RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 CST9Q5W186 159 aa11.93□□□□□ -0.5
CTNNA1-221ENST00000520339 JARID2Q92833 1246 aaPredicted RBP11.93□□□□□ -0.5
CTNNA1-221ENST00000520339 TSR2Q969E8 191 aaKnown RBP11.93□□□□□ -0.5
CTNNA1-221ENST00000520339 BCL2L13Q9BXK5 485 aa11.93□□□□□ -0.5
CTNNA1-221ENST00000520339 SEC31BQ9NQW1 1179 aa11.93□□□□□ -0.5
CTNNA1-221ENST00000520339 CWC25Q9NXE8 425 aaPredicted RBP11.93□□□□□ -0.5
CTNNA1-221ENST00000520339 TSKSQ9UJT2 592 aa11.93□□□□□ -0.5
CTNNA1-221ENST00000520339 SCN4AP35499 1836 aa11.93□□□□□ -0.5
CTNNA1-221ENST00000520339 CDHR2Q9BYE9 1310 aa11.92□□□□□ -0.5
CTNNA1-221ENST00000520339 C6orf229H3BNL8 230 aa11.92□□□□□ -0.5
CTNNA1-221ENST00000520339 FOXN1O15353 648 aa11.92□□□□□ -0.5
CTNNA1-221ENST00000520339 PDE8AO60658 829 aa11.92□□□□□ -0.5
CTNNA1-221ENST00000520339 IGKV5-2P06315 115 aa11.92□□□□□ -0.5
CTNNA1-221ENST00000520339 KSR2Q6VAB6 950 aa11.92□□□□□ -0.5
CTNNA1-221ENST00000520339 TNS4Q8IZW8 715 aa11.92□□□□□ -0.5
CTNNA1-221ENST00000520339 TBC1D16Q8TBP0 767 aa11.92□□□□□ -0.5
CTNNA1-221ENST00000520339 TRPM4Q8TD43 1214 aa11.92□□□□□ -0.5
CTNNA1-221ENST00000520339 ZMYND15Q9H091 742 aa11.92□□□□□ -0.5
CTNNA1-221ENST00000520339 WBP1LQ9NX94 342 aa11.92□□□□□ -0.5
CTNNA1-221ENST00000520339 CNOT7Q9UIV1 285 aaKnown RBP11.92□□□□□ -0.5
CTNNA1-221ENST00000520339 ABT1Q9ULW3 272 aaKnown RBP11.92□□□□□ -0.5
CTNNA1-221ENST00000520339 MAP3K2Q9Y2U5 619 aa11.92□□□□□ -0.5
CTNNA1-221ENST00000520339 CACNA1SQ13698 1873 aa11.91□□□□□ -0.5
CTNNA1-221ENST00000520339 IL16Q14005 1332 aa11.91□□□□□ -0.5
CTNNA1-221ENST00000520339 SHTN1A0MZ66 631 aa11.91□□□□□ -0.5
CTNNA1-221ENST00000520339 PI4KAP2A4QPH2 592 aa11.91□□□□□ -0.5
CTNNA1-221ENST00000520339 RCCD1A6NED2 376 aa11.91□□□□□ -0.5
CTNNA1-221ENST00000520339 PSMD14O00487 310 aa11.91□□□□□ -0.5
CTNNA1-221ENST00000520339 SKIV2LQ15477 1246 aaKnown RBP11.91□□□□□ -0.5
CTNNA1-221ENST00000520339 CCDC152Q4G0S7 254 aa11.91□□□□□ -0.5
CTNNA1-221ENST00000520339 PI4KAP1Q8N8J0 262 aa11.91□□□□□ -0.5
CTNNA1-221ENST00000520339 DPF2Q92785 391 aa11.91□□□□□ -0.5
CTNNA1-221ENST00000520339 GPR101Q96P66 508 aaPredicted RBP11.91□□□□□ -0.5
CTNNA1-221ENST00000520339 EYA3Q99504 573 aa11.91□□□□□ -0.5
CTNNA1-221ENST00000520339 DBNDD1Q9H9R9 158 aa11.91□□□□□ -0.5
CTNNA1-221ENST00000520339 KCNQ5Q9NR82 932 aa11.91□□□□□ -0.5
CTNNA1-221ENST00000520339 PODXL2Q9NZ53 605 aa11.91□□□□□ -0.5
CTNNA1-221ENST00000520339 ADAMTSL1Q8N6G6 1762 aa11.91□□□□□ -0.5
CTNNA1-221ENST00000520339 WDR33Q9C0J8 1336 aaKnown RBP11.9□□□□□ -0.5
CTNNA1-221ENST00000520339 H7C1D1 291 aa11.9□□□□□ -0.5
CTNNA1-221ENST00000520339 LTBP1Q14766 1721 aa11.9□□□□□ -0.5
CTNNA1-221ENST00000520339 TWISTNBQ3B726 338 aaPredicted RBP11.9□□□□□ -0.5
CTNNA1-221ENST00000520339 NUDT18Q6ZVK8 323 aa11.9□□□□□ -0.5
CTNNA1-221ENST00000520339 G2E3Q7L622 706 aa11.9□□□□□ -0.5
CTNNA1-221ENST00000520339 POLR3EQ9NVU0 708 aa11.9□□□□□ -0.5
CTNNA1-221ENST00000520339 ECE2O60344 883 aa11.89□□□□□ -0.51
CTNNA1-221ENST00000520339 CTCFP49711 727 aaPredicted RBP11.89□□□□□ -0.51
CTNNA1-221ENST00000520339 PACS2Q86VP3 889 aa11.89□□□□□ -0.51
CTNNA1-221ENST00000520339 CCDC85AQ96PX6 553 aaPredicted RBP11.89□□□□□ -0.51
CTNNA1-221ENST00000520339 STK31Q9BXU1 1019 aa11.89□□□□□ -0.51
CTNNA1-221ENST00000520339 GLIS2Q9BZE0 524 aaPredicted RBP11.89□□□□□ -0.51
CTNNA1-221ENST00000520339 ZC3H12CQ9C0D7 883 aaKnown RBP11.89□□□□□ -0.51
CTNNA1-221ENST00000520339 MRS2Q9HD23 443 aa11.89□□□□□ -0.51
CTNNA1-221ENST00000520339 PRDM10Q9NQV6 1147 aa11.89□□□□□ -0.51
CTNNA1-221ENST00000520339 GGA1Q9UJY5 639 aa11.89□□□□□ -0.51
CTNNA1-221ENST00000520339 TLL2Q9Y6L7 1015 aa11.89□□□□□ -0.51
CTNNA1-221ENST00000520339 DUOX1Q9NRD9 1551 aa11.88□□□□□ -0.51
CTNNA1-221ENST00000520339 NEURL1BA8MQ27 555 aa11.88□□□□□ -0.51
CTNNA1-221ENST00000520339 TRIM6-TRIM34B2RNG4 842 aa11.88□□□□□ -0.51
CTNNA1-221ENST00000520339 H7C1W4 665 aa11.88□□□□□ -0.51
CTNNA1-221ENST00000520339 UFL1O94874 794 aa11.88□□□□□ -0.51
CTNNA1-221ENST00000520339 CELF2O95319 508 aaKnown RBP11.88□□□□□ -0.51
CTNNA1-221ENST00000520339 VIL1P09327 827 aaKnown RBP11.88□□□□□ -0.51
CTNNA1-221ENST00000520339 RPS12P25398 132 aaKnown RBP11.88□□□□□ -0.51
CTNNA1-221ENST00000520339 CTSWP56202 376 aa11.88□□□□□ -0.51
CTNNA1-221ENST00000520339 CDC37L1Q7L3B6 337 aa11.88□□□□□ -0.51
CTNNA1-221ENST00000520339 SAMD7Q7Z3H4 446 aa11.88□□□□□ -0.51
CTNNA1-221ENST00000520339 ANKRD18AQ8IVF6 992 aa11.88□□□□□ -0.51
CTNNA1-221ENST00000520339 TTLL11Q8NHH1 800 aa11.88□□□□□ -0.51
CTNNA1-221ENST00000520339 AIDAQ96BJ3 306 aa11.88□□□□□ -0.51
CTNNA1-221ENST00000520339 CAPNS2Q96L46 248 aa11.88□□□□□ -0.51
CTNNA1-221ENST00000520339 KCNK17Q96T54 332 aa11.88□□□□□ -0.51
CTNNA1-221ENST00000520339 ANKIB1Q9P2G1 1089 aa11.88□□□□□ -0.51
CTNNA1-221ENST00000520339 PNMA3Q9UL41 463 aa11.88□□□□□ -0.51
CTNNA1-221ENST00000520339 RTL9Q8NET4 1388 aa11.88□□□□□ -0.51
CTNNA1-221ENST00000520339 C3orf80F5H4A9 247 aa11.87□□□□□ -0.51
CTNNA1-221ENST00000520339 ANP32CO43423 234 aa11.87□□□□□ -0.51
CTNNA1-221ENST00000520339 ECE1P42892 770 aa11.87□□□□□ -0.51
CTNNA1-221ENST00000520339 MAP2K1Q02750 393 aaPredicted RBP11.87□□□□□ -0.51
CTNNA1-221ENST00000520339 NEXNQ0ZGT2 675 aa11.87□□□□□ -0.51
CTNNA1-221ENST00000520339 CWF19L2Q2TBE0 894 aaKnown RBP11.87□□□□□ -0.51
CTNNA1-221ENST00000520339 CYP4F22Q6NT55 531 aa11.87□□□□□ -0.51
CTNNA1-221ENST00000520339 SAPCD2Q86UD0 394 aa11.87□□□□□ -0.51
CTNNA1-221ENST00000520339 USP48Q86UV5 1035 aa11.87□□□□□ -0.51
CTNNA1-221ENST00000520339 WDR63Q8IWG1 891 aa11.87□□□□□ -0.51
CTNNA1-221ENST00000520339 PROCA1Q8NCQ7 364 aaPredicted RBP11.87□□□□□ -0.51
CTNNA1-221ENST00000520339 TATDN2Q93075 761 aa11.87□□□□□ -0.51
CTNNA1-221ENST00000520339 OTUD5Q96G74 571 aa11.87□□□□□ -0.51
CTNNA1-221ENST00000520339 COL4A1P02462 1669 aa11.87□□□□□ -0.51
CTNNA1-221ENST00000520339 PCNTO95613 3336 aa11.86□□□□□ -0.51
CTNNA1-221ENST00000520339 VAMP4O75379 141 aa11.86□□□□□ -0.51
CTNNA1-221ENST00000520339 EGFRP00533 1210 aa11.86□□□□□ -0.51
CTNNA1-221ENST00000520339 ATP2B4P23634 1241 aa11.86□□□□□ -0.51
CTNNA1-221ENST00000520339 FLIIQ13045 1269 aa11.86□□□□□ -0.51
CTNNA1-221ENST00000520339 TBC1D10BQ4KMP7 808 aaPredicted RBP11.86□□□□□ -0.51
CTNNA1-221ENST00000520339 GREM2Q9H772 168 aa11.86□□□□□ -0.51
CTNNA1-221ENST00000520339 BSDC1Q9NW68 430 aaPredicted RBP11.86□□□□□ -0.51
CTNNA1-221ENST00000520339 XDHP47989 1333 aa11.86□□□□□ -0.51
CTNNA1-221ENST00000520339 FANCIQ9NVI1 1328 aa11.86□□□□□ -0.51
CTNNA1-221ENST00000520339 WTIPA6NIX2 430 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms