDC2Q86VQ3 553 aa8.42□□□□□ -1.06
CTHRC1-204ENST00000520880 CLEC10AQ8IUN9 316 aa8.42□□□□□ -1.06
CTHRC1-204ENST00000520880 CCNJLQ8IV13 435 aa8.42□□□□□ -1.06
CTHRC1-204ENST00000520880 RETREG2Q8NC44 543 aa8.42□□□□□ -1.06
CTHRC1-204ENST00000520880 PSMG3-AS1Q96PY0 264 aa8.42□□□□□ -1.06
CTHRC1-204ENST00000520880 TCF12Q99081 682 aa8.42□□□□□ -1.06
CTHRC1-204ENST00000520880 FAM83CQ9BQN1 747 aa8.42□□□□□ -1.06
CTHRC1-204ENST00000520880 KCNF1Q9H3M0 494 aa8.42□□□□□ -1.06
CTHRC1-204ENST00000520880 A0A096LPE4 126 aa8.41□□□□□ -1.06
CTHRC1-204ENST00000520880 A0A1W2PPZ6 126 aa8.41□□□□□ -1.06
CTHRC1-204ENST00000520880 GRIA4P48058 902 aa8.41□□□□□ -1.06
CTHRC1-204ENST00000520880 GSTM4Q03013 218 aa8.41□□□□□ -1.06
CTHRC1-204ENST00000520880 SPRED3Q2MJR0 410 aa8.41□□□□□ -1.06
CTHRC1-204ENST00000520880 BEND4Q6ZU67 534 aa8.41□□□□□ -1.06
CTHRC1-204ENST00000520880 LIN7BQ9HAP6 207 aa8.41□□□□□ -1.06
CTHRC1-204ENST00000520880 NDUFB5O43674 189 aa8.4□□□□□ -1.06
CTHRC1-204ENST00000520880 ORC1Q13415 861 aa8.4□□□□□ -1.06
CTHRC1-204ENST00000520880 NUTM2GQ5VZR2 741 aa8.4□□□□□ -1.06
CTHRC1-204ENST00000520880 FAM129BQ96TA1 746 aa8.4□□□□□ -1.06
CTHRC1-204ENST00000520880 DBNDD2Q9BQY9 259 aa8.4□□□□□ -1.06
CTHRC1-204ENST00000520880 NRSN2Q9GZP1 204 aa8.4□□□□□ -1.06
CTHRC1-204ENST00000520880 SUGCTQ9HAC7 445 aa8.4□□□□□ -1.06
CTHRC1-204ENST00000520880 HIF3AQ9Y2N7 669 aa8.4□□□□□ -1.06
CTHRC1-204ENST00000520880 GAS2O43903 313 aaKnown RBP8.39□□□□□ -1.07
CTHRC1-204ENST00000520880 TIAF1O95411 115 aa8.39□□□□□ -1.07
CTHRC1-204ENST00000520880 ZNF423Q2M1K9 1284 aa8.39□□□□□ -1.07
CTHRC1-204ENST00000520880 SGO2Q562F6 1265 aa8.39□□□□□ -1.07
CTHRC1-204ENST00000520880 C12orf50Q8NA57 414 aaPredicted RBP8.39□□□□□ -1.07
CTHRC1-204ENST00000520880 SMG8Q8ND04 991 aaKnown RBP8.39□□□□□ -1.07
CTHRC1-204ENST00000520880 CLEC4MQ9H2X3 399 aaPredicted RBP8.39□□□□□ -1.07
CTHRC1-204ENST00000520880 PRR19A6NJB7 356 aa8.38□□□□□ -1.07
CTHRC1-204ENST00000520880 COBLO75128 1261 aa8.38□□□□□ -1.07
CTHRC1-204ENST00000520880 IGHA2P01877 340 aa8.38□□□□□ -1.07
CTHRC1-204ENST00000520880 PCDH1Q08174 1060 aa8.38□□□□□ -1.07
CTHRC1-204ENST00000520880 CYP4F12Q9HCS2 524 aa8.38□□□□□ -1.07
CTHRC1-204ENST00000520880 KIAA1324LA8MWY0 1029 aaPredicted RBP8.37□□□□□ -1.07
CTHRC1-204ENST00000520880 DRD2P14416 443 aa8.37□□□□□ -1.07
CTHRC1-204ENST00000520880 MAP4P27816 1152 aaKnown RBP8.37□□□□□ -1.07
CTHRC1-204ENST00000520880 PDE3BQ13370 1112 aa8.37□□□□□ -1.07
CTHRC1-204ENST00000520880 EXOSC6Q5RKV6 272 aaKnown RBP8.37□□□□□ -1.07
CTHRC1-204ENST00000520880 KIAA0319Q5VV43 1072 aa8.37□□□□□ -1.07
CTHRC1-204ENST00000520880 SHKBP1Q8TBC3 707 aa8.37□□□□□ -1.07
CTHRC1-204ENST00000520880 NPHS2Q9NP85 383 aa8.37□□□□□ -1.07
CTHRC1-204ENST00000520880 GPR182O15218 404 aa8.36□□□□□ -1.07
CTHRC1-204ENST00000520880 CPNE3O75131 537 aaKnown RBP8.36□□□□□ -1.07
CTHRC1-204ENST00000520880 NEFLP07196 543 aa8.36□□□□□ -1.07
CTHRC1-204ENST00000520880 CITED4Q96RK1 184 aa8.36□□□□□ -1.07
CTHRC1-204ENST00000520880 CTSBP07858 339 aa8.35□□□□□ -1.07
CTHRC1-204ENST00000520880 MFSD14AQ96MC6 490 aa8.35□□□□□ -1.07
CTHRC1-204ENST00000520880 EHD4Q9H223 541 aa8.35□□□□□ -1.07
CTHRC1-204ENST00000520880 MAOBP27338 520 aa8.34□□□□□ -1.07
CTHRC1-204ENST00000520880 RXRBP28702 533 aa8.34□□□□□ -1.07
CTHRC1-204ENST00000520880 C2CD4AQ8NCU7 369 aaPredicted RBP8.34□□□□□ -1.07
CTHRC1-204ENST00000520880 TRIM56Q9BRZ2 755 aaKnown RBP8.34□□□□□ -1.07
CTHRC1-204ENST00000520880 NIF3L1Q9GZT8 377 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms